RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 HSPA4P34932 840 aa13.27□□□□□ -0.29
TRAPPC4-211ENST00000533012 ATP2B2Q01814 1243 aa13.27□□□□□ -0.29
TRAPPC4-211ENST00000533012 ICA1Q05084 483 aa13.27□□□□□ -0.29
TRAPPC4-211ENST00000533012 C8orf34Q49A92 452 aa13.27□□□□□ -0.29
TRAPPC4-211ENST00000533012 RALYLQ86SE5 291 aaKnown RBP13.27□□□□□ -0.29
TRAPPC4-211ENST00000533012 NCOA7Q8NI08 942 aa13.27□□□□□ -0.29
TRAPPC4-211ENST00000533012 ARHGEF10LQ9HCE6 1279 aa13.27□□□□□ -0.29
TRAPPC4-211ENST00000533012 ZSWIM5Q9P217 1185 aa13.27□□□□□ -0.29
TRAPPC4-211ENST00000533012 KCNH4Q9UQ05 1017 aa13.27□□□□□ -0.29
TRAPPC4-211ENST00000533012 SIPA1L1O43166 1804 aa13.26□□□□□ -0.29
TRAPPC4-211ENST00000533012 KDM4AO75164 1064 aa13.26□□□□□ -0.29
TRAPPC4-211ENST00000533012 EEF2P13639 858 aaKnown RBP13.26□□□□□ -0.29
TRAPPC4-211ENST00000533012 NEDD4P46934 1319 aa13.26□□□□□ -0.29
TRAPPC4-211ENST00000533012 BACE1P56817 501 aa13.26□□□□□ -0.29
TRAPPC4-211ENST00000533012 SREBF2Q12772 1141 aa13.26□□□□□ -0.29
TRAPPC4-211ENST00000533012 KRT32Q14532 448 aa13.26□□□□□ -0.29
TRAPPC4-211ENST00000533012 TSGA10IPQ3SY00 556 aa13.26□□□□□ -0.29
TRAPPC4-211ENST00000533012 CCDC178Q5BJE1 867 aa13.26□□□□□ -0.29
TRAPPC4-211ENST00000533012 FASTKD5Q7L8L6 764 aaKnown RBP13.26□□□□□ -0.29
TRAPPC4-211ENST00000533012 IQCA1Q86XH1 822 aa13.26□□□□□ -0.29
TRAPPC4-211ENST00000533012 SIAH1Q8IUQ4 282 aa13.26□□□□□ -0.29
TRAPPC4-211ENST00000533012 MS4A4AQ96JQ5 239 aa13.26□□□□□ -0.29
TRAPPC4-211ENST00000533012 FEZ1Q99689 392 aa13.26□□□□□ -0.29
TRAPPC4-211ENST00000533012 SH2D4AQ9H788 454 aa13.26□□□□□ -0.29
TRAPPC4-211ENST00000533012 TCP11L1Q9NUJ3 509 aa13.26□□□□□ -0.29
TRAPPC4-211ENST00000533012 MTMR4Q9NYA4 1195 aa13.26□□□□□ -0.29
TRAPPC4-211ENST00000533012 NYAP2Q9P242 653 aa13.26□□□□□ -0.29
TRAPPC4-211ENST00000533012 CLIP2Q9UDT6 1046 aa13.26□□□□□ -0.29
TRAPPC4-211ENST00000533012 CCL15-CCL14A0A0B4J2E2 113 aa13.25□□□□□ -0.29
TRAPPC4-211ENST00000533012 IGKV6D-41A0A0C4DH26 115 aa13.25□□□□□ -0.29
TRAPPC4-211ENST00000533012 TESPA1A2RU30 521 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC4-211ENST00000533012 SEC24BO95487 1268 aa13.25□□□□□ -0.29
TRAPPC4-211ENST00000533012 TTLL1O95922 423 aa13.25□□□□□ -0.29
TRAPPC4-211ENST00000533012 TM4SF4P48230 202 aa13.25□□□□□ -0.29
TRAPPC4-211ENST00000533012 USP14P54578 494 aa13.25□□□□□ -0.29
TRAPPC4-211ENST00000533012 MTMR2Q13614 643 aa13.25□□□□□ -0.29
TRAPPC4-211ENST00000533012 CCL15Q16663 113 aa13.25□□□□□ -0.29
TRAPPC4-211ENST00000533012 OTUD7BQ6GQQ9 843 aa13.25□□□□□ -0.29
TRAPPC4-211ENST00000533012 USP17L2Q6R6M4 530 aa13.25□□□□□ -0.29
TRAPPC4-211ENST00000533012 RASEFQ8IZ41 740 aa13.25□□□□□ -0.29
TRAPPC4-211ENST00000533012 ACER1Q8TDN7 264 aa13.25□□□□□ -0.29
TRAPPC4-211ENST00000533012 KCNB2Q92953 911 aa13.25□□□□□ -0.29
TRAPPC4-211ENST00000533012 CEP95Q96GE4 821 aa13.25□□□□□ -0.29
TRAPPC4-211ENST00000533012 TTC14Q96N46 770 aa13.25□□□□□ -0.29
TRAPPC4-211ENST00000533012 NEK1Q96PY6 1258 aa13.25□□□□□ -0.29
TRAPPC4-211ENST00000533012 ZIC5Q96T25 663 aa13.25□□□□□ -0.29
TRAPPC4-211ENST00000533012 KIAA1683Q9H0B3 1180 aa13.25□□□□□ -0.29
TRAPPC4-211ENST00000533012 IL17RBQ9NRM6 502 aa13.25□□□□□ -0.29
TRAPPC4-211ENST00000533012 TMOD4Q9NZQ9 345 aa13.25□□□□□ -0.29
TRAPPC4-211ENST00000533012 TMX2Q9Y320 296 aa13.25□□□□□ -0.29
TRAPPC4-211ENST00000533012 TAF6LQ9Y6J9 622 aa13.25□□□□□ -0.29
TRAPPC4-211ENST00000533012 A0A0G2JLL6 359 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC4-211ENST00000533012 SH3D19Q5HYK7 790 aa13.24□□□□□ -0.29
TRAPPC4-211ENST00000533012 STOX1Q6ZVD7 989 aa13.24□□□□□ -0.29
TRAPPC4-211ENST00000533012 PRRT2Q7Z6L0 340 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC4-211ENST00000533012 MKL1Q969V6 931 aa13.24□□□□□ -0.29
TRAPPC4-211ENST00000533012 ZKSCAN3Q9BRR0 538 aa13.24□□□□□ -0.29
TRAPPC4-211ENST00000533012 UBAC1Q9BSL1 405 aa13.24□□□□□ -0.29
TRAPPC4-211ENST00000533012 STX8Q9UNK0 236 aa13.24□□□□□ -0.29
TRAPPC4-211ENST00000533012 PLIN4Q96Q06 1357 aa13.23□□□□□ -0.29
TRAPPC4-211ENST00000533012 A0A1W2PRG0 241 aa13.23□□□□□ -0.29
TRAPPC4-211ENST00000533012 ERICH2A1L162 156 aa13.23□□□□□ -0.29
TRAPPC4-211ENST00000533012 NMT2O60551 498 aa13.23□□□□□ -0.29
TRAPPC4-211ENST00000533012 HMGB1P09429 215 aaKnown RBP13.23□□□□□ -0.29
TRAPPC4-211ENST00000533012 PSMA5P28066 241 aa13.23□□□□□ -0.29
TRAPPC4-211ENST00000533012 MCM5P33992 734 aa13.23□□□□□ -0.29
TRAPPC4-211ENST00000533012 HMGCS2P54868 508 aa13.23□□□□□ -0.29
TRAPPC4-211ENST00000533012 MAP2K1Q02750 393 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC4-211ENST00000533012 SART3Q15020 963 aaKnown RBP13.23□□□□□ -0.29
TRAPPC4-211ENST00000533012 GADL1Q6ZQY3 521 aa13.23□□□□□ -0.29
TRAPPC4-211ENST00000533012 CYB5R4Q7L1T6 521 aa13.23□□□□□ -0.29
TRAPPC4-211ENST00000533012 DGKHQ86XP1 1220 aa13.23□□□□□ -0.29
TRAPPC4-211ENST00000533012 CLEC10AQ8IUN9 316 aa13.23□□□□□ -0.29
TRAPPC4-211ENST00000533012 PROCA1Q8NCQ7 364 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC4-211ENST00000533012 NKX2-3Q8TAU0 364 aa13.23□□□□□ -0.29
TRAPPC4-211ENST00000533012 BRI3BPQ8WY22 251 aa13.23□□□□□ -0.29
TRAPPC4-211ENST00000533012 ZSCAN10Q96SZ4 725 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC4-211ENST00000533012 GOPCQ9HD26 462 aa13.23□□□□□ -0.29
TRAPPC4-211ENST00000533012 EMILIN3Q9NT22 766 aa13.23□□□□□ -0.29
TRAPPC4-211ENST00000533012 SYNPO2Q9UMS6 1093 aa13.23□□□□□ -0.29
TRAPPC4-211ENST00000533012 SNX14Q9Y5W7 946 aa13.23□□□□□ -0.29
TRAPPC4-211ENST00000533012 F5H6K3 240 aa13.22□□□□□ -0.29
TRAPPC4-211ENST00000533012 NOVP48745 357 aa13.22□□□□□ -0.29
TRAPPC4-211ENST00000533012 KLRC3Q07444 240 aa13.22□□□□□ -0.29
TRAPPC4-211ENST00000533012 ZYXQ15942 572 aaKnown RBP13.22□□□□□ -0.29
TRAPPC4-211ENST00000533012 IFNL1Q8IU54 200 aa13.22□□□□□ -0.29
TRAPPC4-211ENST00000533012 MB21D2Q8IYB1 491 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC4-211ENST00000533012 ANKS1AQ92625 1134 aa13.22□□□□□ -0.29
TRAPPC4-211ENST00000533012 PTPN18Q99952 460 aa13.22□□□□□ -0.29
TRAPPC4-211ENST00000533012 BEGAINQ9BUH8 593 aa13.22□□□□□ -0.29
TRAPPC4-211ENST00000533012 VCPKMTQ9H867 229 aa13.22□□□□□ -0.29
TRAPPC4-211ENST00000533012 UPF2Q9HAU5 1272 aaKnown RBP13.22□□□□□ -0.29
TRAPPC4-211ENST00000533012 IFIT3O14879 490 aaKnown RBP13.21□□□□□ -0.29
TRAPPC4-211ENST00000533012 RAD21O60216 631 aa13.21□□□□□ -0.29
TRAPPC4-211ENST00000533012 ALDH1A1P00352 501 aa13.21□□□□□ -0.29
TRAPPC4-211ENST00000533012 TOP1P11387 765 aaKnown RBP13.21□□□□□ -0.29
TRAPPC4-211ENST00000533012 PABPC4Q13310 644 aaKnown RBP eCLIP13.21□□□□□ -0.298e-8■■■■□ 23
TRAPPC4-211ENST00000533012 MOGSQ13724 837 aa13.21□□□□□ -0.29
TRAPPC4-211ENST00000533012 ADCK5Q3MIX3 580 aa13.21□□□□□ -0.29
TRAPPC4-211ENST00000533012 GPAT2Q6NUI2 795 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms