RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-220ENST00000531733 PDE3AQ14432 1141 aa25.6■■□□□ 1.69
FDFT1-220ENST00000531733 RAB3GAP1Q15042 981 aa25.6■■□□□ 1.69
FDFT1-220ENST00000531733 LHX8Q68G74 356 aa25.6■■□□□ 1.69
FDFT1-220ENST00000531733 AACSQ86V21 672 aa25.6■■□□□ 1.69
FDFT1-220ENST00000531733 FEZ1Q99689 392 aa25.6■■□□□ 1.69
FDFT1-220ENST00000531733 RIOK1Q9BRS2 568 aaKnown RBP25.6■■□□□ 1.69
FDFT1-220ENST00000531733 EHD4Q9H223 541 aa25.6■■□□□ 1.69
FDFT1-220ENST00000531733 GUCY1A2P33402 732 aa25.59■■□□□ 1.69
FDFT1-220ENST00000531733 FLRT1Q9NZU1 646 aa25.59■■□□□ 1.69
FDFT1-220ENST00000531733 USP17L15C9J2P7 530 aa25.58■■□□□ 1.69
FDFT1-220ENST00000531733 USP17L13C9JLJ4 530 aa25.58■■□□□ 1.69
FDFT1-220ENST00000531733 USP17L11C9JVI0 530 aa25.58■■□□□ 1.69
FDFT1-220ENST00000531733 USP17L18D6R9N7 530 aa25.58■■□□□ 1.69
FDFT1-220ENST00000531733 USP17L22D6RA61 530 aa25.58■■□□□ 1.69
FDFT1-220ENST00000531733 USP17L17D6RBQ6 530 aa25.58■■□□□ 1.69
FDFT1-220ENST00000531733 USP17L19D6RCP7 530 aa25.58■■□□□ 1.69
FDFT1-220ENST00000531733 USP17L20D6RJB6 530 aa25.58■■□□□ 1.69
FDFT1-220ENST00000531733 RGS2P41220 211 aa25.58■■□□□ 1.69
FDFT1-220ENST00000531733 USP17L24Q0WX57 530 aa25.58■■□□□ 1.69
FDFT1-220ENST00000531733 CERKLQ49MI3 558 aaPredicted RBP25.58■■□□□ 1.69
FDFT1-220ENST00000531733 CATSPERGQ6ZRH7 1159 aa25.58■■□□□ 1.69
FDFT1-220ENST00000531733 PANK1Q8TE04 598 aa25.58■■□□□ 1.69
FDFT1-220ENST00000531733 GTF3C2Q8WUA4 911 aaPredicted RBP25.58■■□□□ 1.69
FDFT1-220ENST00000531733 APBA2Q99767 749 aa25.58■■□□□ 1.69
FDFT1-220ENST00000531733 IL1RAPL2Q9NP60 686 aa25.58■■□□□ 1.69
FDFT1-220ENST00000531733 COL6A1P12109 1028 aa25.57■■□□□ 1.68
FDFT1-220ENST00000531733 VCAM1P19320 739 aa25.57■■□□□ 1.68
FDFT1-220ENST00000531733 BMP8BP34820 402 aa25.57■■□□□ 1.68
FDFT1-220ENST00000531733 MAGEA10P43363 369 aaPredicted RBP25.57■■□□□ 1.68
FDFT1-220ENST00000531733 MAP3K12Q12852 859 aa25.57■■□□□ 1.68
FDFT1-220ENST00000531733 ABCB5Q2M3G0 1257 aa25.57■■□□□ 1.68
FDFT1-220ENST00000531733 CCAR1Q8IX12 1150 aaKnown RBP25.57■■□□□ 1.68
FDFT1-220ENST00000531733 BTBD7Q9P203 1132 aa25.57■■□□□ 1.68
FDFT1-220ENST00000531733 RABGAP1Q9Y3P9 1069 aa25.57■■□□□ 1.68
FDFT1-220ENST00000531733 NAV1Q8NEY1 1877 aa25.56■■□□□ 1.68
FDFT1-220ENST00000531733 MAP2K5Q13163 448 aa25.56■■□□□ 1.68
FDFT1-220ENST00000531733 TRMT44Q8IYL2 757 aaKnown RBP25.56■■□□□ 1.68
FDFT1-220ENST00000531733 KIAA1683Q9H0B3 1180 aa25.56■■□□□ 1.68
FDFT1-220ENST00000531733 FRMPD3Q5JV73 1810 aa25.56■■□□□ 1.68
FDFT1-220ENST00000531733 TTC6Q86TZ1 520 aa25.55■■□□□ 1.68
FDFT1-220ENST00000531733 GABPAQ06546 454 aa25.54■■□□□ 1.68
FDFT1-220ENST00000531733 SEPT2Q15019 361 aa25.54■■□□□ 1.68
FDFT1-220ENST00000531733 LRRC26Q2I0M4 334 aa25.54■■□□□ 1.68
FDFT1-220ENST00000531733 CERS3Q8IU89 383 aa25.54■■□□□ 1.68
FDFT1-220ENST00000531733 MAGEB6P1A0A0J9YX57 407 aa25.53■■□□□ 1.68
FDFT1-220ENST00000531733 A0A1W2PRG0 241 aa25.53■■□□□ 1.68
FDFT1-220ENST00000531733 SPDYE16A6NNV3 312 aaPredicted RBP25.53■■□□□ 1.68
FDFT1-220ENST00000531733 PDE6AP16499 860 aa25.53■■□□□ 1.68
FDFT1-220ENST00000531733 USP14P54578 494 aa25.53■■□□□ 1.68
FDFT1-220ENST00000531733 WDR78Q5VTH9 848 aa25.53■■□□□ 1.68
FDFT1-220ENST00000531733 RHPN1Q8TCX5 695 aa25.53■■□□□ 1.68
FDFT1-220ENST00000531733 EDC3Q96F86 508 aaKnown RBP25.53■■□□□ 1.68
FDFT1-220ENST00000531733 RPAP3Q9H6T3 665 aaPredicted RBP25.53■■□□□ 1.68
FDFT1-220ENST00000531733 CYP2D6P10635 497 aa25.52■■□□□ 1.68
FDFT1-220ENST00000531733 PTPREP23469 700 aa25.52■■□□□ 1.68
FDFT1-220ENST00000531733 ERC1Q8IUD2 1116 aa25.52■■□□□ 1.68
FDFT1-220ENST00000531733 NPLOC4Q8TAT6 608 aa25.52■■□□□ 1.68
FDFT1-220ENST00000531733 CWC22Q9HCG8 908 aaKnown RBP25.52■■□□□ 1.68
FDFT1-220ENST00000531733 A0A0C4DFX4 3053 aa25.51■■□□□ 1.67
FDFT1-220ENST00000531733 APBB1O00213 710 aa25.51■■□□□ 1.67
FDFT1-220ENST00000531733 POLR3DP05423 398 aaPredicted RBP25.51■■□□□ 1.67
FDFT1-220ENST00000531733 SLFNL1Q499Z3 407 aa25.51■■□□□ 1.67
FDFT1-220ENST00000531733 KIAA1755Q5JYT7 1200 aa25.51■■□□□ 1.67
FDFT1-220ENST00000531733 SLC9C2Q5TAH2 1124 aa25.51■■□□□ 1.67
FDFT1-220ENST00000531733 LBX2Q6XYB7 198 aa25.51■■□□□ 1.67
FDFT1-220ENST00000531733 MIER1Q8N108 512 aa25.51■■□□□ 1.67
FDFT1-220ENST00000531733 SDR42E1Q8WUS8 393 aa25.51■■□□□ 1.67
FDFT1-220ENST00000531733 CABP5Q9NP86 173 aa25.51■■□□□ 1.67
FDFT1-220ENST00000531733 LAMA2P24043 3122 aaKnown RBP25.5■■□□□ 1.67
FDFT1-220ENST00000531733 TCRBV5S4A2TA0A5A2 114 aa25.5■■□□□ 1.67
FDFT1-220ENST00000531733 SLC15A5A6NIM6 579 aa25.5■■□□□ 1.67
FDFT1-220ENST00000531733 CCNA1P78396 465 aa25.5■■□□□ 1.67
FDFT1-220ENST00000531733 GRB14Q14449 540 aa25.5■■□□□ 1.67
FDFT1-220ENST00000531733 Q7L0L9 218 aa25.5■■□□□ 1.67
FDFT1-220ENST00000531733 LCORLQ8N3X6 602 aa25.5■■□□□ 1.67
FDFT1-220ENST00000531733 SLC44A5Q8NCS7 719 aa25.5■■□□□ 1.67
FDFT1-220ENST00000531733 ZNF532Q9HCE3 1301 aa25.5■■□□□ 1.67
FDFT1-220ENST00000531733 RLFQ13129 1914 aa25.49■■□□□ 1.67
FDFT1-220ENST00000531733 SMIM22K7EJ46 135 aa25.49■■□□□ 1.67
FDFT1-220ENST00000531733 TRPV1Q8NER1 839 aa25.49■■□□□ 1.67
FDFT1-220ENST00000531733 MCM9Q9NXL9 1143 aa25.49■■□□□ 1.67
FDFT1-220ENST00000531733 GOLIM4O00461 696 aa25.48■■□□□ 1.67
FDFT1-220ENST00000531733 IGHA2P01877 340 aa25.48■■□□□ 1.67
FDFT1-220ENST00000531733 CYP2C19P33261 490 aa25.48■■□□□ 1.67
FDFT1-220ENST00000531733 TMED8Q6PL24 325 aaPredicted RBP25.48■■□□□ 1.67
FDFT1-220ENST00000531733 CLEC10AQ8IUN9 316 aa25.48■■□□□ 1.67
FDFT1-220ENST00000531733 SIRT2Q8IXJ6 389 aa25.48■■□□□ 1.67
FDFT1-220ENST00000531733 TDHQ8IZJ6 230 aa25.48■■□□□ 1.67
FDFT1-220ENST00000531733 DNAJC2Q99543 621 aaKnown RBP25.48■■□□□ 1.67
FDFT1-220ENST00000531733 BCL11AQ9H165 835 aa25.48■■□□□ 1.67
FDFT1-220ENST00000531733 DCP1AQ9NPI6 582 aaPredicted RBP25.48■■□□□ 1.67
FDFT1-220ENST00000531733 MPHOSPH10O00566 681 aaKnown RBP25.47■■□□□ 1.67
FDFT1-220ENST00000531733 GLRX3O76003 335 aaKnown RBP25.47■■□□□ 1.67
FDFT1-220ENST00000531733 HOXC6P09630 235 aa25.47■■□□□ 1.67
FDFT1-220ENST00000531733 TTF1Q15361 905 aaPredicted RBP25.47■■□□□ 1.67
FDFT1-220ENST00000531733 MFSD14CQ5VZR4 134 aa25.47■■□□□ 1.67
FDFT1-220ENST00000531733 DYNLL2Q96FJ2 89 aa25.47■■□□□ 1.67
FDFT1-220ENST00000531733 CRNKL1Q9BZJ0 848 aaKnown RBP25.47■■□□□ 1.67
FDFT1-220ENST00000531733 UBE2OQ9C0C9 1292 aaKnown RBP25.47■■□□□ 1.67
FDFT1-220ENST00000531733 PRKAB2O43741 272 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 271.5 ms