RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 CCL5P13501 91 aa21.48■■□□□ 1.03
SMG1-203ENST00000532700 AKR1B1P15121 316 aa21.48■■□□□ 1.03
SMG1-203ENST00000532700 HOXD10P28358 340 aa21.48■■□□□ 1.03
SMG1-203ENST00000532700 GCLCP48506 637 aaPredicted RBP21.48■■□□□ 1.03
SMG1-203ENST00000532700 IRX3P78415 501 aaPredicted RBP21.48■■□□□ 1.03
SMG1-203ENST00000532700 Q3C1V9 767 aa21.48■■□□□ 1.03
SMG1-203ENST00000532700 USP17L2Q6R6M4 530 aa21.48■■□□□ 1.03
SMG1-203ENST00000532700 SIAH1Q8IUQ4 282 aa21.48■■□□□ 1.03
SMG1-203ENST00000532700 KBTBD3Q8NAB2 608 aa21.48■■□□□ 1.03
SMG1-203ENST00000532700 C12orf42Q96LP6 360 aa21.48■■□□□ 1.03
SMG1-203ENST00000532700 TMEM106CQ9BVX2 250 aa21.48■■□□□ 1.03
SMG1-203ENST00000532700 UNC93B1Q9H1C4 597 aa21.48■■□□□ 1.03
SMG1-203ENST00000532700 SLC4A4Q9Y6R1 1079 aa21.48■■□□□ 1.03
SMG1-203ENST00000532700 M0R2C6 588 aa21.47■■□□□ 1.03
SMG1-203ENST00000532700 VCAM1P19320 739 aa21.47■■□□□ 1.03
SMG1-203ENST00000532700 PABPC4Q13310 644 aaKnown RBP eCLIP21.47■■□□□ 1.03
SMG1-203ENST00000532700 C12orf60Q5U649 245 aa21.47■■□□□ 1.03
SMG1-203ENST00000532700 FEZ1Q99689 392 aa21.47■■□□□ 1.03
SMG1-203ENST00000532700 KIAA1683Q9H0B3 1180 aa21.47■■□□□ 1.03
SMG1-203ENST00000532700 PORCNQ9H237 461 aa21.47■■□□□ 1.03
SMG1-203ENST00000532700 GJD2Q9UKL4 321 aa21.47■■□□□ 1.03
SMG1-203ENST00000532700 TRIM32Q13049 653 aa21.46■■□□□ 1.03
SMG1-203ENST00000532700 CTR9Q6PD62 1173 aa21.46■■□□□ 1.03
SMG1-203ENST00000532700 STRBPQ96SI9 672 aaKnown RBP21.46■■□□□ 1.03
SMG1-203ENST00000532700 SEC62Q99442 399 aaKnown RBP21.46■■□□□ 1.03
SMG1-203ENST00000532700 EPB41L4AQ9HCS5 686 aaPredicted RBP21.46■■□□□ 1.03
SMG1-203ENST00000532700 ATP8A2Q9NTI2 1148 aa21.46■■□□□ 1.03
SMG1-203ENST00000532700 TAOK2Q9UL54 1235 aa21.46■■□□□ 1.03
SMG1-203ENST00000532700 GSG1L2A8MUP6 293 aa21.45■■□□□ 1.02
SMG1-203ENST00000532700 MPHOSPH10O00566 681 aaKnown RBP21.45■■□□□ 1.02
SMG1-203ENST00000532700 INHAP05111 366 aa21.45■■□□□ 1.02
SMG1-203ENST00000532700 PAGR1Q9BTK6 254 aa21.45■■□□□ 1.02
SMG1-203ENST00000532700 CDK8P49336 464 aa21.44■■□□□ 1.02
SMG1-203ENST00000532700 IRF5Q13568 498 aa21.44■■□□□ 1.02
SMG1-203ENST00000532700 SLAIN1Q8ND83 568 aa21.44■■□□□ 1.02
SMG1-203ENST00000532700 CABP5Q9NP86 173 aa21.44■■□□□ 1.02
SMG1-203ENST00000532700 BIN2Q9UBW5 565 aaPredicted RBP21.44■■□□□ 1.02
SMG1-203ENST00000532700 RNF113AO15541 343 aaKnown RBP21.43■■□□□ 1.02
SMG1-203ENST00000532700 ERVK-9P63128 1117 aa21.43■■□□□ 1.02
SMG1-203ENST00000532700 ERVK-24P63145 666 aa21.43■■□□□ 1.02
SMG1-203ENST00000532700 CATSPERGQ6ZRH7 1159 aa21.43■■□□□ 1.02
SMG1-203ENST00000532700 C16orf86Q6ZW13 317 aa21.43■■□□□ 1.02
SMG1-203ENST00000532700 STK11IPQ8N1F8 1099 aa21.43■■□□□ 1.02
SMG1-203ENST00000532700 COA7Q96BR5 231 aa21.43■■□□□ 1.02
SMG1-203ENST00000532700 RPAP3Q9H6T3 665 aaPredicted RBP21.43■■□□□ 1.02
SMG1-203ENST00000532700 BTBD7Q9P203 1132 aa21.43■■□□□ 1.02
SMG1-203ENST00000532700 COL11A1P12107 1806 aaPredicted RBP21.43■■□□□ 1.02
SMG1-203ENST00000532700 PRPF38BQ5VTL8 546 aaKnown RBP21.42■■□□□ 1.02
SMG1-203ENST00000532700 ZSCAN25Q6NSZ9 544 aa21.42■■□□□ 1.02
SMG1-203ENST00000532700 TTC41PQ6P2S7 1318 aa21.42■■□□□ 1.02
SMG1-203ENST00000532700 APPBP2Q92624 585 aa21.42■■□□□ 1.02
SMG1-203ENST00000532700 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.42■■□□□ 1.02
SMG1-203ENST00000532700 RNF208Q9H0X6 261 aa21.42■■□□□ 1.02
SMG1-203ENST00000532700 SPDYE16A6NNV3 312 aaPredicted RBP21.41■■□□□ 1.02
SMG1-203ENST00000532700 USP17L15C9J2P7 530 aa21.41■■□□□ 1.02
SMG1-203ENST00000532700 USP17L13C9JLJ4 530 aa21.41■■□□□ 1.02
SMG1-203ENST00000532700 USP17L11C9JVI0 530 aa21.41■■□□□ 1.02
SMG1-203ENST00000532700 USP17L18D6R9N7 530 aa21.41■■□□□ 1.02
SMG1-203ENST00000532700 USP17L22D6RA61 530 aa21.41■■□□□ 1.02
SMG1-203ENST00000532700 USP17L17D6RBQ6 530 aa21.41■■□□□ 1.02
SMG1-203ENST00000532700 USP17L19D6RCP7 530 aa21.41■■□□□ 1.02
SMG1-203ENST00000532700 USP17L20D6RJB6 530 aa21.41■■□□□ 1.02
SMG1-203ENST00000532700 MX1P20591 662 aa21.41■■□□□ 1.02
SMG1-203ENST00000532700 USP17L24Q0WX57 530 aa21.41■■□□□ 1.02
SMG1-203ENST00000532700 GPRC5AQ8NFJ5 357 aa21.41■■□□□ 1.02
SMG1-203ENST00000532700 PXYLP1Q8TE99 480 aa21.41■■□□□ 1.02
SMG1-203ENST00000532700 GPATCH3Q96I76 525 aa21.41■■□□□ 1.02
SMG1-203ENST00000532700 SWAP70Q9UH65 585 aa21.41■■□□□ 1.02
SMG1-203ENST00000532700 ALPK3Q96L96 1907 aa21.41■■□□□ 1.02
SMG1-203ENST00000532700 FOXP2O15409 715 aa21.4■■□□□ 1.02
SMG1-203ENST00000532700 GPAA1O43292 621 aa21.4■■□□□ 1.02
SMG1-203ENST00000532700 GJB1P08034 283 aa21.4■■□□□ 1.02
SMG1-203ENST00000532700 ANKRD45Q5TZF3 282 aa21.4■■□□□ 1.02
SMG1-203ENST00000532700 TMEM179Q6ZVK1 233 aa21.4■■□□□ 1.02
SMG1-203ENST00000532700 UBE2Q1Q7Z7E8 422 aa21.4■■□□□ 1.02
SMG1-203ENST00000532700 TRIB2Q92519 343 aa21.4■■□□□ 1.02
SMG1-203ENST00000532700 ROBO3Q96MS0 1386 aa21.39■■□□□ 1.02
SMG1-203ENST00000532700 GJA8P48165 433 aa21.39■■□□□ 1.01
SMG1-203ENST00000532700 USP14P54578 494 aa21.39■■□□□ 1.01
SMG1-203ENST00000532700 CCL14Q16627 93 aa21.39■■□□□ 1.01
SMG1-203ENST00000532700 SPICE1Q8N0Z3 855 aa21.39■■□□□ 1.01
SMG1-203ENST00000532700 EXOC6Q8TAG9 804 aa21.39■■□□□ 1.01
SMG1-203ENST00000532700 U2AF1L4Q8WU68 220 aaKnown RBP21.39■■□□□ 1.01
SMG1-203ENST00000532700 USP6NLQ92738 828 aa21.39■■□□□ 1.01
SMG1-203ENST00000532700 CYP2B6P20813 491 aa21.38■■□□□ 1.01
SMG1-203ENST00000532700 UBXN2AP68543 259 aa21.38■■□□□ 1.01
SMG1-203ENST00000532700 ICA1Q05084 483 aa21.38■■□□□ 1.01
SMG1-203ENST00000532700 HDAC1Q13547 482 aaPredicted RBP21.38■■□□□ 1.01
SMG1-203ENST00000532700 CCDC129Q6ZRS4 1044 aa21.38■■□□□ 1.01
SMG1-203ENST00000532700 GPR142Q7Z601 462 aa21.38■■□□□ 1.01
SMG1-203ENST00000532700 FRMPD3Q5JV73 1810 aa21.38■■□□□ 1.01
SMG1-203ENST00000532700 MYH4Q9Y623 1939 aa21.37■■□□□ 1.01
SMG1-203ENST00000532700 GLRX3O76003 335 aaKnown RBP21.37■■□□□ 1.01
SMG1-203ENST00000532700 EEF2P13639 858 aaKnown RBP21.37■■□□□ 1.01
SMG1-203ENST00000532700 RASA1P20936 1047 aa21.37■■□□□ 1.01
SMG1-203ENST00000532700 SBK1Q52WX2 424 aa21.37■■□□□ 1.01
SMG1-203ENST00000532700 ZMYM1Q5SVZ6 1142 aa21.37■■□□□ 1.01
SMG1-203ENST00000532700 MORN1Q5T089 497 aa21.37■■□□□ 1.01
SMG1-203ENST00000532700 DEFB118Q96PH6 123 aa21.37■■□□□ 1.01
SMG1-203ENST00000532700 PAK6Q9NQU5 681 aaPredicted RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms