RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 KANK3Q6NY19 840 aa16.8■□□□□ 0.28
CAPN1-224ENST00000533129 PPFIBP1Q86W92 1011 aa16.8■□□□□ 0.28
CAPN1-224ENST00000533129 TTLL11Q8NHH1 800 aa16.8■□□□□ 0.28
CAPN1-224ENST00000533129 NBPF3Q9H094 633 aa16.8■□□□□ 0.28
CAPN1-224ENST00000533129 ABCB6Q9NP58 842 aa16.8■□□□□ 0.28
CAPN1-224ENST00000533129 CTAGE9A4FU28 777 aa16.79■□□□□ 0.28
CAPN1-224ENST00000533129 PTPREP23469 700 aa16.79■□□□□ 0.28
CAPN1-224ENST00000533129 TAF7LQ5H9L4 462 aa16.79■□□□□ 0.28
CAPN1-224ENST00000533129 NOSTRINQ8IVI9 506 aa16.79■□□□□ 0.28
CAPN1-224ENST00000533129 GOLGA6L1Q8N7Z2 621 aa16.79■□□□□ 0.28
CAPN1-224ENST00000533129 FAM71BQ8TC56 605 aa16.79■□□□□ 0.28
CAPN1-224ENST00000533129 FBXO2Q9UK22 296 aaPredicted RBP16.79■□□□□ 0.28
CAPN1-224ENST00000533129 MYH3P11055 1940 aa16.79■□□□□ 0.28
CAPN1-224ENST00000533129 NOP2P46087 812 aaKnown RBP16.79■□□□□ 0.28
CAPN1-224ENST00000533129 CLEC4GQ6UXB4 293 aa16.79■□□□□ 0.28
CAPN1-224ENST00000533129 CYB5R4Q7L1T6 521 aa16.79■□□□□ 0.28
CAPN1-224ENST00000533129 APTXQ7Z2E3 356 aaKnown RBP16.79■□□□□ 0.28
CAPN1-224ENST00000533129 SYNE4Q8N205 404 aa16.79■□□□□ 0.28
CAPN1-224ENST00000533129 ZNF579Q8NAF0 562 aaKnown RBP16.79■□□□□ 0.28
CAPN1-224ENST00000533129 SPATA20Q8TB22 786 aa16.79■□□□□ 0.28
CAPN1-224ENST00000533129 TMEM87BQ96K49 555 aa16.79■□□□□ 0.28
CAPN1-224ENST00000533129 QTRT2Q9H974 415 aaKnown RBP16.79■□□□□ 0.28
CAPN1-224ENST00000533129 MKRN1Q9UHC7 482 aaKnown RBP16.79■□□□□ 0.28
CAPN1-224ENST00000533129 SERTAD1Q9UHV2 236 aa16.79■□□□□ 0.28
CAPN1-224ENST00000533129 AKAP2Q9Y2D5 859 aa16.79■□□□□ 0.28
CAPN1-224ENST00000533129 POLR2DO15514 142 aaKnown RBP16.78■□□□□ 0.28
CAPN1-224ENST00000533129 ZBTB43O43298 467 aa16.78■□□□□ 0.28
CAPN1-224ENST00000533129 PBX1P40424 430 aa16.78■□□□□ 0.28
CAPN1-224ENST00000533129 WHAMMP3Q1A5X7 153 aa16.78■□□□□ 0.28
CAPN1-224ENST00000533129 KIF4BQ2VIQ3 1234 aa16.78■□□□□ 0.28
CAPN1-224ENST00000533129 ZNF569Q5MCW4 686 aa16.78■□□□□ 0.28
CAPN1-224ENST00000533129 IGSF22Q8N9C0 903 aa16.78■□□□□ 0.28
CAPN1-224ENST00000533129 FAN1Q9Y2M0 1017 aa16.78■□□□□ 0.28
CAPN1-224ENST00000533129 SBF2Q86WG5 1849 aa16.78■□□□□ 0.28
CAPN1-224ENST00000533129 MYO5AQ9Y4I1 1855 aaKnown RBP16.78■□□□□ 0.28
CAPN1-224ENST00000533129 RANBP6O60518 1105 aaKnown RBP16.78■□□□□ 0.28
CAPN1-224ENST00000533129 FECHP22830 423 aa16.78■□□□□ 0.28
CAPN1-224ENST00000533129 ZNF827Q17R98 1081 aa16.78■□□□□ 0.28
CAPN1-224ENST00000533129 FAM182BQ5T319 152 aa16.78■□□□□ 0.28
CAPN1-224ENST00000533129 SUSD4Q5VX71 490 aa16.78■□□□□ 0.28
CAPN1-224ENST00000533129 CCDC51Q96ER9 411 aa16.78■□□□□ 0.28
CAPN1-224ENST00000533129 XAGE2Q96GT9 111 aa16.78■□□□□ 0.28
CAPN1-224ENST00000533129 ACBD3Q9H3P7 528 aa16.78■□□□□ 0.28
CAPN1-224ENST00000533129 TTF2Q9UNY4 1162 aaKnown RBP16.78■□□□□ 0.28
CAPN1-224ENST00000533129 LY75O60449 1722 aa16.78■□□□□ 0.28
CAPN1-224ENST00000533129 ANKRD18BA2A2Z9 1011 aa16.77■□□□□ 0.28
CAPN1-224ENST00000533129 MFAP3LO75121 409 aa16.77■□□□□ 0.28
CAPN1-224ENST00000533129 RBL2Q08999 1139 aa16.77■□□□□ 0.28
CAPN1-224ENST00000533129 CASP8Q14790 479 aa16.77■□□□□ 0.28
CAPN1-224ENST00000533129 HSP90B2PQ58FF3 399 aa16.77■□□□□ 0.28
CAPN1-224ENST00000533129 SPECC1Q5M775 1068 aa16.77■□□□□ 0.28
CAPN1-224ENST00000533129 SLC9C2Q5TAH2 1124 aa16.77■□□□□ 0.28
CAPN1-224ENST00000533129 MICU3Q86XE3 530 aa16.77■□□□□ 0.28
CAPN1-224ENST00000533129 TBC1D10CQ8IV04 446 aa16.77■□□□□ 0.28
CAPN1-224ENST00000533129 PUS3Q9BZE2 481 aaKnown RBP16.77■□□□□ 0.28
CAPN1-224ENST00000533129 MED4Q9NPJ6 270 aa16.77■□□□□ 0.28
CAPN1-224ENST00000533129 RXRAP19793 462 aa16.77■□□□□ 0.28
CAPN1-224ENST00000533129 ITGA6P23229 1130 aa16.77■□□□□ 0.28
CAPN1-224ENST00000533129 SGMS1Q86VZ5 419 aa16.77■□□□□ 0.28
CAPN1-224ENST00000533129 GREM2Q9H772 168 aa16.77■□□□□ 0.28
CAPN1-224ENST00000533129 CCNL1Q9UK58 526 aaPredicted RBP16.77■□□□□ 0.28
CAPN1-224ENST00000533129 NIP7Q9Y221 180 aaKnown RBP eCLIP16.77■□□□□ 0.28
CAPN1-224ENST00000533129 SCN7AQ01118 1682 aa16.77■□□□□ 0.27
CAPN1-224ENST00000533129 GOLGA8AA7E2F4 631 aa16.77■□□□□ 0.27
CAPN1-224ENST00000533129 TEX33O43247 280 aa16.77■□□□□ 0.27
CAPN1-224ENST00000533129 ACTN4O43707 911 aaKnown RBP16.77■□□□□ 0.27
CAPN1-224ENST00000533129 N4BP1O75113 896 aaKnown RBP16.77■□□□□ 0.27
CAPN1-224ENST00000533129 ADORA1P30542 326 aa16.77■□□□□ 0.27
CAPN1-224ENST00000533129 VSNL1P62760 191 aa16.77■□□□□ 0.27
CAPN1-224ENST00000533129 SPATA1Q5VX52 437 aa16.77■□□□□ 0.27
CAPN1-224ENST00000533129 CNGA4Q8IV77 575 aa16.77■□□□□ 0.27
CAPN1-224ENST00000533129 WASF1Q92558 559 aa16.77■□□□□ 0.27
CAPN1-224ENST00000533129 CCDC85AQ96PX6 553 aaPredicted RBP16.77■□□□□ 0.27
CAPN1-224ENST00000533129 CTAGE1Q96RT6 745 aa16.77■□□□□ 0.27
CAPN1-224ENST00000533129 MYO1AQ9UBC5 1043 aa16.77■□□□□ 0.27
CAPN1-224ENST00000533129 CTAGE15A4D2H0 777 aa16.76■□□□□ 0.27
CAPN1-224ENST00000533129 CTAGE8P0CG41 777 aa16.76■□□□□ 0.27
CAPN1-224ENST00000533129 ZAP70P43403 619 aa16.76■□□□□ 0.27
CAPN1-224ENST00000533129 TOB1P50616 345 aaPredicted RBP16.76■□□□□ 0.27
CAPN1-224ENST00000533129 RILPL1Q5EBL4 403 aa16.76■□□□□ 0.27
CAPN1-224ENST00000533129 CTAGE6Q86UF2 777 aa16.76■□□□□ 0.27
CAPN1-224ENST00000533129 CTAGE4Q8IX94 777 aa16.76■□□□□ 0.27
CAPN1-224ENST00000533129 NAPGQ99747 312 aaPredicted RBP16.76■□□□□ 0.27
CAPN1-224ENST00000533129 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.76■□□□□ 0.277e-7■■■■□ 19.9
CAPN1-224ENST00000533129 FAM217BQ9NTX9 383 aaPredicted RBP16.76■□□□□ 0.27
CAPN1-224ENST00000533129 ADD3Q9UEY8 706 aaKnown RBP16.76■□□□□ 0.27
CAPN1-224ENST00000533129 SEMA3EO15041 775 aa16.76■□□□□ 0.27
CAPN1-224ENST00000533129 RPS6KA4O75676 772 aa16.76■□□□□ 0.27
CAPN1-224ENST00000533129 MAGEA9P43362 315 aa16.76■□□□□ 0.27
CAPN1-224ENST00000533129 SSRP1Q08945 709 aaKnown RBP16.76■□□□□ 0.27
CAPN1-224ENST00000533129 SCARF1Q14162 830 aa16.76■□□□□ 0.27
CAPN1-224ENST00000533129 SAFBQ15424 915 aaKnown RBP eCLIP16.76■□□□□ 0.27
CAPN1-224ENST00000533129 SLC35F6Q8N357 371 aa16.76■□□□□ 0.27
CAPN1-224ENST00000533129 DENND2AQ9ULE3 1009 aa16.76■□□□□ 0.27
CAPN1-224ENST00000533129 ITIH6Q6UXX5 1313 aa16.76■□□□□ 0.27
CAPN1-224ENST00000533129 LAMB2P55268 1798 aa16.75■□□□□ 0.27
CAPN1-224ENST00000533129 A0A0U1RQJ8 604 aa16.75■□□□□ 0.27
CAPN1-224ENST00000533129 FMNL1O95466 1100 aaPredicted RBP16.75■□□□□ 0.27
CAPN1-224ENST00000533129 MMP1P03956 469 aa16.75■□□□□ 0.27
CAPN1-224ENST00000533129 GRIN1Q05586 938 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms