RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 SAMD1Q6SPF0 538 aaPredicted RBP11.3□□□□□ -0.6
NEDD8-206ENST00000531430 ADGRA1Q86SQ6 560 aa11.3□□□□□ -0.6
NEDD8-206ENST00000531430 MIGA1Q8NAN2 632 aa11.3□□□□□ -0.6
NEDD8-206ENST00000531430 GUCD1Q96NT3 240 aa11.3□□□□□ -0.6
NEDD8-206ENST00000531430 DBNDD2Q9BQY9 259 aa11.3□□□□□ -0.6
NEDD8-206ENST00000531430 BCL11AQ9H165 835 aa11.3□□□□□ -0.6
NEDD8-206ENST00000531430 DNAJC18Q9H819 358 aa11.3□□□□□ -0.6
NEDD8-206ENST00000531430 CABP5Q9NP86 173 aa11.3□□□□□ -0.6
NEDD8-206ENST00000531430 GINM1Q9NU53 330 aa11.3□□□□□ -0.6
NEDD8-206ENST00000531430 DDX20Q9UHI6 824 aaKnown RBP11.3□□□□□ -0.6
NEDD8-206ENST00000531430 RABGAP1Q9Y3P9 1069 aa11.3□□□□□ -0.6
NEDD8-206ENST00000531430 SLC15A5A6NIM6 579 aa11.29□□□□□ -0.6
NEDD8-206ENST00000531430 MPHOSPH10O00566 681 aaKnown RBP11.29□□□□□ -0.6
NEDD8-206ENST00000531430 IPO8O15397 1037 aaKnown RBP11.29□□□□□ -0.6
NEDD8-206ENST00000531430 SURF6O75683 361 aaKnown RBP11.29□□□□□ -0.6
NEDD8-206ENST00000531430 IDH1O75874 414 aaKnown RBP11.29□□□□□ -0.6
NEDD8-206ENST00000531430 CYP2E1P05181 493 aaPredicted RBP11.29□□□□□ -0.6
NEDD8-206ENST00000531430 RARSP54136 660 aaKnown RBP11.29□□□□□ -0.6
NEDD8-206ENST00000531430 RTP1P59025 263 aa11.29□□□□□ -0.6
NEDD8-206ENST00000531430 SHHQ15465 462 aa11.29□□□□□ -0.6
NEDD8-206ENST00000531430 ABCB5Q2M3G0 1257 aa11.29□□□□□ -0.6
NEDD8-206ENST00000531430 CERKLQ49MI3 558 aaPredicted RBP11.29□□□□□ -0.6
NEDD8-206ENST00000531430 POTEEQ6S8J3 1075 aa11.29□□□□□ -0.6
NEDD8-206ENST00000531430 CATSPERGQ6ZRH7 1159 aa11.29□□□□□ -0.6
NEDD8-206ENST00000531430 NPLOC4Q8TAT6 608 aa11.29□□□□□ -0.6
NEDD8-206ENST00000531430 ACER1Q8TDN7 264 aa11.29□□□□□ -0.6
NEDD8-206ENST00000531430 LPAR1Q92633 364 aa11.29□□□□□ -0.6
NEDD8-206ENST00000531430 FERMT2Q96AC1 680 aa11.29□□□□□ -0.6
NEDD8-206ENST00000531430 CCDC8Q9H0W5 538 aaPredicted RBP11.29□□□□□ -0.6
NEDD8-206ENST00000531430 PIH1D3Q9NQM4 214 aaKnown RBP11.29□□□□□ -0.6
NEDD8-206ENST00000531430 TNNQ9UQP3 1299 aa11.29□□□□□ -0.6
NEDD8-206ENST00000531430 PLXNB2O15031 1838 aa11.29□□□□□ -0.6
NEDD8-206ENST00000531430 MSCO60682 206 aa11.28□□□□□ -0.6
NEDD8-206ENST00000531430 BCAR3O75815 825 aa11.28□□□□□ -0.6
NEDD8-206ENST00000531430 CNMDO75829 334 aa11.28□□□□□ -0.6
NEDD8-206ENST00000531430 POLR3DP05423 398 aaPredicted RBP11.28□□□□□ -0.6
NEDD8-206ENST00000531430 CT47B1P0C2W7 299 aaPredicted RBP11.28□□□□□ -0.6
NEDD8-206ENST00000531430 USP14P54578 494 aa11.28□□□□□ -0.6
NEDD8-206ENST00000531430 PLS1Q14651 629 aa11.28□□□□□ -0.6
NEDD8-206ENST00000531430 TNNI3KQ59H18 835 aa11.28□□□□□ -0.6
NEDD8-206ENST00000531430 PRAMEF19Q5SWL8 479 aa11.28□□□□□ -0.6
NEDD8-206ENST00000531430 ARRDC4Q8NCT1 418 aa11.28□□□□□ -0.6
NEDD8-206ENST00000531430 BADQ92934 168 aa11.28□□□□□ -0.6
NEDD8-206ENST00000531430 CDX2Q99626 313 aaPredicted RBP11.28□□□□□ -0.6
NEDD8-206ENST00000531430 BTBD7Q9P203 1132 aa11.28□□□□□ -0.6
NEDD8-206ENST00000531430 FPGT-TNNI3KV9GXZ4 949 aa11.28□□□□□ -0.6
NEDD8-206ENST00000531430 LOC285556D6RIA3 1793 aa11.28□□□□□ -0.6
NEDD8-206ENST00000531430 COL2A1P02458 1487 aaPredicted RBP11.27□□□□□ -0.6
NEDD8-206ENST00000531430 KBTBD13C9JR72 458 aa11.27□□□□□ -0.61
NEDD8-206ENST00000531430 DNM1LO00429 736 aa11.27□□□□□ -0.61
NEDD8-206ENST00000531430 MTX1Q13505 466 aa11.27□□□□□ -0.61
NEDD8-206ENST00000531430 FAM109BQ6ICB4 259 aaPredicted RBP11.27□□□□□ -0.61
NEDD8-206ENST00000531430 SLC39A5Q6ZMH5 540 aa11.27□□□□□ -0.61
NEDD8-206ENST00000531430 TTC6Q86TZ1 520 aa11.27□□□□□ -0.61
NEDD8-206ENST00000531430 TRMT2AQ8IZ69 625 aaKnown RBP11.27□□□□□ -0.61
NEDD8-206ENST00000531430 MAGEB6Q8N7X4 407 aa11.27□□□□□ -0.61
NEDD8-206ENST00000531430 ARHGAP45Q92619 1136 aa11.27□□□□□ -0.61
NEDD8-206ENST00000531430 SEMA6BQ9H3T3 888 aa11.27□□□□□ -0.61
NEDD8-206ENST00000531430 RPAP3Q9H6T3 665 aaPredicted RBP11.27□□□□□ -0.61
NEDD8-206ENST00000531430 VCAM1P19320 739 aa11.26□□□□□ -0.61
NEDD8-206ENST00000531430 ADCYAP1R1P41586 468 aa11.26□□□□□ -0.61
NEDD8-206ENST00000531430 C9orf50Q5SZB4 431 aa11.26□□□□□ -0.61
NEDD8-206ENST00000531430 METTL16Q86W50 562 aaKnown RBP11.26□□□□□ -0.61
NEDD8-206ENST00000531430 TRPV1Q8NER1 839 aa11.26□□□□□ -0.61
NEDD8-206ENST00000531430 MAFAQ8NHW3 353 aaPredicted RBP11.26□□□□□ -0.61
NEDD8-206ENST00000531430 MYLIPQ8WY64 445 aa11.26□□□□□ -0.61
NEDD8-206ENST00000531430 TANGO6Q9C0B7 1094 aa11.26□□□□□ -0.61
NEDD8-206ENST00000531430 C1orf115Q9H7X2 142 aa11.26□□□□□ -0.61
NEDD8-206ENST00000531430 HOXC10Q9NYD6 342 aa11.26□□□□□ -0.61
NEDD8-206ENST00000531430 SERPINB13Q9UIV8 391 aa11.26□□□□□ -0.61
NEDD8-206ENST00000531430 DNAH12Q6ZR08 3092 aa11.26□□□□□ -0.61
NEDD8-206ENST00000531430 ADORA2AP29274 412 aa11.25□□□□□ -0.61
NEDD8-206ENST00000531430 COG2Q14746 738 aa11.25□□□□□ -0.61
NEDD8-206ENST00000531430 SEPT2Q15019 361 aa11.25□□□□□ -0.61
NEDD8-206ENST00000531430 TRIM60Q495X7 471 aa11.25□□□□□ -0.61
NEDD8-206ENST00000531430 TATDN1Q6P1N9 297 aa11.25□□□□□ -0.61
NEDD8-206ENST00000531430 NCAPG2Q86XI2 1143 aa11.25□□□□□ -0.61
NEDD8-206ENST00000531430 MOV10L1Q9BXT6 1211 aaKnown RBP11.25□□□□□ -0.61
NEDD8-206ENST00000531430 KIAA1683Q9H0B3 1180 aa11.25□□□□□ -0.61
NEDD8-206ENST00000531430 UNC80Q8N2C7 3258 aa11.24□□□□□ -0.61
NEDD8-206ENST00000531430 PLCD1P51178 756 aa11.24□□□□□ -0.61
NEDD8-206ENST00000531430 ATP8B2P98198 1209 aa11.24□□□□□ -0.61
NEDD8-206ENST00000531430 MAP3K12Q12852 859 aa11.24□□□□□ -0.61
NEDD8-206ENST00000531430 GRB14Q14449 540 aa11.24□□□□□ -0.61
NEDD8-206ENST00000531430 SH3RF1Q7Z6J0 888 aa11.24□□□□□ -0.61
NEDD8-206ENST00000531430 C12orf42Q96LP6 360 aa11.24□□□□□ -0.61
NEDD8-206ENST00000531430 GPR108Q9NPR9 543 aa11.24□□□□□ -0.61
NEDD8-206ENST00000531430 SLC5A4Q9NY91 659 aa11.24□□□□□ -0.61
NEDD8-206ENST00000531430 SPDYE16A6NNV3 312 aaPredicted RBP11.23□□□□□ -0.61
NEDD8-206ENST00000531430 STRNO43815 780 aa11.23□□□□□ -0.61
NEDD8-206ENST00000531430 RAD21O60216 631 aa11.23□□□□□ -0.61
NEDD8-206ENST00000531430 HOXC6P09630 235 aa11.23□□□□□ -0.61
NEDD8-206ENST00000531430 TRIM27P14373 513 aa11.23□□□□□ -0.61
NEDD8-206ENST00000531430 FOSL2P15408 326 aa11.23□□□□□ -0.61
NEDD8-206ENST00000531430 ERCC3P19447 782 aa11.23□□□□□ -0.61
NEDD8-206ENST00000531430 TLE2Q04725 743 aa11.23□□□□□ -0.61
NEDD8-206ENST00000531430 TMEM57Q8N5G2 664 aa11.23□□□□□ -0.61
NEDD8-206ENST00000531430 PPM1EQ8WY54 764 aa11.23□□□□□ -0.61
NEDD8-206ENST00000531430 SPATC1LQ9H0A9 340 aa11.23□□□□□ -0.61
NEDD8-206ENST00000531430 ANTXR1Q9H6X2 564 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms