RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 ERC1Q8IUD2 1116 aa22.42■■□□□ 1.18
SSSCA1-206ENST00000531405 ACER1Q8TDN7 264 aa22.42■■□□□ 1.18
SSSCA1-206ENST00000531405 C11orf49Q9H6J7 331 aa22.42■■□□□ 1.18
SSSCA1-206ENST00000531405 OGDHLQ9ULD0 1010 aa22.42■■□□□ 1.18
SSSCA1-206ENST00000531405 RLFQ13129 1914 aa22.41■■□□□ 1.18
SSSCA1-206ENST00000531405 CNMDO75829 334 aa22.41■■□□□ 1.18
SSSCA1-206ENST00000531405 PLCD1P51178 756 aa22.41■■□□□ 1.18
SSSCA1-206ENST00000531405 ABCB5Q2M3G0 1257 aa22.41■■□□□ 1.18
SSSCA1-206ENST00000531405 MORN1Q5T089 497 aa22.41■■□□□ 1.18
SSSCA1-206ENST00000531405 PLEKHH3Q7Z736 793 aa22.41■■□□□ 1.18
SSSCA1-206ENST00000531405 MIER1Q8N108 512 aa22.41■■□□□ 1.18
SSSCA1-206ENST00000531405 GTF3C2Q8WUA4 911 aaPredicted RBP22.41■■□□□ 1.18
SSSCA1-206ENST00000531405 C12orf42Q96LP6 360 aa22.41■■□□□ 1.18
SSSCA1-206ENST00000531405 RIOK1Q9BRS2 568 aaKnown RBP22.41■■□□□ 1.18
SSSCA1-206ENST00000531405 LAMA2P24043 3122 aaKnown RBP22.41■■□□□ 1.18
SSSCA1-206ENST00000531405 A0A1W2PPC1 479 aa22.4■■□□□ 1.18
SSSCA1-206ENST00000531405 USP17L15C9J2P7 530 aa22.4■■□□□ 1.18
SSSCA1-206ENST00000531405 USP17L13C9JLJ4 530 aa22.4■■□□□ 1.18
SSSCA1-206ENST00000531405 USP17L11C9JVI0 530 aa22.4■■□□□ 1.18
SSSCA1-206ENST00000531405 USP17L18D6R9N7 530 aa22.4■■□□□ 1.18
SSSCA1-206ENST00000531405 USP17L22D6RA61 530 aa22.4■■□□□ 1.18
SSSCA1-206ENST00000531405 USP17L17D6RBQ6 530 aa22.4■■□□□ 1.18
SSSCA1-206ENST00000531405 USP17L19D6RCP7 530 aa22.4■■□□□ 1.18
SSSCA1-206ENST00000531405 USP17L20D6RJB6 530 aa22.4■■□□□ 1.18
SSSCA1-206ENST00000531405 CCND3P30281 292 aaPredicted RBP22.4■■□□□ 1.18
SSSCA1-206ENST00000531405 SHMT1P34896 483 aa22.4■■□□□ 1.18
SSSCA1-206ENST00000531405 RGS2P41220 211 aa22.4■■□□□ 1.18
SSSCA1-206ENST00000531405 EVX2Q03828 476 aa22.4■■□□□ 1.18
SSSCA1-206ENST00000531405 USP17L24Q0WX57 530 aa22.4■■□□□ 1.18
SSSCA1-206ENST00000531405 TTC6Q86TZ1 520 aa22.4■■□□□ 1.18
SSSCA1-206ENST00000531405 LRCH3Q96II8 777 aa22.4■■□□□ 1.18
SSSCA1-206ENST00000531405 CWC22Q9HCG8 908 aaKnown RBP22.4■■□□□ 1.18
SSSCA1-206ENST00000531405 PFASO15067 1338 aa22.39■■□□□ 1.18
SSSCA1-206ENST00000531405 PARP14Q460N5 1801 aa22.39■■□□□ 1.17
SSSCA1-206ENST00000531405 APBB1O00213 710 aa22.39■■□□□ 1.17
SSSCA1-206ENST00000531405 SYN1P17600 705 aa22.39■■□□□ 1.17
SSSCA1-206ENST00000531405 VCAM1P19320 739 aa22.39■■□□□ 1.17
SSSCA1-206ENST00000531405 APBA2Q99767 749 aa22.39■■□□□ 1.17
SSSCA1-206ENST00000531405 KIAA1683Q9H0B3 1180 aa22.39■■□□□ 1.17
SSSCA1-206ENST00000531405 RABGAP1Q9Y3P9 1069 aa22.39■■□□□ 1.17
SSSCA1-206ENST00000531405 ZNFX1Q9P2E3 1918 aaKnown RBP22.38■■□□□ 1.17
SSSCA1-206ENST00000531405 MAGEB6P1A0A0J9YX57 407 aa22.38■■□□□ 1.17
SSSCA1-206ENST00000531405 GUCY1A2P33402 732 aa22.38■■□□□ 1.17
SSSCA1-206ENST00000531405 WDR78Q5VTH9 848 aa22.38■■□□□ 1.17
SSSCA1-206ENST00000531405 CATSPERGQ6ZRH7 1159 aa22.38■■□□□ 1.17
SSSCA1-206ENST00000531405 TRMT44Q8IYL2 757 aaKnown RBP22.38■■□□□ 1.17
SSSCA1-206ENST00000531405 RHPN1Q8TCX5 695 aa22.38■■□□□ 1.17
SSSCA1-206ENST00000531405 GDF15Q99988 308 aa22.38■■□□□ 1.17
SSSCA1-206ENST00000531405 BCL11AQ9H165 835 aa22.38■■□□□ 1.17
SSSCA1-206ENST00000531405 A0A0G2JMZ2 1700 aa22.37■■□□□ 1.17
SSSCA1-206ENST00000531405 COL11A1P12107 1806 aaPredicted RBP22.37■■□□□ 1.17
SSSCA1-206ENST00000531405 POLR3DP05423 398 aaPredicted RBP22.37■■□□□ 1.17
SSSCA1-206ENST00000531405 PDE6AP16499 860 aa22.37■■□□□ 1.17
SSSCA1-206ENST00000531405 USP14P54578 494 aa22.37■■□□□ 1.17
SSSCA1-206ENST00000531405 MAP2K5Q13163 448 aa22.37■■□□□ 1.17
SSSCA1-206ENST00000531405 SLC9C2Q5TAH2 1124 aa22.37■■□□□ 1.17
SSSCA1-206ENST00000531405 CABP5Q9NP86 173 aa22.37■■□□□ 1.17
SSSCA1-206ENST00000531405 BTBD7Q9P203 1132 aa22.37■■□□□ 1.17
SSSCA1-206ENST00000531405 SEPT2Q15019 361 aa22.36■■□□□ 1.17
SSSCA1-206ENST00000531405 LHX8Q68G74 356 aa22.36■■□□□ 1.17
SSSCA1-206ENST00000531405 TMED8Q6PL24 325 aaPredicted RBP22.36■■□□□ 1.17
SSSCA1-206ENST00000531405 DNAJC2Q99543 621 aaKnown RBP22.36■■□□□ 1.17
SSSCA1-206ENST00000531405 RPAP3Q9H6T3 665 aaPredicted RBP22.36■■□□□ 1.17
SSSCA1-206ENST00000531405 FLRT1Q9NZU1 646 aa22.36■■□□□ 1.17
SSSCA1-206ENST00000531405 GOLIM4O00461 696 aa22.35■■□□□ 1.17
SSSCA1-206ENST00000531405 CCNA1P78396 465 aa22.35■■□□□ 1.17
SSSCA1-206ENST00000531405 GABPAQ06546 454 aa22.35■■□□□ 1.17
SSSCA1-206ENST00000531405 TTF1Q15361 905 aaPredicted RBP22.35■■□□□ 1.17
SSSCA1-206ENST00000531405 SDR42E1Q8WUS8 393 aa22.35■■□□□ 1.17
SSSCA1-206ENST00000531405 EDC3Q96F86 508 aaKnown RBP22.35■■□□□ 1.17
SSSCA1-206ENST00000531405 CRNKL1Q9BZJ0 848 aaKnown RBP22.35■■□□□ 1.17
SSSCA1-206ENST00000531405 MCM9Q9NXL9 1143 aa22.35■■□□□ 1.17
SSSCA1-206ENST00000531405 A0A0C4DFX4 3053 aa22.34■■□□□ 1.17
SSSCA1-206ENST00000531405 ZNF532Q9HCE3 1301 aa22.34■■□□□ 1.17
SSSCA1-206ENST00000531405 ZNF236Q9UL36 1845 aa22.34■■□□□ 1.17
SSSCA1-206ENST00000531405 SPDYE16A6NNV3 312 aaPredicted RBP22.34■■□□□ 1.17
SSSCA1-206ENST00000531405 MPHOSPH10O00566 681 aaKnown RBP22.34■■□□□ 1.17
SSSCA1-206ENST00000531405 COL6A1P12109 1028 aa22.34■■□□□ 1.17
SSSCA1-206ENST00000531405 BMP8BP34820 402 aa22.34■■□□□ 1.17
SSSCA1-206ENST00000531405 MAGEA10P43363 369 aaPredicted RBP22.34■■□□□ 1.17
SSSCA1-206ENST00000531405 HSP90AB4PQ58FF6 505 aa22.34■■□□□ 1.17
SSSCA1-206ENST00000531405 A0A1W2PRG0 241 aa22.33■■□□□ 1.17
SSSCA1-206ENST00000531405 TCRBV5S4A2TA0A5A2 114 aa22.33■■□□□ 1.17
SSSCA1-206ENST00000531405 GLRX3O76003 335 aaKnown RBP22.33■■□□□ 1.17
SSSCA1-206ENST00000531405 CYP2D6P10635 497 aa22.33■■□□□ 1.17
SSSCA1-206ENST00000531405 PTPREP23469 700 aa22.33■■□□□ 1.17
SSSCA1-206ENST00000531405 LBX2Q6XYB7 198 aa22.33■■□□□ 1.17
SSSCA1-206ENST00000531405 LCORLQ8N3X6 602 aa22.33■■□□□ 1.17
SSSCA1-206ENST00000531405 SLC44A5Q8NCS7 719 aa22.33■■□□□ 1.17
SSSCA1-206ENST00000531405 ZBED9Q6R2W3 1325 aa22.32■■□□□ 1.16
SSSCA1-206ENST00000531405 SLC15A5A6NIM6 579 aa22.32■■□□□ 1.16
SSSCA1-206ENST00000531405 SLFNL1Q499Z3 407 aa22.32■■□□□ 1.16
SSSCA1-206ENST00000531405 SIRT2Q8IXJ6 389 aa22.32■■□□□ 1.16
SSSCA1-206ENST00000531405 CLASRPQ8N2M8 674 aaKnown RBP22.32■■□□□ 1.16
SSSCA1-206ENST00000531405 KIF1BPQ96EK5 621 aa22.32■■□□□ 1.16
SSSCA1-206ENST00000531405 IFIT2P09913 472 aaKnown RBP22.31■■□□□ 1.16
SSSCA1-206ENST00000531405 GRB14Q14449 540 aa22.31■■□□□ 1.16
SSSCA1-206ENST00000531405 LRRC26Q2I0M4 334 aa22.31■■□□□ 1.16
SSSCA1-206ENST00000531405 NPLOC4Q8TAT6 608 aa22.31■■□□□ 1.16
SSSCA1-206ENST00000531405 ARMT1Q9H993 441 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms