RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 LAMA4Q16363 1823 aa24.68■■□□□ 1.54
CCS-207ENST00000531990 LOC285556D6RIA3 1793 aa24.68■■□□□ 1.54
CCS-207ENST00000531990 ZNF213O14771 459 aa24.68■■□□□ 1.54
CCS-207ENST00000531990 TBC1D8O95759 1140 aa24.68■■□□□ 1.54
CCS-207ENST00000531990 USP14P54578 494 aa24.68■■□□□ 1.54
CCS-207ENST00000531990 HAND2P61296 217 aa24.68■■□□□ 1.54
CCS-207ENST00000531990 ICA1Q05084 483 aa24.68■■□□□ 1.54
CCS-207ENST00000531990 SH3D19Q5HYK7 790 aa24.68■■□□□ 1.54
CCS-207ENST00000531990 CFHR5Q9BXR6 569 aa24.68■■□□□ 1.54
CCS-207ENST00000531990 KANSL2Q9H9L4 492 aa24.68■■□□□ 1.54
CCS-207ENST00000531990 ARHGEF10LQ9HCE6 1279 aa24.68■■□□□ 1.54
CCS-207ENST00000531990 PCNTO95613 3336 aa24.68■■□□□ 1.54
CCS-207ENST00000531990 PDHXO00330 501 aa24.67■■□□□ 1.54
CCS-207ENST00000531990 TSPY3P0CV98 308 aa24.67■■□□□ 1.54
CCS-207ENST00000531990 TSPY8P0CW00 308 aa24.67■■□□□ 1.54
CCS-207ENST00000531990 LBX1P52954 281 aa24.67■■□□□ 1.54
CCS-207ENST00000531990 MOGSQ13724 837 aa24.67■■□□□ 1.54
CCS-207ENST00000531990 IMMTQ16891 758 aaKnown RBP24.67■■□□□ 1.54
CCS-207ENST00000531990 USP17L2Q6R6M4 530 aa24.67■■□□□ 1.54
CCS-207ENST00000531990 ESYT1Q9BSJ8 1104 aa24.67■■□□□ 1.54
CCS-207ENST00000531990 RNF41Q9H4P4 317 aaPredicted RBP24.67■■□□□ 1.54
CCS-207ENST00000531990 SH2D4AQ9H788 454 aa24.67■■□□□ 1.54
CCS-207ENST00000531990 ZFYVE28Q9HCC9 887 aa24.67■■□□□ 1.54
CCS-207ENST00000531990 TOMM22Q9NS69 142 aa24.67■■□□□ 1.54
CCS-207ENST00000531990 PABPC4Q13310 644 aaKnown RBP eCLIP24.66■■□□□ 1.54
CCS-207ENST00000531990 GPAT2Q6NUI2 795 aa24.66■■□□□ 1.54
CCS-207ENST00000531990 KIAA1683Q9H0B3 1180 aa24.66■■□□□ 1.54
CCS-207ENST00000531990 AGTPBP1Q9UPW5 1226 aa24.66■■□□□ 1.54
CCS-207ENST00000531990 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.66■■□□□ 1.54
CCS-207ENST00000531990 GREB1LQ9C091 1923 aaPredicted RBP24.65■■□□□ 1.54
CCS-207ENST00000531990 PCP11498 1178 aaKnown RBP24.65■■□□□ 1.54
CCS-207ENST00000531990 ATP2B2Q01814 1243 aa24.65■■□□□ 1.54
CCS-207ENST00000531990 CRHR2Q13324 411 aa24.65■■□□□ 1.54
CCS-207ENST00000531990 MFSD6Q6ZSS7 791 aa24.65■■□□□ 1.54
CCS-207ENST00000531990 ACER1Q8TDN7 264 aa24.65■■□□□ 1.54
CCS-207ENST00000531990 SLC45A1Q9Y2W3 748 aa24.65■■□□□ 1.54
CCS-207ENST00000531990 U3KPZ7 1027 aaPredicted RBP24.65■■□□□ 1.54
CCS-207ENST00000531990 TSPY2A6NKD2 308 aa24.64■■□□□ 1.54
CCS-207ENST00000531990 ORC4O43929 436 aa24.64■■□□□ 1.54
CCS-207ENST00000531990 RANBP6O60518 1105 aaKnown RBP24.64■■□□□ 1.54
CCS-207ENST00000531990 TFAP4Q01664 338 aa24.64■■□□□ 1.54
CCS-207ENST00000531990 ZYXQ15942 572 aaKnown RBP24.64■■□□□ 1.54
CCS-207ENST00000531990 RRP12Q5JTH9 1297 aaKnown RBP24.64■■□□□ 1.54
CCS-207ENST00000531990 AKNAD1Q5T1N1 836 aa24.64■■□□□ 1.54
CCS-207ENST00000531990 PARK7Q99497 189 aaKnown RBP24.64■■□□□ 1.54
CCS-207ENST00000531990 FGRP09769 529 aa24.63■■□□□ 1.53
CCS-207ENST00000531990 PTH1RQ03431 593 aa24.63■■□□□ 1.53
CCS-207ENST00000531990 CLEC10AQ8IUN9 316 aa24.63■■□□□ 1.53
CCS-207ENST00000531990 NEDD1Q8NHV4 660 aa24.63■■□□□ 1.53
CCS-207ENST00000531990 PNMA3Q9UL41 463 aa24.63■■□□□ 1.53
CCS-207ENST00000531990 EEF2P13639 858 aaKnown RBP24.62■■□□□ 1.53
CCS-207ENST00000531990 DGKZQ13574 1117 aa24.62■■□□□ 1.53
CCS-207ENST00000531990 NOM1Q5C9Z4 860 aaKnown RBP24.62■■□□□ 1.53
CCS-207ENST00000531990 FAM47AQ5JRC9 791 aa24.62■■□□□ 1.53
CCS-207ENST00000531990 PPP4R3BQ5MIZ7 849 aa24.62■■□□□ 1.53
CCS-207ENST00000531990 TREML2Q5T2D2 321 aa24.62■■□□□ 1.53
CCS-207ENST00000531990 IFFO2Q5TF58 517 aa24.62■■□□□ 1.53
CCS-207ENST00000531990 STAG1Q8WVM7 1258 aa24.62■■□□□ 1.53
CCS-207ENST00000531990 C12orf42Q96LP6 360 aa24.62■■□□□ 1.53
CCS-207ENST00000531990 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.62■■□□□ 1.53
CCS-207ENST00000531990 INCENPQ9NQS7 918 aa24.62■■□□□ 1.53
CCS-207ENST00000531990 PRDM10Q9NQV6 1147 aa24.62■■□□□ 1.53
CCS-207ENST00000531990 EMILIN3Q9NT22 766 aa24.62■■□□□ 1.53
CCS-207ENST00000531990 PLIN4Q96Q06 1357 aa24.62■■□□□ 1.53
CCS-207ENST00000531990 GPR25O00155 361 aa24.61■■□□□ 1.53
CCS-207ENST00000531990 OSBPP22059 807 aa24.61■■□□□ 1.53
CCS-207ENST00000531990 TBC1D10CQ8IV04 446 aa24.61■■□□□ 1.53
CCS-207ENST00000531990 ANO2Q9NQ90 1003 aa24.61■■□□□ 1.53
CCS-207ENST00000531990 NYAP2Q9P242 653 aa24.61■■□□□ 1.53
CCS-207ENST00000531990 TMX2Q9Y320 296 aa24.61■■□□□ 1.53
CCS-207ENST00000531990 A0A1W2PRG0 241 aa24.6■■□□□ 1.53
CCS-207ENST00000531990 NT5C2P49902 561 aa24.6■■□□□ 1.53
CCS-207ENST00000531990 SMCR8Q8TEV9 937 aaPredicted RBP24.6■■□□□ 1.53
CCS-207ENST00000531990 MAP4K1Q92918 833 aa24.6■■□□□ 1.53
CCS-207ENST00000531990 NBPF3Q9H094 633 aa24.6■■□□□ 1.53
CCS-207ENST00000531990 R3HDMLQ9H3Y0 253 aa24.6■■□□□ 1.53
CCS-207ENST00000531990 MYH4Q9Y623 1939 aa24.6■■□□□ 1.53
CCS-207ENST00000531990 IGKV6D-41A0A0C4DH26 115 aa24.59■■□□□ 1.53
CCS-207ENST00000531990 TLR2O60603 784 aa24.59■■□□□ 1.53
CCS-207ENST00000531990 IRX3P78415 501 aaPredicted RBP24.59■■□□□ 1.53
CCS-207ENST00000531990 SIAH1Q8IUQ4 282 aa24.59■■□□□ 1.53
CCS-207ENST00000531990 LPAR1Q92633 364 aa24.59■■□□□ 1.53
CCS-207ENST00000531990 ESR2Q92731 530 aa24.59■■□□□ 1.53
CCS-207ENST00000531990 CEP95Q96GE4 821 aa24.59■■□□□ 1.53
CCS-207ENST00000531990 GOPCQ9HD26 462 aa24.59■■□□□ 1.53
CCS-207ENST00000531990 MTMR4Q9NYA4 1195 aa24.59■■□□□ 1.53
CCS-207ENST00000531990 TACC3Q9Y6A5 838 aa24.59■■□□□ 1.53
CCS-207ENST00000531990 CASP8AP2Q9UKL3 1982 aa24.59■■□□□ 1.53
CCS-207ENST00000531990 FKTNO75072 461 aa24.58■■□□□ 1.53
CCS-207ENST00000531990 TTLL1O95922 423 aa24.58■■□□□ 1.53
CCS-207ENST00000531990 CYP2C8P10632 490 aa24.58■■□□□ 1.53
CCS-207ENST00000531990 HOXA7P31268 230 aaPredicted RBP24.58■■□□□ 1.53
CCS-207ENST00000531990 LSG1Q9H089 658 aaKnown RBP24.58■■□□□ 1.53
CCS-207ENST00000531990 VCPKMTQ9H867 229 aa24.58■■□□□ 1.53
CCS-207ENST00000531990 CNNM2Q9H8M5 875 aa24.58■■□□□ 1.53
CCS-207ENST00000531990 RBM8AQ9Y5S9 174 aaKnown RBP24.58■■□□□ 1.53
CCS-207ENST00000531990 VCAM1P19320 739 aa24.57■■□□□ 1.52
CCS-207ENST00000531990 ZNF296Q8WUU4 475 aaPredicted RBP24.57■■□□□ 1.52
CCS-207ENST00000531990 KRT23Q9C075 422 aa24.57■■□□□ 1.52
CCS-207ENST00000531990 ASCC2Q9H1I8 757 aaPredicted RBP24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms