RNA–Protein interactions for RNA: ENST00000531333.5

CASP4-209, Transcript of caspase 4, humanhuman

TSL 4

Gene CASP4, Length 667 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-209ENST00000531333 GAB4Q2WGN9 574 aa9.14□□□□□ -0.95
CASP4-209ENST00000531333 ALG1LQ6GMV1 187 aa9.14□□□□□ -0.95
CASP4-209ENST00000531333 DUSP15Q9H1R2 295 aaPredicted RBP9.14□□□□□ -0.95
CASP4-209ENST00000531333 C12orf49Q9H741 205 aa9.14□□□□□ -0.95
CASP4-209ENST00000531333 TTBK2Q6IQ55 1244 aa9.13□□□□□ -0.95
CASP4-209ENST00000531333 MRPL41Q8IXM3 137 aaKnown RBP9.13□□□□□ -0.95
CASP4-209ENST00000531333 Q96M66 194 aa9.13□□□□□ -0.95
CASP4-209ENST00000531333 RNF32Q9H0A6 362 aa9.13□□□□□ -0.95
CASP4-209ENST00000531333 TACC3Q9Y6A5 838 aa9.13□□□□□ -0.95
CASP4-209ENST00000531333 NUAK1O60285 661 aa9.12□□□□□ -0.95
CASP4-209ENST00000531333 TRHRP34981 398 aaPredicted RBP9.12□□□□□ -0.95
CASP4-209ENST00000531333 CTSWP56202 376 aa9.12□□□□□ -0.95
CASP4-209ENST00000531333 CREG2Q8IUH2 290 aa9.12□□□□□ -0.95
CASP4-209ENST00000531333 C20orf173Q96LM9 149 aa9.12□□□□□ -0.95
CASP4-209ENST00000531333 SPG7Q9UQ90 795 aa9.12□□□□□ -0.95
CASP4-209ENST00000531333 HOXA5P20719 270 aa9.11□□□□□ -0.95
CASP4-209ENST00000531333 PDE4CQ08493 712 aa9.11□□□□□ -0.95
CASP4-209ENST00000531333 DPH2Q9BQC3 489 aaPredicted RBP9.11□□□□□ -0.95
CASP4-209ENST00000531333 TJP2Q9UDY2 1190 aa9.11□□□□□ -0.95
CASP4-209ENST00000531333 DNAJB8Q8NHS0 232 aa9.1□□□□□ -0.95
CASP4-209ENST00000531333 TPP2P29144 1249 aaPredicted RBP9.09□□□□□ -0.95
CASP4-209ENST00000531333 ETV3P41162 512 aa9.09□□□□□ -0.95
CASP4-209ENST00000531333 RPS26P62854 115 aaKnown RBP9.09□□□□□ -0.95
CASP4-209ENST00000531333 SLC6A19Q695T7 634 aa9.09□□□□□ -0.95
CASP4-209ENST00000531333 IRF2BPLQ9H1B7 796 aa9.09□□□□□ -0.95
CASP4-209ENST00000531333 C19orf44Q9H6X5 657 aa9.09□□□□□ -0.95
CASP4-209ENST00000531333 PCDHB5Q9Y5E4 795 aa9.09□□□□□ -0.95
CASP4-209ENST00000531333 ZGLP1P0C6A0 271 aa9.08□□□□□ -0.96
CASP4-209ENST00000531333 SEPT6Q14141 434 aa9.08□□□□□ -0.96
CASP4-209ENST00000531333 PDZD8Q8NEN9 1154 aa9.08□□□□□ -0.96
CASP4-209ENST00000531333 TMEM87BQ96K49 555 aa9.08□□□□□ -0.96
CASP4-209ENST00000531333 MCOLN1Q9GZU1 580 aa9.08□□□□□ -0.96
CASP4-209ENST00000531333 TTF2Q9UNY4 1162 aaKnown RBP9.08□□□□□ -0.96
CASP4-209ENST00000531333 IRF2BP1Q8IU81 584 aa9.07□□□□□ -0.96
CASP4-209ENST00000531333 TRIT1Q9H3H1 467 aaKnown RBP9.07□□□□□ -0.96
CASP4-209ENST00000531333 MYOCOSA0A1B0GUC4 107 aa9.06□□□□□ -0.96
CASP4-209ENST00000531333 PGRP06401 933 aa9.06□□□□□ -0.96
CASP4-209ENST00000531333 DLG4P78352 724 aa9.06□□□□□ -0.96
CASP4-209ENST00000531333 TIGD5Q53EQ6 642 aa9.06□□□□□ -0.96
CASP4-209ENST00000531333 ZSCAN29Q8IWY8 852 aaPredicted RBP9.06□□□□□ -0.96
CASP4-209ENST00000531333 ASB16Q96NS5 453 aa9.06□□□□□ -0.96
CASP4-209ENST00000531333 GPR62Q9BZJ7 368 aa9.06□□□□□ -0.96
CASP4-209ENST00000531333 CEP131Q9UPN4 1083 aa9.06□□□□□ -0.96
CASP4-209ENST00000531333 ATP2B2Q01814 1243 aa9.05□□□□□ -0.96
CASP4-209ENST00000531333 MCATQ8IVS2 390 aaKnown RBP9.05□□□□□ -0.96
CASP4-209ENST00000531333 LILRA2Q8N149 483 aa9.05□□□□□ -0.96
CASP4-209ENST00000531333 BAHD1Q8TBE0 780 aaPredicted RBP9.05□□□□□ -0.96
CASP4-209ENST00000531333 PPP1R13LQ8WUF5 828 aa9.05□□□□□ -0.96
CASP4-209ENST00000531333 PARD6AQ9NPB6 346 aa9.05□□□□□ -0.96
CASP4-209ENST00000531333 DUSP13Q9UII6 198 aa9.05□□□□□ -0.96
CASP4-209ENST00000531333 PEX10O60683 326 aa9.04□□□□□ -0.96
CASP4-209ENST00000531333 EGR3Q06889 387 aa9.04□□□□□ -0.96
CASP4-209ENST00000531333 NR0B2Q15466 257 aa9.04□□□□□ -0.96
CASP4-209ENST00000531333 TSPYL5Q86VY4 417 aaPredicted RBP9.04□□□□□ -0.96
CASP4-209ENST00000531333 SLC6A17Q9H1V8 727 aa9.04□□□□□ -0.96
CASP4-209ENST00000531333 GPATCH2Q9NW75 528 aa9.04□□□□□ -0.96
CASP4-209ENST00000531333 AGMOQ6ZNB7 445 aa9.03□□□□□ -0.96
CASP4-209ENST00000531333 OXR1Q8N573 874 aa9.03□□□□□ -0.96
CASP4-209ENST00000531333 DTWD2Q8NBA8 298 aa9.03□□□□□ -0.96
CASP4-209ENST00000531333 ACSF2Q96CM8 615 aaPredicted RBP9.03□□□□□ -0.96
CASP4-209ENST00000531333 FITM1A5D6W6 292 aa9.02□□□□□ -0.97
CASP4-209ENST00000531333 SEMA7AO75326 666 aa9.02□□□□□ -0.97
CASP4-209ENST00000531333 ZNF605Q86T29 641 aa9.02□□□□□ -0.97
CASP4-209ENST00000531333 RELTQ969Z4 430 aa9.02□□□□□ -0.97
CASP4-209ENST00000531333 FRMD6Q96NE9 622 aa9.02□□□□□ -0.97
CASP4-209ENST00000531333 ZNF552Q9H707 407 aaPredicted RBP9.02□□□□□ -0.97
CASP4-209ENST00000531333 CWC22Q9HCG8 908 aaKnown RBP9.02□□□□□ -0.97
CASP4-209ENST00000531333 ADAM30Q9UKF2 790 aa9.02□□□□□ -0.97
CASP4-209ENST00000531333 YBX2Q9Y2T7 364 aaKnown RBP9.02□□□□□ -0.97
CASP4-209ENST00000531333 BRD1O95696 1058 aa9.01□□□□□ -0.97
CASP4-209ENST00000531333 CCDC85BQ15834 202 aaPredicted RBP9.01□□□□□ -0.97
CASP4-209ENST00000531333 INTS4Q96HW7 963 aaKnown RBP9.01□□□□□ -0.97
CASP4-209ENST00000531333 GCM1Q9NP62 436 aa9.01□□□□□ -0.97
CASP4-209ENST00000531333 PCDHA11Q9Y5I1 949 aa9.01□□□□□ -0.97
CASP4-209ENST00000531333 P4HBP07237 508 aaKnown RBP9□□□□□ -0.97
CASP4-209ENST00000531333 PDE4BQ07343 736 aa9□□□□□ -0.97
CASP4-209ENST00000531333 A0A0G2JLL6 359 aaPredicted RBP8.99□□□□□ -0.97
CASP4-209ENST00000531333 TEX51A0A1B0GUA7 166 aa8.99□□□□□ -0.97
CASP4-209ENST00000531333 BMP7P18075 431 aa8.99□□□□□ -0.97
CASP4-209ENST00000531333 LMNB1P20700 586 aa8.99□□□□□ -0.97
CASP4-209ENST00000531333 LIG3P49916 1009 aa8.99□□□□□ -0.97
CASP4-209ENST00000531333 DHX38Q92620 1227 aaKnown RBP8.99□□□□□ -0.97
CASP4-209ENST00000531333 SHISA4Q96DD7 197 aa8.99□□□□□ -0.97
CASP4-209ENST00000531333 KCNC2Q96PR1 638 aa8.99□□□□□ -0.97
CASP4-209ENST00000531333 EBF1Q9UH73 591 aa8.99□□□□□ -0.97
CASP4-209ENST00000531333 EIF4BP23588 611 aaKnown RBP8.98□□□□□ -0.97
CASP4-209ENST00000531333 RPL6Q02878 288 aaKnown RBP8.98□□□□□ -0.97
CASP4-209ENST00000531333 TSNAXIP1Q2TAA8 658 aa8.98□□□□□ -0.97
CASP4-209ENST00000531333 CYB5D2Q8WUJ1 264 aa8.98□□□□□ -0.97
CASP4-209ENST00000531333 MIR1-1HGQ9H1L0 117 aa8.98□□□□□ -0.97
CASP4-209ENST00000531333 ZCCHC4Q9H5U6 513 aa8.98□□□□□ -0.97
CASP4-209ENST00000531333 KCNH3Q9ULD8 1083 aa8.98□□□□□ -0.97
CASP4-209ENST00000531333 LDHBP07195 334 aaKnown RBP8.97□□□□□ -0.97
CASP4-209ENST00000531333 TFE3P19532 575 aaPredicted RBP8.97□□□□□ -0.97
CASP4-209ENST00000531333 LTKP29376 864 aa8.97□□□□□ -0.97
CASP4-209ENST00000531333 GNA15P30679 374 aa8.97□□□□□ -0.97
CASP4-209ENST00000531333 SNX17Q15036 470 aa8.97□□□□□ -0.97
CASP4-209ENST00000531333 ARID3AQ99856 593 aa8.97□□□□□ -0.97
CASP4-209ENST00000531333 SGPP1Q9BX95 441 aa8.97□□□□□ -0.97
CASP4-209ENST00000531333 CNOT6Q9ULM6 557 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms