RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 CYP27B1O15528 508 aa9.75□□□□□ -0.85
CTNND1-232ENST00000532649 GSPT1P15170 499 aaKnown RBP9.75□□□□□ -0.85
CTNND1-232ENST00000532649 CERKLQ49MI3 558 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-232ENST00000532649 HSPD1P10809 573 aaKnown RBP9.75□□□□□ -0.85
CTNND1-232ENST00000532649 UBXN1Q04323 297 aa9.75□□□□□ -0.85
CTNND1-232ENST00000532649 GEN1Q17RS7 908 aa9.75□□□□□ -0.85
CTNND1-232ENST00000532649 DCAF17Q5H9S7 520 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-232ENST00000532649 KRT40Q6A162 431 aa9.75□□□□□ -0.85
CTNND1-232ENST00000532649 CHURC1Q8WUH1 139 aa9.75□□□□□ -0.85
CTNND1-232ENST00000532649 TTC14Q96N46 770 aa9.75□□□□□ -0.85
CTNND1-232ENST00000532649 ZSCAN10Q96SZ4 725 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-232ENST00000532649 NCAPGQ9BPX3 1015 aa9.75□□□□□ -0.85
CTNND1-232ENST00000532649 PAGR1Q9BTK6 254 aa9.75□□□□□ -0.85
CTNND1-232ENST00000532649 DBNDD1Q9H9R9 158 aa9.75□□□□□ -0.85
CTNND1-232ENST00000532649 VPS54Q9P1Q0 977 aa9.75□□□□□ -0.85
CTNND1-232ENST00000532649 CLTCQ00610 1675 aaKnown RBP9.75□□□□□ -0.85
CTNND1-232ENST00000532649 BBOX1O75936 387 aa9.75□□□□□ -0.85
CTNND1-232ENST00000532649 SLC8A3P57103 927 aa9.75□□□□□ -0.85
CTNND1-232ENST00000532649 TMC4Q7Z404 712 aa9.75□□□□□ -0.85
CTNND1-232ENST00000532649 HAUS2Q9NVX0 235 aa9.75□□□□□ -0.85
CTNND1-232ENST00000532649 FRMPD2Q68DX3 1309 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-232ENST00000532649 GNG11P61952 73 aa9.75□□□□□ -0.85
CTNND1-232ENST00000532649 PTH1RQ03431 593 aa9.75□□□□□ -0.85
CTNND1-232ENST00000532649 NEK11Q8NG66 645 aa9.75□□□□□ -0.85
CTNND1-232ENST00000532649 ARHGEF35A5YM69 484 aa9.74□□□□□ -0.85
CTNND1-232ENST00000532649 RPL13P26373 211 aaKnown RBP9.74□□□□□ -0.85
CTNND1-232ENST00000532649 SMTNP53814 917 aa9.74□□□□□ -0.85
CTNND1-232ENST00000532649 FAM160A1Q05DH4 1040 aa9.74□□□□□ -0.85
CTNND1-232ENST00000532649 RASA3Q14644 834 aa9.74□□□□□ -0.85
CTNND1-232ENST00000532649 LRRC47Q8N1G4 583 aaKnown RBP9.74□□□□□ -0.85
CTNND1-232ENST00000532649 CALCOCO1Q9P1Z2 691 aa9.74□□□□□ -0.85
CTNND1-232ENST00000532649 DBNLQ9UJU6 430 aaKnown RBP9.74□□□□□ -0.85
CTNND1-232ENST00000532649 JAK2O60674 1132 aa9.74□□□□□ -0.85
CTNND1-232ENST00000532649 PDE4DQ08499 809 aa9.74□□□□□ -0.85
CTNND1-232ENST00000532649 SPOUT1Q5T280 376 aaKnown RBP9.74□□□□□ -0.85
CTNND1-232ENST00000532649 FAM173BQ6P4H8 233 aa9.74□□□□□ -0.85
CTNND1-232ENST00000532649 TLR7Q9NYK1 1049 aaKnown RBP9.74□□□□□ -0.85
CTNND1-232ENST00000532649 GINS2Q9Y248 185 aa9.74□□□□□ -0.85
CTNND1-232ENST00000532649 ATP10DQ9P241 1426 aa9.74□□□□□ -0.85
CTNND1-232ENST00000532649 RNF123Q5XPI4 1314 aa9.74□□□□□ -0.85
CTNND1-232ENST00000532649 CLRN2A0PK11 232 aa9.74□□□□□ -0.85
CTNND1-232ENST00000532649 GSDMBQ8TAX9 411 aa9.74□□□□□ -0.85
CTNND1-232ENST00000532649 LMBR1Q8WVP7 490 aa9.74□□□□□ -0.85
CTNND1-232ENST00000532649 FRMD4BQ9Y2L6 1034 aa9.74□□□□□ -0.85
CTNND1-232ENST00000532649 DKC1O60832 514 aaKnown RBP eCLIP9.74□□□□□ -0.85
CTNND1-232ENST00000532649 TERF1P54274 439 aa9.74□□□□□ -0.85
CTNND1-232ENST00000532649 MAEAQ7L5Y9 396 aa9.74□□□□□ -0.85
CTNND1-232ENST00000532649 REXO1Q8N1G1 1221 aaKnown RBP9.74□□□□□ -0.85
CTNND1-232ENST00000532649 SNX29Q8TEQ0 813 aa9.74□□□□□ -0.85
CTNND1-232ENST00000532649 IFT74Q96LB3 600 aa9.74□□□□□ -0.85
CTNND1-232ENST00000532649 KCNH3Q9ULD8 1083 aa9.74□□□□□ -0.85
CTNND1-232ENST00000532649 TRPM1Q7Z4N2 1603 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 TRAF5O00463 557 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 PLCB3Q01970 1234 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 CALCRLQ16602 461 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 CMTR1Q8N1G2 835 aaKnown RBP9.73□□□□□ -0.85
CTNND1-232ENST00000532649 AZI2Q9H6S1 392 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 LRWD1Q9UFC0 647 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 CROCC2H7BZ55 1655 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 RIMBP3CA6NJZ7 1639 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 RIMBP3BA6NNM3 1639 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 RIMBP3Q9UFD9 1639 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 SEMA3EO15041 775 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 CNGA1P29973 690 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 ICA1Q05084 483 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 GADL1Q6ZQY3 521 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 GABPB2Q8TAK5 448 aaPredicted RBP9.73□□□□□ -0.85
CTNND1-232ENST00000532649 CCDC110Q8TBZ0 833 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 CTNND2Q9UQB3 1225 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 FGAP02671 866 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 ZNF853P0CG23 659 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 FNBP1Q96RU3 617 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 PRDM10Q9NQV6 1147 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 TNKSO95271 1327 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 SMCO2A6NFE2 343 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 POLR2DO15514 142 aaKnown RBP9.73□□□□□ -0.85
CTNND1-232ENST00000532649 ATP2C2O75185 946 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 MMP10P09238 476 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 SUSD4Q5VX71 490 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 CCDC186Q7Z3E2 898 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 PNMA1Q8ND90 353 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 ZNF526Q8TF50 670 aaPredicted RBP9.73□□□□□ -0.85
CTNND1-232ENST00000532649 GPR108Q9NPR9 543 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 TULP4Q9NRJ4 1543 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 HMGB1P1B2RPK0 211 aaPredicted RBP9.73□□□□□ -0.85
CTNND1-232ENST00000532649 UBE3CQ15386 1083 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 NACA2Q9H009 215 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 FAM114A2Q9NRY5 505 aa9.73□□□□□ -0.85
CTNND1-232ENST00000532649 EPB41P11171 864 aaKnown RBP9.72□□□□□ -0.85
CTNND1-232ENST00000532649 SKILP12757 684 aa9.72□□□□□ -0.85
CTNND1-232ENST00000532649 BIRC3Q13489 604 aa9.72□□□□□ -0.85
CTNND1-232ENST00000532649 EP400NLQ6ZTU2 488 aa9.72□□□□□ -0.85
CTNND1-232ENST00000532649 TM6SF1Q9BZW5 370 aa9.72□□□□□ -0.85
CTNND1-232ENST00000532649 TRIM7Q9C029 511 aa9.72□□□□□ -0.85
CTNND1-232ENST00000532649 CAMSAP1Q5T5Y3 1602 aa9.72□□□□□ -0.85
CTNND1-232ENST00000532649 CUTAO60888 179 aa9.72□□□□□ -0.85
CTNND1-232ENST00000532649 ALAS1P13196 640 aa9.72□□□□□ -0.85
CTNND1-232ENST00000532649 CNNM4Q6P4Q7 775 aa9.72□□□□□ -0.85
CTNND1-232ENST00000532649 ZNF830Q96NB3 372 aaPredicted RBP9.72□□□□□ -0.85
CTNND1-232ENST00000532649 NCAPD2Q15021 1401 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms