RNA–Protein interactions for RNA: ENST00000533131.5

BDNF-217, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-217ENST00000533131 SMC1AQ14683 1233 aaKnown RBP7.79□□□□□ -1.16
BDNF-217ENST00000533131 SLFN12Q8IYM2 578 aa7.79□□□□□ -1.16
BDNF-217ENST00000533131 AKT1S1Q96B36 256 aa7.79□□□□□ -1.16
BDNF-217ENST00000533131 PDCL3Q9H2J4 239 aa7.79□□□□□ -1.16
BDNF-217ENST00000533131 ARHGEF40Q8TER5 1519 aa7.79□□□□□ -1.16
BDNF-217ENST00000533131 UBA7P41226 1012 aa7.79□□□□□ -1.16
BDNF-217ENST00000533131 CCT2P78371 535 aaKnown RBP7.79□□□□□ -1.16
BDNF-217ENST00000533131 ELF2Q15723 593 aa7.79□□□□□ -1.16
BDNF-217ENST00000533131 UNC5DQ6UXZ4 953 aa7.79□□□□□ -1.16
BDNF-217ENST00000533131 MYLK4Q86YV6 388 aaPredicted RBP7.79□□□□□ -1.16
BDNF-217ENST00000533131 TSPYL6Q8N831 410 aa7.79□□□□□ -1.16
BDNF-217ENST00000533131 PXYLP1Q8TE99 480 aa7.79□□□□□ -1.16
BDNF-217ENST00000533131 NSUN6Q8TEA1 469 aaKnown RBP7.79□□□□□ -1.16
BDNF-217ENST00000533131 SMARCC1Q92922 1105 aaPredicted RBP7.79□□□□□ -1.16
BDNF-217ENST00000533131 FMNL2Q96PY5 1086 aa7.79□□□□□ -1.16
BDNF-217ENST00000533131 BRD9Q9H8M2 597 aa7.79□□□□□ -1.16
BDNF-217ENST00000533131 MAPK8IP1Q9UQF2 711 aa7.79□□□□□ -1.16
BDNF-217ENST00000533131 KIDINS220Q9ULH0 1771 aa7.79□□□□□ -1.16
BDNF-217ENST00000533131 ABCA6Q8N139 1617 aa7.79□□□□□ -1.16
BDNF-217ENST00000533131 USP19O94966 1318 aa7.79□□□□□ -1.16
BDNF-217ENST00000533131 COL9A2Q14055 689 aaPredicted RBP7.79□□□□□ -1.16
BDNF-217ENST00000533131 FKBP15Q5T1M5 1219 aa7.79□□□□□ -1.16
BDNF-217ENST00000533131 KIAA1211Q6ZU35 1233 aa7.79□□□□□ -1.16
BDNF-217ENST00000533131 PASD1Q8IV76 773 aa7.79□□□□□ -1.16
BDNF-217ENST00000533131 SLC26A6Q9BXS9 759 aa7.79□□□□□ -1.16
BDNF-217ENST00000533131 PDRG1Q9NUG6 133 aa7.79□□□□□ -1.16
BDNF-217ENST00000533131 UBAP1Q9NZ09 502 aa7.79□□□□□ -1.16
BDNF-217ENST00000533131 SYCP2Q9BX26 1530 aa7.79□□□□□ -1.16
BDNF-217ENST00000533131 KIF1CO43896 1103 aaKnown RBP7.78□□□□□ -1.16
BDNF-217ENST00000533131 CTSHP09668 335 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 CTCFP49711 727 aaPredicted RBP7.78□□□□□ -1.16
BDNF-217ENST00000533131 AIMP1Q12904 312 aaKnown RBP7.78□□□□□ -1.16
BDNF-217ENST00000533131 CBX2Q14781 532 aaPredicted RBP7.78□□□□□ -1.16
BDNF-217ENST00000533131 KRT24Q2M2I5 525 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 GALNT17Q6IS24 598 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 SWSAP1Q6NVH7 229 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 SLC7A3Q8WY07 619 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 TRIM11Q96F44 468 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 SAGE1Q9NXZ1 904 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 JAG2Q9Y219 1238 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 ATAD2Q6PL18 1390 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 NEO1Q92859 1461 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 SCAF11Q99590 1463 aaKnown RBP7.78□□□□□ -1.16
BDNF-217ENST00000533131 FAM13AO94988 1023 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 EIF4BP23588 611 aaKnown RBP7.78□□□□□ -1.16
BDNF-217ENST00000533131 PAX7P23759 505 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 SAFBQ15424 915 aaKnown RBP eCLIP7.78□□□□□ -1.16
BDNF-217ENST00000533131 SKOR2Q2VWA4 1001 aaPredicted RBP7.78□□□□□ -1.16
BDNF-217ENST00000533131 METTL24Q5JXM2 366 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 CDK19Q9BWU1 502 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 ASPSCR1Q9BZE9 553 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 GINM1Q9NU53 330 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 BLMP54132 1417 aaPredicted RBP7.78□□□□□ -1.16
BDNF-217ENST00000533131 FRMPD2Q68DX3 1309 aaPredicted RBP7.78□□□□□ -1.16
BDNF-217ENST00000533131 EIF2S2P20042 333 aaKnown RBP7.78□□□□□ -1.16
BDNF-217ENST00000533131 MNX1P50219 401 aaPredicted RBP7.78□□□□□ -1.16
BDNF-217ENST00000533131 SKOR1P84550 965 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 FXNQ16595 210 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 WDR45BQ5MNZ6 344 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 PRPF38BQ5VTL8 546 aaKnown RBP7.78□□□□□ -1.16
BDNF-217ENST00000533131 SPATC1Q76KD6 591 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 PI4K2BQ8TCG2 481 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 SDF4Q9BRK5 362 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 DBNDD1Q9H9R9 158 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 IRAK4Q9NWZ3 460 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 COMMD8Q9NX08 183 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 OBP2AQ9NY56 170 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 ZRANB1Q9UGI0 708 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 FBXO10Q9UK96 956 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 PPT2Q9UMR5 302 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 CCP110O43303 1012 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 B3GALNT1O75752 331 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 FMR1Q06787 632 aaKnown RBP eCLIP7.78□□□□□ -1.16
BDNF-217ENST00000533131 FAPQ12884 760 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 LVRNQ6Q4G3 990 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 IQCF2Q8IXL9 164 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 PHC3Q8NDX5 983 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 TRPM4Q8TD43 1214 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 DDX54Q8TDD1 881 aaKnown RBP7.78□□□□□ -1.16
BDNF-217ENST00000533131 CHMP4CQ96CF2 233 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 COG3Q96JB2 828 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 UPF3BQ9BZI7 483 aaKnown RBP7.78□□□□□ -1.16
BDNF-217ENST00000533131 CHCHD3Q9NX63 227 aaKnown RBP7.78□□□□□ -1.16
BDNF-217ENST00000533131 CDV3Q9UKY7 258 aaKnown RBP7.78□□□□□ -1.16
BDNF-217ENST00000533131 ZBTB21Q9ULJ3 1066 aa7.78□□□□□ -1.16
BDNF-217ENST00000533131 ZNF521Q96K83 1311 aa7.77□□□□□ -1.17
BDNF-217ENST00000533131 NOS1P29475 1434 aa7.77□□□□□ -1.17
BDNF-217ENST00000533131 TRAPPC8Q9Y2L5 1435 aa7.77□□□□□ -1.17
BDNF-217ENST00000533131 LRRC10BA6NIK2 292 aa7.77□□□□□ -1.17
BDNF-217ENST00000533131 GRM3Q14832 879 aa7.77□□□□□ -1.17
BDNF-217ENST00000533131 ABCB5Q2M3G0 1257 aa7.77□□□□□ -1.17
BDNF-217ENST00000533131 UVSSAQ2YD98 709 aa7.77□□□□□ -1.17
BDNF-217ENST00000533131 TTC39AQ5SRH9 613 aa7.77□□□□□ -1.17
BDNF-217ENST00000533131 PI16Q6UXB8 463 aa7.77□□□□□ -1.17
BDNF-217ENST00000533131 SPATA5Q8NB90 893 aa7.77□□□□□ -1.17
BDNF-217ENST00000533131 KCT2Q8NC54 265 aa7.77□□□□□ -1.17
BDNF-217ENST00000533131 MSANTD4Q8NCY6 345 aa7.77□□□□□ -1.17
BDNF-217ENST00000533131 SLC39A13Q96H72 371 aa7.77□□□□□ -1.17
BDNF-217ENST00000533131 RBCK1Q9BYM8 510 aa7.77□□□□□ -1.17
BDNF-217ENST00000533131 HELLSQ9NRZ9 838 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms