RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 CCDC15Q0P6D6 951 aa8.94□□□□□ -0.98
CTNND1-231ENST00000532463 RBM26Q5T8P6 1007 aaKnown RBP8.94□□□□□ -0.98
CTNND1-231ENST00000532463 RSAD2Q8WXG1 361 aa8.94□□□□□ -0.98
CTNND1-231ENST00000532463 CCDC8Q9H0W5 538 aaPredicted RBP8.94□□□□□ -0.98
CTNND1-231ENST00000532463 UPF3AQ9H1J1 476 aaKnown RBP8.94□□□□□ -0.98
CTNND1-231ENST00000532463 FGD6Q6ZV73 1430 aa8.93□□□□□ -0.98
CTNND1-231ENST00000532463 IFNA8P32881 189 aa8.93□□□□□ -0.98
CTNND1-231ENST00000532463 FAM133BQ5BKY9 247 aaKnown RBP8.93□□□□□ -0.98
CTNND1-231ENST00000532463 OGFOD1Q8N543 542 aa8.93□□□□□ -0.98
CTNND1-231ENST00000532463 TRIM15Q9C019 465 aa8.93□□□□□ -0.98
CTNND1-231ENST00000532463 PRR23D1E9PI22 279 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-231ENST00000532463 PRR23D2P0DMB1 279 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-231ENST00000532463 RAB44Q7Z6P3 723 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-231ENST00000532463 TLK2Q86UE8 772 aa8.93□□□□□ -0.98
CTNND1-231ENST00000532463 ESR2Q92731 530 aa8.93□□□□□ -0.98
CTNND1-231ENST00000532463 SLC12A5Q9H2X9 1139 aa8.93□□□□□ -0.98
CTNND1-231ENST00000532463 STX8Q9UNK0 236 aa8.93□□□□□ -0.98
CTNND1-231ENST00000532463 SPDYE3A6NKU9 549 aa8.93□□□□□ -0.98
CTNND1-231ENST00000532463 SERPINB2P05120 415 aa8.93□□□□□ -0.98
CTNND1-231ENST00000532463 PSMC1P62191 440 aaKnown RBP8.93□□□□□ -0.98
CTNND1-231ENST00000532463 KMT5BQ4FZB7 885 aa8.93□□□□□ -0.98
CTNND1-231ENST00000532463 TMEM259Q4ZIN3 620 aa8.93□□□□□ -0.98
CTNND1-231ENST00000532463 IFIT1BQ5T764 474 aaKnown RBP8.93□□□□□ -0.98
CTNND1-231ENST00000532463 NCAPH2Q6IBW4 605 aa8.93□□□□□ -0.98
CTNND1-231ENST00000532463 RRP36Q96EU6 259 aaKnown RBP8.93□□□□□ -0.98
CTNND1-231ENST00000532463 CRNKL1Q9BZJ0 848 aaKnown RBP8.93□□□□□ -0.98
CTNND1-231ENST00000532463 SLC13A4Q9UKG4 626 aa8.93□□□□□ -0.98
CTNND1-231ENST00000532463 SLFN5Q08AF3 891 aa8.93□□□□□ -0.98
CTNND1-231ENST00000532463 IFT88Q13099 833 aa8.93□□□□□ -0.98
CTNND1-231ENST00000532463 LONRF2Q1L5Z9 754 aa8.93□□□□□ -0.98
CTNND1-231ENST00000532463 BMP2KLQ5H9B9 411 aa8.93□□□□□ -0.98
CTNND1-231ENST00000532463 BSPRYQ5W0U4 402 aa8.93□□□□□ -0.98
CTNND1-231ENST00000532463 BBOF1Q8ND07 529 aa8.93□□□□□ -0.98
CTNND1-231ENST00000532463 CACTINQ8WUQ7 758 aaKnown RBP8.93□□□□□ -0.98
CTNND1-231ENST00000532463 CDKL2Q92772 493 aa8.93□□□□□ -0.98
CTNND1-231ENST00000532463 NOP53Q9NZM5 478 aaKnown RBP8.93□□□□□ -0.98
CTNND1-231ENST00000532463 ZNF229Q9UJW7 825 aa8.93□□□□□ -0.98
CTNND1-231ENST00000532463 USTQ9Y2C2 406 aa8.93□□□□□ -0.98
CTNND1-231ENST00000532463 SLC4A7Q9Y6M7 1214 aa8.93□□□□□ -0.98
CTNND1-231ENST00000532463 SPDYE16A6NNV3 312 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-231ENST00000532463 CAPN9O14815 690 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 NVLO15381 856 aaKnown RBP8.92□□□□□ -0.98
CTNND1-231ENST00000532463 LMNB1P20700 586 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 SPDYE2Q495Y8 402 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 DTHD1Q6ZMT9 781 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 GINS4Q9BRT9 223 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 TEX12Q9BXU0 123 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 CHCHD3Q9NX63 227 aaKnown RBP8.92□□□□□ -0.98
CTNND1-231ENST00000532463 ATP11BQ9Y2G3 1177 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 SESN1Q9Y6P5 492 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 POLA1P09884 1462 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-231ENST00000532463 DEAF1O75398 565 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-231ENST00000532463 SMTNP53814 917 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 DNM1Q05193 864 aaKnown RBP8.92□□□□□ -0.98
CTNND1-231ENST00000532463 GRIN1Q05586 938 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 SV2BQ7L1I2 683 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 NLRP9Q7RTR0 991 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 SLC24A3Q9HC58 644 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 FGFR1OP2Q9NVK5 253 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 TTLL3Q9Y4R7 772 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 TSPY3P0CV98 308 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 TSPY8P0CW00 308 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 EEF1GP26641 437 aaKnown RBP8.92□□□□□ -0.98
CTNND1-231ENST00000532463 TMED10P49755 219 aaKnown RBP8.92□□□□□ -0.98
CTNND1-231ENST00000532463 HAND2P61296 217 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 BASP1P80723 227 aaKnown RBP8.92□□□□□ -0.98
CTNND1-231ENST00000532463 RINLQ6ZS11 566 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 EP400NLQ6ZTU2 488 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 BRAPQ7Z569 592 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 STX19Q8N4C7 294 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 IQCDQ96DY2 449 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 RIOK1Q9BRS2 568 aaKnown RBP8.92□□□□□ -0.98
CTNND1-231ENST00000532463 THAP12O43422 761 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 CALUO43852 315 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-231ENST00000532463 DKC1O60832 514 aaKnown RBP eCLIP8.92□□□□□ -0.98
CTNND1-231ENST00000532463 RHOBTB1O94844 696 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 FMNL1O95466 1100 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-231ENST00000532463 GUCY2FP51841 1108 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 GSTO1P78417 241 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 CCDC85BQ15834 202 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-231ENST00000532463 KHDRBS2Q5VWX1 349 aaKnown RBP8.92□□□□□ -0.98
CTNND1-231ENST00000532463 ATL3Q6DD88 541 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 GDAP1L1Q96MZ0 367 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 ZRANB1Q9UGI0 708 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 IPO11Q9UI26 975 aaKnown RBP8.92□□□□□ -0.98
CTNND1-231ENST00000532463 PNMA2Q9UL42 364 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 WIZO95785 1651 aa8.92□□□□□ -0.98
CTNND1-231ENST00000532463 GRAMD1BQ3KR37 738 aa8.91□□□□□ -0.98
CTNND1-231ENST00000532463 TBC1D9Q6ZT07 1266 aa8.91□□□□□ -0.98
CTNND1-231ENST00000532463 SESTD1Q86VW0 696 aa8.91□□□□□ -0.98
CTNND1-231ENST00000532463 TEX11Q8IYF3 940 aa8.91□□□□□ -0.98
CTNND1-231ENST00000532463 NECAB1Q8N987 351 aa8.91□□□□□ -0.98
CTNND1-231ENST00000532463 OLFM3Q96PB7 478 aa8.91□□□□□ -0.98
CTNND1-231ENST00000532463 NACA2Q9H009 215 aa8.91□□□□□ -0.98
CTNND1-231ENST00000532463 INTS9Q9NV88 658 aaKnown RBP8.91□□□□□ -0.98
CTNND1-231ENST00000532463 TLK1Q9UKI8 766 aa8.91□□□□□ -0.98
CTNND1-231ENST00000532463 FAM69CQ0P6D2 419 aa8.91□□□□□ -0.98
CTNND1-231ENST00000532463 CNNM4Q6P4Q7 775 aa8.91□□□□□ -0.98
CTNND1-231ENST00000532463 PLEKHM3Q6ZWE6 761 aa8.91□□□□□ -0.98
CTNND1-231ENST00000532463 ARMC2Q8NEN0 867 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms