RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 USP17L18D6R9N7 530 aa17.72■□□□□ 0.43
CDC27-209ENST00000532893 USP17L22D6RA61 530 aa17.72■□□□□ 0.43
CDC27-209ENST00000532893 USP17L17D6RBQ6 530 aa17.72■□□□□ 0.43
CDC27-209ENST00000532893 USP17L19D6RCP7 530 aa17.72■□□□□ 0.43
CDC27-209ENST00000532893 USP17L20D6RJB6 530 aa17.72■□□□□ 0.43
CDC27-209ENST00000532893 GH2P01242 217 aa17.72■□□□□ 0.43
CDC27-209ENST00000532893 PTPREP23469 700 aa17.72■□□□□ 0.43
CDC27-209ENST00000532893 RTP1P59025 263 aa17.72■□□□□ 0.43
CDC27-209ENST00000532893 USP17L24Q0WX57 530 aa17.72■□□□□ 0.43
CDC27-209ENST00000532893 LPAR1Q92633 364 aa17.72■□□□□ 0.43
CDC27-209ENST00000532893 CDX2Q99626 313 aaPredicted RBP17.72■□□□□ 0.43
CDC27-209ENST00000532893 HLA-DOAP06340 250 aa17.71■□□□□ 0.43
CDC27-209ENST00000532893 CYP2C19P33261 490 aa17.71■□□□□ 0.43
CDC27-209ENST00000532893 SHHQ15465 462 aa17.71■□□□□ 0.43
CDC27-209ENST00000532893 NPLOC4Q8TAT6 608 aa17.71■□□□□ 0.43
CDC27-209ENST00000532893 SEMA6BQ9H3T3 888 aa17.71■□□□□ 0.43
CDC27-209ENST00000532893 ATP11BQ9Y2G3 1177 aa17.71■□□□□ 0.43
CDC27-209ENST00000532893 MSCO60682 206 aa17.7■□□□□ 0.42
CDC27-209ENST00000532893 DYNLL1P63167 89 aaKnown RBP17.7■□□□□ 0.42
CDC27-209ENST00000532893 TTC39AQ5SRH9 613 aa17.7■□□□□ 0.42
CDC27-209ENST00000532893 GJC2Q5T442 439 aaPredicted RBP17.7■□□□□ 0.42
CDC27-209ENST00000532893 ATF7IPQ6VMQ6 1270 aa17.7■□□□□ 0.42
CDC27-209ENST00000532893 CATSPERGQ6ZRH7 1159 aa17.7■□□□□ 0.42
CDC27-209ENST00000532893 TRMT2AQ8IZ69 625 aaKnown RBP17.7■□□□□ 0.42
CDC27-209ENST00000532893 TRPV1Q8NER1 839 aa17.7■□□□□ 0.42
CDC27-209ENST00000532893 C12orf42Q96LP6 360 aa17.7■□□□□ 0.42
CDC27-209ENST00000532893 FEZ1Q99689 392 aa17.7■□□□□ 0.42
CDC27-209ENST00000532893 BTBD7Q9P203 1132 aa17.7■□□□□ 0.42
CDC27-209ENST00000532893 IVNS1ABPQ9Y6Y0 642 aa17.7■□□□□ 0.42
CDC27-209ENST00000532893 SIPA1L1O43166 1804 aa17.7■□□□□ 0.42
CDC27-209ENST00000532893 PNMA6EA0A0J9YXQ4 647 aa17.69■□□□□ 0.42
CDC27-209ENST00000532893 DNM1LO00429 736 aa17.69■□□□□ 0.42
CDC27-209ENST00000532893 CYP2E1P05181 493 aaPredicted RBP17.69■□□□□ 0.42
CDC27-209ENST00000532893 CT47B1P0C2W7 299 aaPredicted RBP17.69■□□□□ 0.42
CDC27-209ENST00000532893 C9orf50Q5SZB4 431 aa17.69■□□□□ 0.42
CDC27-209ENST00000532893 MAFAQ8NHW3 353 aaPredicted RBP17.69■□□□□ 0.42
CDC27-209ENST00000532893 HOXC6P09630 235 aa17.68■□□□□ 0.42
CDC27-209ENST00000532893 USP14P54578 494 aa17.68■□□□□ 0.42
CDC27-209ENST00000532893 GRB14Q14449 540 aa17.68■□□□□ 0.42
CDC27-209ENST00000532893 RAB3GAP1Q15042 981 aa17.68■□□□□ 0.42
CDC27-209ENST00000532893 CCDC158Q5M9N0 1113 aa17.68■□□□□ 0.42
CDC27-209ENST00000532893 ACER1Q8TDN7 264 aa17.68■□□□□ 0.42
CDC27-209ENST00000532893 GNAI2P04899 355 aa17.67■□□□□ 0.42
CDC27-209ENST00000532893 VCAM1P19320 739 aa17.67■□□□□ 0.42
CDC27-209ENST00000532893 RARSP54136 660 aaKnown RBP17.67■□□□□ 0.42
CDC27-209ENST00000532893 ANO1Q5XXA6 986 aa17.67■□□□□ 0.42
CDC27-209ENST00000532893 SLC39A5Q6ZMH5 540 aa17.67■□□□□ 0.42
CDC27-209ENST00000532893 ARRDC4Q8NCT1 418 aa17.67■□□□□ 0.42
CDC27-209ENST00000532893 BADQ92934 168 aa17.67■□□□□ 0.42
CDC27-209ENST00000532893 DBNDD2Q9BQY9 259 aa17.67■□□□□ 0.42
CDC27-209ENST00000532893 PIH1D3Q9NQM4 214 aaKnown RBP17.67■□□□□ 0.42
CDC27-209ENST00000532893 PRDM5Q9NQX1 630 aaPredicted RBP17.67■□□□□ 0.42
CDC27-209ENST00000532893 MYCNP04198 464 aaPredicted RBP17.66■□□□□ 0.42
CDC27-209ENST00000532893 CYBAP13498 195 aa17.66■□□□□ 0.42
CDC27-209ENST00000532893 CYP7A1P22680 504 aa17.66■□□□□ 0.42
CDC27-209ENST00000532893 ZAP70P43403 619 aa17.66■□□□□ 0.42
CDC27-209ENST00000532893 TATDN1Q6P1N9 297 aa17.66■□□□□ 0.42
CDC27-209ENST00000532893 LBX2Q6XYB7 198 aa17.66■□□□□ 0.42
CDC27-209ENST00000532893 DPP9Q86TI2 863 aa17.66■□□□□ 0.42
CDC27-209ENST00000532893 MYLIPQ8WY64 445 aa17.66■□□□□ 0.42
CDC27-209ENST00000532893 ARHGAP45Q92619 1136 aa17.66■□□□□ 0.42
CDC27-209ENST00000532893 KIAA1683Q9H0B3 1180 aa17.66■□□□□ 0.42
CDC27-209ENST00000532893 SPDYE16A6NNV3 312 aaPredicted RBP17.65■□□□□ 0.42
CDC27-209ENST00000532893 KBTBD13C9JR72 458 aa17.65■□□□□ 0.42
CDC27-209ENST00000532893 IGHA2P01877 340 aa17.65■□□□□ 0.42
CDC27-209ENST00000532893 USP5P45974 858 aa17.65■□□□□ 0.42
CDC27-209ENST00000532893 ABCB5Q2M3G0 1257 aa17.65■□□□□ 0.42
CDC27-209ENST00000532893 CERKLQ49MI3 558 aaPredicted RBP17.65■□□□□ 0.42
CDC27-209ENST00000532893 TNNI3KQ59H18 835 aa17.65■□□□□ 0.42
CDC27-209ENST00000532893 MIGA1Q8NAN2 632 aa17.65■□□□□ 0.42
CDC27-209ENST00000532893 RPAP3Q9H6T3 665 aaPredicted RBP17.65■□□□□ 0.42
CDC27-209ENST00000532893 SERPINB13Q9UIV8 391 aa17.65■□□□□ 0.42
CDC27-209ENST00000532893 FPGT-TNNI3KV9GXZ4 949 aa17.65■□□□□ 0.42
CDC27-209ENST00000532893 TTC28Q96AY4 2481 aa17.64■□□□□ 0.42
CDC27-209ENST00000532893 ZNF316A6NFI3 1004 aaPredicted RBP17.64■□□□□ 0.41
CDC27-209ENST00000532893 TRIM60Q495X7 471 aa17.64■□□□□ 0.41
CDC27-209ENST00000532893 SH3RF1Q7Z6J0 888 aa17.64■□□□□ 0.41
CDC27-209ENST00000532893 TTYH1Q9H313 450 aaPredicted RBP17.64■□□□□ 0.41
CDC27-209ENST00000532893 CABP5Q9NP86 173 aa17.64■□□□□ 0.41
CDC27-209ENST00000532893 GPR108Q9NPR9 543 aa17.64■□□□□ 0.41
CDC27-209ENST00000532893 PRDM6Q9NQX0 595 aa17.64■□□□□ 0.41
CDC27-209ENST00000532893 TRIM43BA6NCK2 446 aa17.63■□□□□ 0.41
CDC27-209ENST00000532893 ADORA2AP29274 412 aa17.63■□□□□ 0.41
CDC27-209ENST00000532893 ADCYAP1R1P41586 468 aa17.63■□□□□ 0.41
CDC27-209ENST00000532893 SMAD3P84022 425 aaKnown RBP17.63■□□□□ 0.41
CDC27-209ENST00000532893 OS9Q13438 667 aaPredicted RBP17.63■□□□□ 0.41
CDC27-209ENST00000532893 PRAMEF19Q5SWL8 479 aa17.63■□□□□ 0.41
CDC27-209ENST00000532893 FERMT2Q96AC1 680 aa17.63■□□□□ 0.41
CDC27-209ENST00000532893 TRIM43Q96BQ3 446 aaPredicted RBP17.63■□□□□ 0.41
CDC27-209ENST00000532893 MOV10L1Q9BXT6 1211 aaKnown RBP17.63■□□□□ 0.41
CDC27-209ENST00000532893 TNNQ9UQP3 1299 aa17.63■□□□□ 0.41
CDC27-209ENST00000532893 MAST2Q6P0Q8 1798 aa17.62■□□□□ 0.41
CDC27-209ENST00000532893 SEPT4O43236 478 aa17.62■□□□□ 0.41
CDC27-209ENST00000532893 STRNO43815 780 aa17.62■□□□□ 0.41
CDC27-209ENST00000532893 COBLO75128 1261 aa17.62■□□□□ 0.41
CDC27-209ENST00000532893 IDH1O75874 414 aaKnown RBP17.62■□□□□ 0.41
CDC27-209ENST00000532893 OLFML2BQ68BL8 750 aa17.62■□□□□ 0.41
CDC27-209ENST00000532893 TTC6Q86TZ1 520 aa17.62■□□□□ 0.41
CDC27-209ENST00000532893 ZNF512BQ96KM6 892 aaPredicted RBP17.62■□□□□ 0.41
CDC27-209ENST00000532893 EHD4Q9H223 541 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms