RNA–Protein interactions for RNA: ENST00000531607.5

CHEK1-212, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 462 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-212ENST00000531607 MAP2K5Q13163 448 aa12.95□□□□□ -0.34
CHEK1-212ENST00000531607 ZYXQ15942 572 aaKnown RBP12.95□□□□□ -0.34
CHEK1-212ENST00000531607 Q3C1V9 767 aa12.95□□□□□ -0.34
CHEK1-212ENST00000531607 TTC39AQ5SRH9 613 aa12.95□□□□□ -0.34
CHEK1-212ENST00000531607 USP17L2Q6R6M4 530 aa12.95□□□□□ -0.34
CHEK1-212ENST00000531607 ADGRA1Q86SQ6 560 aa12.95□□□□□ -0.34
CHEK1-212ENST00000531607 FAM161BQ96MY7 647 aa12.95□□□□□ -0.34
CHEK1-212ENST00000531607 COL25A1Q9BXS0 654 aaPredicted RBP12.95□□□□□ -0.34
CHEK1-212ENST00000531607 SNRKQ9NRH2 765 aa12.95□□□□□ -0.34
CHEK1-212ENST00000531607 GINM1Q9NU53 330 aa12.95□□□□□ -0.34
CHEK1-212ENST00000531607 ZNF316A6NFI3 1004 aaPredicted RBP12.94□□□□□ -0.34
CHEK1-212ENST00000531607 CNGA1P29973 690 aa12.94□□□□□ -0.34
CHEK1-212ENST00000531607 CCNA1P78396 465 aa12.94□□□□□ -0.34
CHEK1-212ENST00000531607 G3BP1Q13283 466 aaKnown RBP eCLIP12.94□□□□□ -0.34
CHEK1-212ENST00000531607 MFSD14CQ5VZR4 134 aa12.94□□□□□ -0.34
CHEK1-212ENST00000531607 ATF7IPQ6VMQ6 1270 aa12.94□□□□□ -0.34
CHEK1-212ENST00000531607 FOXP4Q8IVH2 680 aaPredicted RBP12.94□□□□□ -0.34
CHEK1-212ENST00000531607 GUCD1Q96NT3 240 aa12.94□□□□□ -0.34
CHEK1-212ENST00000531607 SENP6Q9GZR1 1112 aaPredicted RBP12.94□□□□□ -0.34
CHEK1-212ENST00000531607 EMILIN3Q9NT22 766 aa12.94□□□□□ -0.34
CHEK1-212ENST00000531607 NDUFB9Q9Y6M9 179 aa12.94□□□□□ -0.34
CHEK1-212ENST00000531607 GBF1Q92538 1859 aa12.93□□□□□ -0.34
CHEK1-212ENST00000531607 GH2P01242 217 aa12.93□□□□□ -0.34
CHEK1-212ENST00000531607 ATN1P54259 1190 aaPredicted RBP12.93□□□□□ -0.34
CHEK1-212ENST00000531607 ZNF697Q5TEC3 545 aa12.93□□□□□ -0.34
CHEK1-212ENST00000531607 METTL16Q86W50 562 aaKnown RBP12.93□□□□□ -0.34
CHEK1-212ENST00000531607 PRKAG2Q9UGJ0 569 aa12.93□□□□□ -0.34
CHEK1-212ENST00000531607 DDX20Q9UHI6 824 aaKnown RBP12.93□□□□□ -0.34
CHEK1-212ENST00000531607 RABGAP1Q9Y3P9 1069 aa12.93□□□□□ -0.34
CHEK1-212ENST00000531607 IVNS1ABPQ9Y6Y0 642 aa12.93□□□□□ -0.34
CHEK1-212ENST00000531607 PNMA6EA0A0J9YXQ4 647 aa12.92□□□□□ -0.34
CHEK1-212ENST00000531607 MSCO60682 206 aa12.92□□□□□ -0.34
CHEK1-212ENST00000531607 GNAI2P04899 355 aa12.92□□□□□ -0.34
CHEK1-212ENST00000531607 PPP4CP60510 307 aa12.92□□□□□ -0.34
CHEK1-212ENST00000531607 CCDC158Q5M9N0 1113 aa12.92□□□□□ -0.34
CHEK1-212ENST00000531607 FAM109BQ6ICB4 259 aaPredicted RBP12.92□□□□□ -0.34
CHEK1-212ENST00000531607 POTEEQ6S8J3 1075 aa12.92□□□□□ -0.34
CHEK1-212ENST00000531607 TRMT2AQ8IZ69 625 aaKnown RBP12.92□□□□□ -0.34
CHEK1-212ENST00000531607 EDC3Q96F86 508 aaKnown RBP12.92□□□□□ -0.34
CHEK1-212ENST00000531607 C12orf42Q96LP6 360 aa12.92□□□□□ -0.34
CHEK1-212ENST00000531607 FLRT1Q9NZU1 646 aa12.92□□□□□ -0.34
CHEK1-212ENST00000531607 MCM3APO60318 1980 aa12.91□□□□□ -0.34
CHEK1-212ENST00000531607 SLC15A5A6NIM6 579 aa12.91□□□□□ -0.34
CHEK1-212ENST00000531607 USP17L15C9J2P7 530 aa12.91□□□□□ -0.34
CHEK1-212ENST00000531607 USP17L13C9JLJ4 530 aa12.91□□□□□ -0.34
CHEK1-212ENST00000531607 USP17L11C9JVI0 530 aa12.91□□□□□ -0.34
CHEK1-212ENST00000531607 USP17L18D6R9N7 530 aa12.91□□□□□ -0.34
CHEK1-212ENST00000531607 USP17L22D6RA61 530 aa12.91□□□□□ -0.34
CHEK1-212ENST00000531607 USP17L17D6RBQ6 530 aa12.91□□□□□ -0.34
CHEK1-212ENST00000531607 USP17L19D6RCP7 530 aa12.91□□□□□ -0.34
CHEK1-212ENST00000531607 USP17L20D6RJB6 530 aa12.91□□□□□ -0.34
CHEK1-212ENST00000531607 POTEB2H3BUK9 544 aa12.91□□□□□ -0.34
CHEK1-212ENST00000531607 DNM1LO00429 736 aa12.91□□□□□ -0.34
CHEK1-212ENST00000531607 CNMDO75829 334 aa12.91□□□□□ -0.34
CHEK1-212ENST00000531607 CYP2E1P05181 493 aaPredicted RBP12.91□□□□□ -0.34
CHEK1-212ENST00000531607 VCAM1P19320 739 aa12.91□□□□□ -0.34
CHEK1-212ENST00000531607 RARSP54136 660 aaKnown RBP12.91□□□□□ -0.34
CHEK1-212ENST00000531607 ATP2B2Q01814 1243 aa12.91□□□□□ -0.34
CHEK1-212ENST00000531607 EVX2Q03828 476 aa12.91□□□□□ -0.34
CHEK1-212ENST00000531607 USP17L24Q0WX57 530 aa12.91□□□□□ -0.34
CHEK1-212ENST00000531607 OS9Q13438 667 aaPredicted RBP12.91□□□□□ -0.34
CHEK1-212ENST00000531607 RAB3GAP1Q15042 981 aa12.91□□□□□ -0.34
CHEK1-212ENST00000531607 TNNI3KQ59H18 835 aa12.91□□□□□ -0.34
CHEK1-212ENST00000531607 ARHGAP45Q92619 1136 aa12.91□□□□□ -0.34
CHEK1-212ENST00000531607 LPAR1Q92633 364 aa12.91□□□□□ -0.34
CHEK1-212ENST00000531607 DBNDD2Q9BQY9 259 aa12.91□□□□□ -0.34
CHEK1-212ENST00000531607 FPGT-TNNI3KV9GXZ4 949 aa12.91□□□□□ -0.34
CHEK1-212ENST00000531607 MYH4Q9Y623 1939 aa12.9□□□□□ -0.34
CHEK1-212ENST00000531607 PTPREP23469 700 aa12.9□□□□□ -0.34
CHEK1-212ENST00000531607 CYP2C19P33261 490 aa12.9□□□□□ -0.34
CHEK1-212ENST00000531607 USP5P45974 858 aa12.9□□□□□ -0.34
CHEK1-212ENST00000531607 USP14P54578 494 aa12.9□□□□□ -0.34
CHEK1-212ENST00000531607 RTP1P59025 263 aa12.9□□□□□ -0.34
CHEK1-212ENST00000531607 DYNLL1P63167 89 aaKnown RBP12.9□□□□□ -0.34
CHEK1-212ENST00000531607 GRB14Q14449 540 aa12.9□□□□□ -0.34
CHEK1-212ENST00000531607 PRDM5Q9NQX1 630 aaPredicted RBP12.9□□□□□ -0.34
CHEK1-212ENST00000531607 ATP11BQ9Y2G3 1177 aa12.9□□□□□ -0.34
CHEK1-212ENST00000531607 CYP7A1P22680 504 aa12.89□□□□□ -0.35
CHEK1-212ENST00000531607 ZAP70P43403 619 aa12.89□□□□□ -0.35
CHEK1-212ENST00000531607 CATSPERGQ6ZRH7 1159 aa12.89□□□□□ -0.35
CHEK1-212ENST00000531607 MIGA1Q8NAN2 632 aa12.89□□□□□ -0.35
CHEK1-212ENST00000531607 NPLOC4Q8TAT6 608 aa12.89□□□□□ -0.35
CHEK1-212ENST00000531607 KIAA1683Q9H0B3 1180 aa12.89□□□□□ -0.35
CHEK1-212ENST00000531607 GPR108Q9NPR9 543 aa12.89□□□□□ -0.35
CHEK1-212ENST00000531607 PIH1D3Q9NQM4 214 aaKnown RBP12.89□□□□□ -0.35
CHEK1-212ENST00000531607 BTBD7Q9P203 1132 aa12.89□□□□□ -0.35
CHEK1-212ENST00000531607 SERPINB13Q9UIV8 391 aa12.89□□□□□ -0.35
CHEK1-212ENST00000531607 REV3LO60673 3130 aa12.88□□□□□ -0.35
CHEK1-212ENST00000531607 SPDYE16A6NNV3 312 aaPredicted RBP12.88□□□□□ -0.35
CHEK1-212ENST00000531607 KBTBD13C9JR72 458 aa12.88□□□□□ -0.35
CHEK1-212ENST00000531607 IDH1O75874 414 aaKnown RBP12.88□□□□□ -0.35
CHEK1-212ENST00000531607 HOXC6P09630 235 aa12.88□□□□□ -0.35
CHEK1-212ENST00000531607 CYBAP13498 195 aa12.88□□□□□ -0.35
CHEK1-212ENST00000531607 TRIM27P14373 513 aa12.88□□□□□ -0.35
CHEK1-212ENST00000531607 ABCB5Q2M3G0 1257 aa12.88□□□□□ -0.35
CHEK1-212ENST00000531607 CERKLQ49MI3 558 aaPredicted RBP12.88□□□□□ -0.35
CHEK1-212ENST00000531607 GJC2Q5T442 439 aaPredicted RBP12.88□□□□□ -0.35
CHEK1-212ENST00000531607 TATDN1Q6P1N9 297 aa12.88□□□□□ -0.35
CHEK1-212ENST00000531607 TRPV1Q8NER1 839 aa12.88□□□□□ -0.35
CHEK1-212ENST00000531607 ACER1Q8TDN7 264 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms