RNA–Protein interactions for RNA: ENST00000533252.1

CASP4-211, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 215 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-211ENST00000533252 FDX2Q6P4F2 183 aa7.11□□□□□ -1.27
CASP4-211ENST00000533252 LSRQ86X29 649 aaPredicted RBP7.11□□□□□ -1.27
CASP4-211ENST00000533252 SMG8Q8ND04 991 aaKnown RBP7.11□□□□□ -1.27
CASP4-211ENST00000533252 DPH2Q9BQC3 489 aaPredicted RBP7.11□□□□□ -1.27
CASP4-211ENST00000533252 WNT10AQ9GZT5 417 aa7.11□□□□□ -1.27
CASP4-211ENST00000533252 AKTIPQ9H8T0 292 aa7.11□□□□□ -1.27
CASP4-211ENST00000533252 FAM105AQ9NUU6 356 aa7.11□□□□□ -1.27
CASP4-211ENST00000533252 NOP53Q9NZM5 478 aaKnown RBP7.11□□□□□ -1.27
CASP4-211ENST00000533252 ACTL7BQ9Y614 415 aa7.11□□□□□ -1.27
CASP4-211ENST00000533252 UHRF1BP1Q6BDS2 1440 aa7.1□□□□□ -1.27
CASP4-211ENST00000533252 WASHC2CQ9Y4E1 1318 aa7.1□□□□□ -1.27
CASP4-211ENST00000533252 SLC22A31A6NKX4 558 aa7.1□□□□□ -1.27
CASP4-211ENST00000533252 GLB1P16278 677 aa7.1□□□□□ -1.27
CASP4-211ENST00000533252 NOS3P29474 1203 aa7.1□□□□□ -1.27
CASP4-211ENST00000533252 NTF4P34130 210 aa7.1□□□□□ -1.27
CASP4-211ENST00000533252 RING1Q06587 406 aa7.1□□□□□ -1.27
CASP4-211ENST00000533252 C2CD4AQ8NCU7 369 aaPredicted RBP7.1□□□□□ -1.27
CASP4-211ENST00000533252 ACSF2Q96CM8 615 aaPredicted RBP7.1□□□□□ -1.27
CASP4-211ENST00000533252 UBL7Q96S82 380 aaPredicted RBP7.1□□□□□ -1.27
CASP4-211ENST00000533252 PIF1Q9H611 641 aa7.1□□□□□ -1.27
CASP4-211ENST00000533252 TJP2Q9UDY2 1190 aa7.1□□□□□ -1.27
CASP4-211ENST00000533252 STRIP2Q9ULQ0 834 aa7.1□□□□□ -1.27
CASP4-211ENST00000533252 MLH3Q9UHC1 1453 aa7.1□□□□□ -1.27
CASP4-211ENST00000533252 MYO5CQ9NQX4 1742 aa7.1□□□□□ -1.27
CASP4-211ENST00000533252 KIAA1107Q9UPP5 1409 aa7.1□□□□□ -1.27
CASP4-211ENST00000533252 TTC37Q6PGP7 1564 aa7.09□□□□□ -1.27
CASP4-211ENST00000533252 CCDC85CA6NKD9 419 aa7.09□□□□□ -1.27
CASP4-211ENST00000533252 PIK3R2O00459 728 aa7.09□□□□□ -1.27
CASP4-211ENST00000533252 KIF3BO15066 747 aa7.09□□□□□ -1.27
CASP4-211ENST00000533252 ATE1O95260 518 aa7.09□□□□□ -1.27
CASP4-211ENST00000533252 TIAF1O95411 115 aa7.09□□□□□ -1.27
CASP4-211ENST00000533252 SPATA31C1P0DKV0 1188 aa7.09□□□□□ -1.27
CASP4-211ENST00000533252 RAB6AP20340 208 aa7.09□□□□□ -1.27
CASP4-211ENST00000533252 ERVK-24P63145 666 aa7.09□□□□□ -1.27
CASP4-211ENST00000533252 BMS1Q14692 1282 aaKnown RBP7.09□□□□□ -1.27
CASP4-211ENST00000533252 ARSHQ5FYA8 562 aa7.09□□□□□ -1.27
CASP4-211ENST00000533252 OVOS1Q6IE37 1185 aa7.09□□□□□ -1.27
CASP4-211ENST00000533252 CDPF1Q6NVV7 123 aa7.09□□□□□ -1.27
CASP4-211ENST00000533252 CKAP2LQ8IYA6 745 aa7.09□□□□□ -1.27
CASP4-211ENST00000533252 CELF2-AS1Q8N7Q2 184 aa7.09□□□□□ -1.27
CASP4-211ENST00000533252 RNF214Q8ND24 703 aa7.09□□□□□ -1.27
CASP4-211ENST00000533252 DCAF11Q8TEB1 546 aa7.09□□□□□ -1.27
CASP4-211ENST00000533252 XAGE3Q8WTP9 111 aa7.09□□□□□ -1.27
CASP4-211ENST00000533252 WFDC12Q8WWY7 111 aa7.09□□□□□ -1.27
CASP4-211ENST00000533252 ISL2Q96A47 359 aa7.09□□□□□ -1.27
CASP4-211ENST00000533252 LENG1Q96BZ8 264 aaPredicted RBP7.09□□□□□ -1.27
CASP4-211ENST00000533252 HIRIP3Q9BW71 556 aaPredicted RBP7.09□□□□□ -1.27
CASP4-211ENST00000533252 ZSWIM4Q9H7M6 989 aa7.09□□□□□ -1.27
CASP4-211ENST00000533252 SSU72Q9NP77 194 aaKnown RBP7.09□□□□□ -1.27
CASP4-211ENST00000533252 PRKAG3Q9UGI9 489 aa7.09□□□□□ -1.27
CASP4-211ENST00000533252 ZMYM4Q5VZL5 1548 aa7.09□□□□□ -1.27
CASP4-211ENST00000533252 ARHGEF40Q8TER5 1519 aa7.09□□□□□ -1.27
CASP4-211ENST00000533252 TRAPPC8Q9Y2L5 1435 aa7.09□□□□□ -1.28
CASP4-211ENST00000533252 PRR36Q9H6K5 1346 aa7.08□□□□□ -1.28
CASP4-211ENST00000533252 BCORL1Q5H9F3 1711 aa7.08□□□□□ -1.28
CASP4-211ENST00000533252 SART1O43290 800 aaKnown RBP7.08□□□□□ -1.28
CASP4-211ENST00000533252 KLF4O43474 513 aa7.08□□□□□ -1.28
CASP4-211ENST00000533252 APBA3O96018 575 aa7.08□□□□□ -1.28
CASP4-211ENST00000533252 POLR2BP30876 1174 aaKnown RBP7.08□□□□□ -1.28
CASP4-211ENST00000533252 INSM1Q01101 510 aaPredicted RBP7.08□□□□□ -1.28
CASP4-211ENST00000533252 PDE4BQ07343 736 aa7.08□□□□□ -1.28
CASP4-211ENST00000533252 ZYXQ15942 572 aaKnown RBP7.08□□□□□ -1.28
CASP4-211ENST00000533252 LARP1BQ659C4 914 aaKnown RBP7.08□□□□□ -1.28
CASP4-211ENST00000533252 TMEM130Q8N3G9 435 aa7.08□□□□□ -1.28
CASP4-211ENST00000533252 FAM13CQ8NE31 585 aa7.08□□□□□ -1.28
CASP4-211ENST00000533252 MICAL1Q8TDZ2 1067 aa7.08□□□□□ -1.28
CASP4-211ENST00000533252 ATG4CQ96DT6 458 aa7.08□□□□□ -1.28
CASP4-211ENST00000533252 SCARF2Q96GP6 870 aaPredicted RBP7.08□□□□□ -1.28
CASP4-211ENST00000533252 ATXN3LQ9H3M9 355 aa7.08□□□□□ -1.28
CASP4-211ENST00000533252 SUGCTQ9HAC7 445 aa7.08□□□□□ -1.28
CASP4-211ENST00000533252 PIDD1Q9HB75 910 aa7.08□□□□□ -1.28
CASP4-211ENST00000533252 CEP162Q5TB80 1403 aa7.08□□□□□ -1.28
CASP4-211ENST00000533252 ZMYM3Q14202 1370 aa7.08□□□□□ -1.28
CASP4-211ENST00000533252 ADAMTSL3P82987 1691 aa7.07□□□□□ -1.28
CASP4-211ENST00000533252 USP11P51784 963 aa7.07□□□□□ -1.28
CASP4-211ENST00000533252 HNRNPUQ00839 825 aaKnown RBP eCLIP7.07□□□□□ -1.28
CASP4-211ENST00000533252 SGO2Q562F6 1265 aa7.07□□□□□ -1.28
CASP4-211ENST00000533252 CDC37L1Q7L3B6 337 aa7.07□□□□□ -1.28
CASP4-211ENST00000533252 THEMISQ8N1K5 641 aaPredicted RBP7.07□□□□□ -1.28
CASP4-211ENST00000533252 ZNF507Q8TCN5 953 aa7.07□□□□□ -1.28
CASP4-211ENST00000533252 FBLIM1Q8WUP2 373 aa7.07□□□□□ -1.28
CASP4-211ENST00000533252 TMEM40Q8WWA1 233 aa7.07□□□□□ -1.28
CASP4-211ENST00000533252 ARMC5Q96C12 935 aa7.07□□□□□ -1.28
CASP4-211ENST00000533252 MEGF10Q96KG7 1140 aa7.07□□□□□ -1.28
CASP4-211ENST00000533252 SLC9A7Q96T83 725 aa7.07□□□□□ -1.28
CASP4-211ENST00000533252 TRIM55Q9BYV6 548 aa7.07□□□□□ -1.28
CASP4-211ENST00000533252 R3HCC1Q9Y3T6 440 aaKnown RBP7.07□□□□□ -1.28
CASP4-211ENST00000533252 GPATCH8Q9UKJ3 1502 aaKnown RBP7.06□□□□□ -1.28
CASP4-211ENST00000533252 FANCGO15287 622 aa7.06□□□□□ -1.28
CASP4-211ENST00000533252 DYNC1LI2O43237 492 aaPredicted RBP7.06□□□□□ -1.28
CASP4-211ENST00000533252 NFICP08651 508 aa7.06□□□□□ -1.28
CASP4-211ENST00000533252 ACRP10323 421 aa7.06□□□□□ -1.28
CASP4-211ENST00000533252 GIMAP6Q6P9H5 292 aa7.06□□□□□ -1.28
CASP4-211ENST00000533252 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.06□□□□□ -1.28
CASP4-211ENST00000533252 TMEM87BQ96K49 555 aa7.06□□□□□ -1.28
CASP4-211ENST00000533252 KIF2CQ99661 725 aa7.06□□□□□ -1.28
CASP4-211ENST00000533252 OSBPL2Q9H1P3 480 aa7.06□□□□□ -1.28
CASP4-211ENST00000533252 FAM86C1Q9NVL1 165 aa7.06□□□□□ -1.28
CASP4-211ENST00000533252 PCDHB10Q9UN67 800 aa7.06□□□□□ -1.28
CASP4-211ENST00000533252 DAGLAQ9Y4D2 1042 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms