RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 ADAM30Q9UKF2 790 aa4.36□□□□□ -1.71
CD44-234ENST00000531873 LEMD3Q9Y2U8 911 aa4.36□□□□□ -1.71
CD44-234ENST00000531873 CSADQ9Y600 493 aa4.36□□□□□ -1.71
CD44-234ENST00000531873 CHURC1-FNTBB4DL54 471 aa4.35□□□□□ -1.71
CD44-234ENST00000531873 MED26O95402 600 aa4.35□□□□□ -1.71
CD44-234ENST00000531873 PGRP06401 933 aa4.35□□□□□ -1.71
CD44-234ENST00000531873 CD68P34810 354 aaPredicted RBP4.35□□□□□ -1.71
CD44-234ENST00000531873 PDE4BQ07343 736 aa4.35□□□□□ -1.71
CD44-234ENST00000531873 TKFCQ3LXA3 575 aa4.35□□□□□ -1.71
CD44-234ENST00000531873 ARSHQ5FYA8 562 aa4.35□□□□□ -1.71
CD44-234ENST00000531873 ZBTB37Q5TC79 503 aa4.35□□□□□ -1.71
CD44-234ENST00000531873 INTS3Q68E01 1043 aaKnown RBP4.35□□□□□ -1.71
CD44-234ENST00000531873 UBE3DQ7Z6J8 389 aa4.35□□□□□ -1.71
CD44-234ENST00000531873 KIAA0907Q7Z7F0 614 aaPredicted RBP4.35□□□□□ -1.71
CD44-234ENST00000531873 ST13P5Q8NFI4 369 aaPredicted RBP4.35□□□□□ -1.71
CD44-234ENST00000531873 KRTAP4-11Q9BYQ6 195 aa4.35□□□□□ -1.71
CD44-234ENST00000531873 WNT10AQ9GZT5 417 aa4.35□□□□□ -1.71
CD44-234ENST00000531873 FBRSQ9HAH7 460 aa4.35□□□□□ -1.71
CD44-234ENST00000531873 TJP2Q9UDY2 1190 aa4.35□□□□□ -1.71
CD44-234ENST00000531873 PFDN2Q9UHV9 154 aa4.35□□□□□ -1.71
CD44-234ENST00000531873 ZMYM5Q9UJ78 669 aa4.35□□□□□ -1.71
CD44-234ENST00000531873 PPP1R9AQ9ULJ8 1098 aa4.35□□□□□ -1.71
CD44-234ENST00000531873 PCDHB10Q9UN67 800 aa4.35□□□□□ -1.71
CD44-234ENST00000531873 PTCH2Q9Y6C5 1203 aa4.35□□□□□ -1.71
CD44-234ENST00000531873 SYNGAP1Q96PV0 1343 aa4.35□□□□□ -1.71
CD44-234ENST00000531873 FAM86C2PA6NEL3 165 aa4.34□□□□□ -1.71
CD44-234ENST00000531873 DLL1O00548 723 aa4.34□□□□□ -1.71
CD44-234ENST00000531873 NEFMP07197 916 aa4.34□□□□□ -1.71
CD44-234ENST00000531873 CHMP4BP1P59074 171 aa4.34□□□□□ -1.71
CD44-234ENST00000531873 ID3Q02535 119 aa4.34□□□□□ -1.71
CD44-234ENST00000531873 MLECQ14165 292 aa4.34□□□□□ -1.71
CD44-234ENST00000531873 PTPROQ16827 1216 aa4.34□□□□□ -1.71
CD44-234ENST00000531873 VHLLQ6RSH7 139 aa4.34□□□□□ -1.71
CD44-234ENST00000531873 PPFIBP1Q86W92 1011 aa4.34□□□□□ -1.71
CD44-234ENST00000531873 SLFN12Q8IYM2 578 aa4.34□□□□□ -1.71
CD44-234ENST00000531873 THAP3Q8WTV1 239 aaPredicted RBP4.34□□□□□ -1.71
CD44-234ENST00000531873 APPBP2Q92624 585 aa4.34□□□□□ -1.71
CD44-234ENST00000531873 ZNF669Q96BR6 464 aaPredicted RBP4.34□□□□□ -1.71
CD44-234ENST00000531873 TMPRSS13Q9BYE2 586 aa4.34□□□□□ -1.71
CD44-234ENST00000531873 PHAXQ9H814 394 aaKnown RBP4.34□□□□□ -1.71
CD44-234ENST00000531873 CRIM1Q9NZV1 1036 aa4.34□□□□□ -1.71
CD44-234ENST00000531873 SLC12A7Q9Y666 1083 aa4.34□□□□□ -1.71
CD44-234ENST00000531873 KDM2BQ8NHM5 1336 aa4.34□□□□□ -1.71
CD44-234ENST00000531873 GSC2O15499 205 aa4.33□□□□□ -1.72
CD44-234ENST00000531873 ADCY3O60266 1144 aa4.33□□□□□ -1.72
CD44-234ENST00000531873 SUSD5O60279 629 aa4.33□□□□□ -1.72
CD44-234ENST00000531873 ETF1P62495 437 aaKnown RBP4.33□□□□□ -1.72
CD44-234ENST00000531873 HNRNPUQ00839 825 aaKnown RBP eCLIP4.33□□□□□ -1.72
CD44-234ENST00000531873 SSRP1Q08945 709 aaKnown RBP4.33□□□□□ -1.72
CD44-234ENST00000531873 NKG7Q16617 165 aa4.33□□□□□ -1.72
CD44-234ENST00000531873 SLC10A6Q3KNW5 377 aa4.33□□□□□ -1.72
CD44-234ENST00000531873 HP1BP3Q5SSJ5 553 aaPredicted RBP4.33□□□□□ -1.72
CD44-234ENST00000531873 HOMER1Q86YM7 354 aa4.33□□□□□ -1.72
CD44-234ENST00000531873 MCATQ8IVS2 390 aaKnown RBP4.33□□□□□ -1.72
CD44-234ENST00000531873 MRPL41Q8IXM3 137 aaKnown RBP4.33□□□□□ -1.72
CD44-234ENST00000531873 FAM13CQ8NE31 585 aa4.33□□□□□ -1.72
CD44-234ENST00000531873 TMEM87BQ96K49 555 aa4.33□□□□□ -1.72
CD44-234ENST00000531873 FANCD2OSQ96PS1 177 aa4.33□□□□□ -1.72
CD44-234ENST00000531873 DISC1Q9NRI5 854 aa4.33□□□□□ -1.72
CD44-234ENST00000531873 ZNF214Q9UL59 606 aaPredicted RBP4.33□□□□□ -1.72
CD44-234ENST00000531873 FANCGO15287 622 aa4.32□□□□□ -1.72
CD44-234ENST00000531873 ADAMTS4O75173 837 aa4.32□□□□□ -1.72
CD44-234ENST00000531873 UBOX5O94941 541 aa4.32□□□□□ -1.72
CD44-234ENST00000531873 SLFN14P0C7P3 912 aa4.32□□□□□ -1.72
CD44-234ENST00000531873 ADH5P11766 374 aa4.32□□□□□ -1.72
CD44-234ENST00000531873 RAG1P15918 1043 aa4.32□□□□□ -1.72
CD44-234ENST00000531873 SPINK2P20155 84 aa4.32□□□□□ -1.72
CD44-234ENST00000531873 SLBPQ14493 270 aaKnown RBP eCLIP4.32□□□□□ -1.72
CD44-234ENST00000531873 NCAPHQ15003 741 aa4.32□□□□□ -1.72
CD44-234ENST00000531873 DUOXA2Q1HG44 320 aa4.32□□□□□ -1.72
CD44-234ENST00000531873 AKAP4Q5JQC9 854 aa4.32□□□□□ -1.72
CD44-234ENST00000531873 EXOSC6Q5RKV6 272 aaKnown RBP4.32□□□□□ -1.72
CD44-234ENST00000531873 RNF187Q5TA31 235 aaPredicted RBP4.32□□□□□ -1.72
CD44-234ENST00000531873 KIAA1211LQ6NV74 962 aa4.32□□□□□ -1.72
CD44-234ENST00000531873 KIAA1211Q6ZU35 1233 aa4.32□□□□□ -1.72
CD44-234ENST00000531873 EEPD1Q7L9B9 569 aa4.32□□□□□ -1.72
CD44-234ENST00000531873 FILIP1Q7Z7B0 1213 aa4.32□□□□□ -1.72
CD44-234ENST00000531873 TMEM192Q8IY95 271 aa4.32□□□□□ -1.72
CD44-234ENST00000531873 TMEM130Q8N3G9 435 aa4.32□□□□□ -1.72
CD44-234ENST00000531873 RNF214Q8ND24 703 aa4.32□□□□□ -1.72
CD44-234ENST00000531873 FEZ1Q99689 392 aa4.32□□□□□ -1.72
CD44-234ENST00000531873 DPH2Q9BQC3 489 aaPredicted RBP4.32□□□□□ -1.72
CD44-234ENST00000531873 GSX1Q9H4S2 264 aaPredicted RBP4.32□□□□□ -1.72
CD44-234ENST00000531873 IFT57Q9NWB7 429 aa4.32□□□□□ -1.72
CD44-234ENST00000531873 MEGF11A6BM72 1044 aa4.31□□□□□ -1.72
CD44-234ENST00000531873 RGS13O14921 159 aa4.31□□□□□ -1.72
CD44-234ENST00000531873 CLSTN1O94985 981 aa4.31□□□□□ -1.72
CD44-234ENST00000531873 TIAF1O95411 115 aa4.31□□□□□ -1.72
CD44-234ENST00000531873 FAM153BP0C7A2 387 aa4.31□□□□□ -1.72
CD44-234ENST00000531873 CCNFP41002 786 aa4.31□□□□□ -1.72
CD44-234ENST00000531873 TTLL4Q14679 1199 aa4.31□□□□□ -1.72
CD44-234ENST00000531873 INTS5Q6P9B9 1019 aaKnown RBP4.31□□□□□ -1.72
CD44-234ENST00000531873 Q6ZS46 218 aa4.31□□□□□ -1.72
CD44-234ENST00000531873 C16orf86Q6ZW13 317 aa4.31□□□□□ -1.72
CD44-234ENST00000531873 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.31□□□□□ -1.72
CD44-234ENST00000531873 HID1Q8IV36 788 aa4.31□□□□□ -1.72
CD44-234ENST00000531873 SLC6A18Q96N87 628 aa4.31□□□□□ -1.72
CD44-234ENST00000531873 RUSC1Q9BVN2 902 aa4.31□□□□□ -1.72
CD44-234ENST00000531873 BRINP2Q9C0B6 783 aa4.31□□□□□ -1.72
CD44-234ENST00000531873 SUGCTQ9HAC7 445 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms