RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 RASIP1Q5U651 963 aa5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 KIAA1211LQ6NV74 962 aa5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 CNNM4Q6P4Q7 775 aa5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 KSR2Q6VAB6 950 aa5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 NLRC3Q7RTR2 1065 aa5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 CCDC155Q8N6L0 562 aa5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 ASAP3Q8TDY4 903 aa5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 HOOK2Q96ED9 719 aa5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 MTMR8Q96EF0 704 aa5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 CLUHP3Q96NS8 147 aa5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 HHIPQ96QV1 700 aa5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 AARSD1Q9BTE6 412 aaKnown RBP5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 CNNM2Q9H8M5 875 aa5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 TCF7L1Q9HCS4 588 aa5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 CHST12Q9NRB3 414 aa5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 STRN4Q9NRL3 753 aa5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 ZNF180Q9UJW8 692 aa5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 ZNF214Q9UL59 606 aaPredicted RBP5.53□□□□□ -1.52
AC055878.1-201ENST00000531858 LTBP3Q9NS15 1303 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 CDC14CA4D256 554 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 METTL12A8MUP2 240 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 F2P00734 622 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 F11P03951 625 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 PROCP04070 461 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 ASLP04424 464 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 IFIT2P09913 472 aaKnown RBP5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 COL6A1P12109 1028 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 L1CAMP32004 1257 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 FLT3P36888 993 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 HTR3AP46098 478 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 PDE4BQ07343 736 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 PCDH1Q08174 1060 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 AP3B2Q13367 1082 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 PICALMQ13492 652 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 STAT4Q14765 748 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 TMEM201Q5SNT2 666 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 COL13A1Q5TAT6 717 aaPredicted RBP5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 FOXB2Q5VYV0 432 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 SLC4A10Q6U841 1118 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 SV2AQ7L0J3 742 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 KRTAP1-3Q8IUG1 177 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 RNF217Q8TC41 542 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 LEO1Q8WVC0 666 aaPredicted RBP5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 ATG4CQ96DT6 458 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 DHRS1Q96LJ7 313 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 TTC1Q99614 292 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 RTFDC1Q9BY42 306 aaPredicted RBP5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 CBX8Q9HC52 389 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 ARHGEF4Q9NR80 690 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 ZFATQ9P243 1243 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 ZNF69Q9UC07 566 aa5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 APOBEC2Q9Y235 224 aaKnown RBP5.52□□□□□ -1.53
AC055878.1-201ENST00000531858 A0A1W2PQU0 124 aa5.51□□□□□ -1.53
AC055878.1-201ENST00000531858 ANO9A1A5B4 782 aa5.51□□□□□ -1.53
AC055878.1-201ENST00000531858 ANKRD34BA5PLL1 514 aa5.51□□□□□ -1.53
AC055878.1-201ENST00000531858 B4E1Z4 1266 aa5.51□□□□□ -1.53
AC055878.1-201ENST00000531858 K7ESF4 209 aa5.51□□□□□ -1.53
AC055878.1-201ENST00000531858 GFRA2O00451 464 aa5.51□□□□□ -1.53
AC055878.1-201ENST00000531858 FBXO21O94952 628 aa5.51□□□□□ -1.53
AC055878.1-201ENST00000531858 ADAMTS2O95450 1211 aa5.51□□□□□ -1.53
AC055878.1-201ENST00000531858 MAN1A1P33908 653 aa5.51□□□□□ -1.53
AC055878.1-201ENST00000531858 GPLD1P80108 840 aa5.51□□□□□ -1.53
AC055878.1-201ENST00000531858 STRN3Q13033 797 aa5.51□□□□□ -1.53
AC055878.1-201ENST00000531858 NEUROD1Q13562 356 aa5.51□□□□□ -1.53
AC055878.1-201ENST00000531858 GRAMD1BQ3KR37 738 aa5.51□□□□□ -1.53
AC055878.1-201ENST00000531858 FAM209AQ5JX71 171 aa5.51□□□□□ -1.53
AC055878.1-201ENST00000531858 ACBD5Q5T8D3 534 aaPredicted RBP5.51□□□□□ -1.53
AC055878.1-201ENST00000531858 SYDE2Q5VT97 1194 aa5.51□□□□□ -1.53
AC055878.1-201ENST00000531858 DHX32Q7L7V1 743 aaKnown RBP5.51□□□□□ -1.53
AC055878.1-201ENST00000531858 KRT25Q7Z3Z0 450 aa5.51□□□□□ -1.53
AC055878.1-201ENST00000531858 PODNQ7Z5L7 613 aa5.51□□□□□ -1.53
AC055878.1-201ENST00000531858 STRA8Q7Z7C7 330 aa5.51□□□□□ -1.53
AC055878.1-201ENST00000531858 STK11IPQ8N1F8 1099 aa5.51□□□□□ -1.53
AC055878.1-201ENST00000531858 VWA5B2Q8N398 1253 aa5.51□□□□□ -1.53
AC055878.1-201ENST00000531858 KLHL6Q8WZ60 621 aa5.51□□□□□ -1.53
AC055878.1-201ENST00000531858 ANTXR1Q9H6X2 564 aa5.51□□□□□ -1.53
AC055878.1-201ENST00000531858 IFT22Q9H7X7 185 aa5.51□□□□□ -1.53
AC055878.1-201ENST00000531858 PNMA8BQ9ULN7 279 aaPredicted RBP5.51□□□□□ -1.53
AC055878.1-201ENST00000531858 DYRK1BQ9Y463 629 aa5.51□□□□□ -1.53
AC055878.1-201ENST00000531858 SLC22A31A6NKX4 558 aa5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 GRIN3BO60391 1043 aa5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 SMNDC1O75940 238 aaKnown RBP eCLIP5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 NBPF7P0C2Y1 421 aaPredicted RBP5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 ACRP10323 421 aa5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 ACPPP15309 386 aa5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 ZSCAN20P17040 1043 aaPredicted RBP5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 NFKB1P19838 968 aa5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 SDSP20132 328 aa5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 ITGA6P23229 1130 aa5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 CTSOP43234 321 aaPredicted RBP5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 GABREP78334 506 aa5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 MAPRE1Q15691 268 aaKnown RBP5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 GNPTABQ3T906 1256 aa5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 MINDY4Q4G0A6 757 aa5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 INO80DQ53TQ3 878 aaPredicted RBP5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 OVOS1Q6IE37 1185 aa5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 LYPD4Q6UWN0 246 aa5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 PRICKLE2Q7Z3G6 844 aa5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 KIF18BQ86Y91 864 aa5.5□□□□□ -1.53
AC055878.1-201ENST00000531858 AMOTL1Q8IY63 956 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms