RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 C12orf42Q96LP6 360 aa25.77■■□□□ 1.72
CHKA-206ENST00000531341 DBNLQ9UJU6 430 aaKnown RBP25.77■■□□□ 1.72
CHKA-206ENST00000531341 RABGAP1Q9Y3P9 1069 aa25.77■■□□□ 1.72
CHKA-206ENST00000531341 IPO8O15397 1037 aaKnown RBP25.76■■□□□ 1.71
CHKA-206ENST00000531341 CATSPERGQ6ZRH7 1159 aa25.76■■□□□ 1.71
CHKA-206ENST00000531341 SSH3Q8TE77 659 aa25.76■■□□□ 1.71
CHKA-206ENST00000531341 ZNF512BQ96KM6 892 aaPredicted RBP25.76■■□□□ 1.71
CHKA-206ENST00000531341 CCDC8Q9H0W5 538 aaPredicted RBP25.76■■□□□ 1.71
CHKA-206ENST00000531341 C1orf115Q9H7X2 142 aa25.76■■□□□ 1.71
CHKA-206ENST00000531341 BTBD7Q9P203 1132 aa25.76■■□□□ 1.71
CHKA-206ENST00000531341 USP17L15C9J2P7 530 aa25.75■■□□□ 1.71
CHKA-206ENST00000531341 USP17L13C9JLJ4 530 aa25.75■■□□□ 1.71
CHKA-206ENST00000531341 USP17L11C9JVI0 530 aa25.75■■□□□ 1.71
CHKA-206ENST00000531341 USP17L18D6R9N7 530 aa25.75■■□□□ 1.71
CHKA-206ENST00000531341 USP17L22D6RA61 530 aa25.75■■□□□ 1.71
CHKA-206ENST00000531341 USP17L17D6RBQ6 530 aa25.75■■□□□ 1.71
CHKA-206ENST00000531341 USP17L19D6RCP7 530 aa25.75■■□□□ 1.71
CHKA-206ENST00000531341 USP17L20D6RJB6 530 aa25.75■■□□□ 1.71
CHKA-206ENST00000531341 SURF6O75683 361 aaKnown RBP25.75■■□□□ 1.71
CHKA-206ENST00000531341 ATP8B2P98198 1209 aa25.75■■□□□ 1.71
CHKA-206ENST00000531341 USP17L24Q0WX57 530 aa25.75■■□□□ 1.71
CHKA-206ENST00000531341 OS9Q13438 667 aaPredicted RBP25.75■■□□□ 1.71
CHKA-206ENST00000531341 SENP6Q9GZR1 1112 aaPredicted RBP25.75■■□□□ 1.71
CHKA-206ENST00000531341 PTPREP23469 700 aa25.74■■□□□ 1.71
CHKA-206ENST00000531341 NPLOC4Q8TAT6 608 aa25.74■■□□□ 1.71
CHKA-206ENST00000531341 CWC22Q9HCG8 908 aaKnown RBP25.74■■□□□ 1.71
CHKA-206ENST00000531341 CUL9Q8IWT3 2517 aa25.73■■□□□ 1.71
CHKA-206ENST00000531341 RAB3GAP1Q15042 981 aa25.73■■□□□ 1.71
CHKA-206ENST00000531341 WDR78Q5VTH9 848 aa25.73■■□□□ 1.71
CHKA-206ENST00000531341 TRPV1Q8NER1 839 aa25.73■■□□□ 1.71
CHKA-206ENST00000531341 FEZ1Q99689 392 aa25.73■■□□□ 1.71
CHKA-206ENST00000531341 ANTXR1Q9H6X2 564 aa25.73■■□□□ 1.71
CHKA-206ENST00000531341 IDH1O75874 414 aaKnown RBP25.72■■□□□ 1.71
CHKA-206ENST00000531341 VCAM1P19320 739 aa25.72■■□□□ 1.71
CHKA-206ENST00000531341 USP5P45974 858 aa25.72■■□□□ 1.71
CHKA-206ENST00000531341 ATN1P54259 1190 aaPredicted RBP25.72■■□□□ 1.71
CHKA-206ENST00000531341 MAGEB6Q8N7X4 407 aa25.72■■□□□ 1.71
CHKA-206ENST00000531341 EAF2Q96CJ1 260 aaPredicted RBP25.72■■□□□ 1.71
CHKA-206ENST00000531341 PRUNE2Q8WUY3 3088 aa25.71■■□□□ 1.71
CHKA-206ENST00000531341 SLC15A5A6NIM6 579 aa25.71■■□□□ 1.71
CHKA-206ENST00000531341 POTEB2H3BUK9 544 aa25.71■■□□□ 1.71
CHKA-206ENST00000531341 CYP2C19P33261 490 aa25.71■■□□□ 1.71
CHKA-206ENST00000531341 GUCY1A2P33402 732 aa25.71■■□□□ 1.71
CHKA-206ENST00000531341 PLCD1P51178 756 aa25.71■■□□□ 1.71
CHKA-206ENST00000531341 EVX2Q03828 476 aa25.71■■□□□ 1.71
CHKA-206ENST00000531341 CERKLQ49MI3 558 aaPredicted RBP25.71■■□□□ 1.71
CHKA-206ENST00000531341 MFSD14CQ5VZR4 134 aa25.71■■□□□ 1.71
CHKA-206ENST00000531341 GUCD1Q96NT3 240 aa25.71■■□□□ 1.71
CHKA-206ENST00000531341 KIAA1683Q9H0B3 1180 aa25.71■■□□□ 1.71
CHKA-206ENST00000531341 DDX20Q9UHI6 824 aaKnown RBP25.71■■□□□ 1.71
CHKA-206ENST00000531341 SERPINB13Q9UIV8 391 aa25.71■■□□□ 1.71
CHKA-206ENST00000531341 CNGA1P29973 690 aa25.7■■□□□ 1.7
CHKA-206ENST00000531341 CCNA1P78396 465 aa25.7■■□□□ 1.7
CHKA-206ENST00000531341 GRB14Q14449 540 aa25.7■■□□□ 1.7
CHKA-206ENST00000531341 EHD4Q9H223 541 aa25.7■■□□□ 1.7
CHKA-206ENST00000531341 CDH23Q9H251 3354 aa25.7■■□□□ 1.7
CHKA-206ENST00000531341 SPTBN5Q9NRC6 3674 aaKnown RBP25.69■■□□□ 1.7
CHKA-206ENST00000531341 SPDYE16A6NNV3 312 aaPredicted RBP25.69■■□□□ 1.7
CHKA-206ENST00000531341 IGHA2P01877 340 aa25.69■■□□□ 1.7
CHKA-206ENST00000531341 HOXC6P09630 235 aa25.69■■□□□ 1.7
CHKA-206ENST00000531341 SHMT1P34896 483 aa25.69■■□□□ 1.7
CHKA-206ENST00000531341 ATP2B2Q01814 1243 aa25.69■■□□□ 1.7
CHKA-206ENST00000531341 ABCB5Q2M3G0 1257 aa25.69■■□□□ 1.7
CHKA-206ENST00000531341 LBX2Q6XYB7 198 aa25.69■■□□□ 1.7
CHKA-206ENST00000531341 FAM161BQ96MY7 647 aa25.69■■□□□ 1.7
CHKA-206ENST00000531341 RPAP3Q9H6T3 665 aaPredicted RBP25.69■■□□□ 1.7
CHKA-206ENST00000531341 NOP58Q9Y2X3 529 aaKnown RBP25.69■■□□□ 1.7
CHKA-206ENST00000531341 FRMPD3Q5JV73 1810 aa25.69■■□□□ 1.7
CHKA-206ENST00000531341 IGSF3O75054 1194 aa25.68■■□□□ 1.7
CHKA-206ENST00000531341 GLRX3O76003 335 aaKnown RBP25.68■■□□□ 1.7
CHKA-206ENST00000531341 USP14P54578 494 aa25.68■■□□□ 1.7
CHKA-206ENST00000531341 LPAR1Q92633 364 aa25.68■■□□□ 1.7
CHKA-206ENST00000531341 MYH1P12882 1939 aa25.68■■□□□ 1.7
CHKA-206ENST00000531341 COL25A1Q9BXS0 654 aaPredicted RBP25.67■■□□□ 1.7
CHKA-206ENST00000531341 A0A1W2PRG0 241 aa25.66■■□□□ 1.7
CHKA-206ENST00000531341 GJC2Q5T442 439 aaPredicted RBP25.66■■□□□ 1.7
CHKA-206ENST00000531341 DNM1LO00429 736 aa25.65■■□□□ 1.7
CHKA-206ENST00000531341 CYBAP13498 195 aa25.65■■□□□ 1.7
CHKA-206ENST00000531341 RTP1P59025 263 aa25.65■■□□□ 1.7
CHKA-206ENST00000531341 SEPT2Q15019 361 aa25.65■■□□□ 1.7
CHKA-206ENST00000531341 ANO1Q5XXA6 986 aa25.65■■□□□ 1.7
CHKA-206ENST00000531341 ZKSCAN2Q63HK3 967 aa25.65■■□□□ 1.7
CHKA-206ENST00000531341 TTC6Q86TZ1 520 aa25.65■■□□□ 1.7
CHKA-206ENST00000531341 LBHD1Q9BQE6 289 aaPredicted RBP25.65■■□□□ 1.7
CHKA-206ENST00000531341 RIOK1Q9BRS2 568 aaKnown RBP25.65■■□□□ 1.7
CHKA-206ENST00000531341 IVNS1ABPQ9Y6Y0 642 aa25.65■■□□□ 1.7
CHKA-206ENST00000531341 FAM109BQ6ICB4 259 aaPredicted RBP25.64■■□□□ 1.7
CHKA-206ENST00000531341 MOV10L1Q9BXT6 1211 aaKnown RBP25.64■■□□□ 1.7
CHKA-206ENST00000531341 CABP5Q9NP86 173 aa25.64■■□□□ 1.7
CHKA-206ENST00000531341 MSCO60682 206 aa25.63■■□□□ 1.69
CHKA-206ENST00000531341 GABPAQ06546 454 aa25.63■■□□□ 1.69
CHKA-206ENST00000531341 KIAA1755Q5JYT7 1200 aa25.63■■□□□ 1.69
CHKA-206ENST00000531341 ATP11BQ9Y2G3 1177 aa25.63■■□□□ 1.69
CHKA-206ENST00000531341 RLBP1P12271 317 aa25.62■■□□□ 1.69
CHKA-206ENST00000531341 ADORA2AP29274 412 aa25.62■■□□□ 1.69
CHKA-206ENST00000531341 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.62■■□□□ 1.69
CHKA-206ENST00000531341 COBLO75128 1261 aa25.61■■□□□ 1.69
CHKA-206ENST00000531341 POLR3DP05423 398 aaPredicted RBP25.61■■□□□ 1.69
CHKA-206ENST00000531341 MAP3K12Q12852 859 aa25.61■■□□□ 1.69
CHKA-206ENST00000531341 SHHQ15465 462 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms