RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 C16orf86Q6ZW13 317 aa11.57□□□□□ -0.56
CTNND1-228ENST00000531007 MAPKAPK5Q8IW41 473 aa11.57□□□□□ -0.56
CTNND1-228ENST00000531007 RGS22Q8NE09 1264 aa11.57□□□□□ -0.56
CTNND1-228ENST00000531007 BRF1Q92994 677 aa11.57□□□□□ -0.56
CTNND1-228ENST00000531007 GTF3C6Q969F1 213 aa11.57□□□□□ -0.56
CTNND1-228ENST00000531007 MXD3Q9BW11 206 aa11.57□□□□□ -0.56
CTNND1-228ENST00000531007 OSBPL5Q9H0X9 879 aaPredicted RBP11.57□□□□□ -0.56
CTNND1-228ENST00000531007 SLKQ9H2G2 1235 aaPredicted RBP11.57□□□□□ -0.56
CTNND1-228ENST00000531007 MKNK2Q9HBH9 465 aa11.57□□□□□ -0.56
CTNND1-228ENST00000531007 TCP11L1Q9NUJ3 509 aa11.57□□□□□ -0.56
CTNND1-228ENST00000531007 ZSWIM5Q9P217 1185 aa11.57□□□□□ -0.56
CTNND1-228ENST00000531007 RABGEF1Q9UJ41 708 aa11.57□□□□□ -0.56
CTNND1-228ENST00000531007 TPCN1Q9ULQ1 816 aa11.57□□□□□ -0.56
CTNND1-228ENST00000531007 DDX60LQ5H9U9 1706 aaKnown RBP11.57□□□□□ -0.56
CTNND1-228ENST00000531007 NEDD4P46934 1319 aa11.57□□□□□ -0.56
CTNND1-228ENST00000531007 COL4A5P29400 1685 aa11.56□□□□□ -0.56
CTNND1-228ENST00000531007 IFIT3O14879 490 aaKnown RBP11.56□□□□□ -0.56
CTNND1-228ENST00000531007 PDCP20941 246 aa11.56□□□□□ -0.56
CTNND1-228ENST00000531007 ANTXR2P58335 489 aa11.56□□□□□ -0.56
CTNND1-228ENST00000531007 ZNF280AP59817 542 aaPredicted RBP11.56□□□□□ -0.56
CTNND1-228ENST00000531007 HMGN5P82970 282 aaKnown RBP11.56□□□□□ -0.56
CTNND1-228ENST00000531007 ME3Q16798 604 aa11.56□□□□□ -0.56
CTNND1-228ENST00000531007 PROX2Q3B8N5 592 aa11.56□□□□□ -0.56
CTNND1-228ENST00000531007 TMEM67Q5HYA8 995 aa11.56□□□□□ -0.56
CTNND1-228ENST00000531007 FOXP4Q8IVH2 680 aaPredicted RBP11.56□□□□□ -0.56
CTNND1-228ENST00000531007 ZNF444Q8N0Y2 327 aaPredicted RBP11.56□□□□□ -0.56
CTNND1-228ENST00000531007 IGDCC4Q8TDY8 1250 aa11.56□□□□□ -0.56
CTNND1-228ENST00000531007 TOMM22Q9NS69 142 aa11.56□□□□□ -0.56
CTNND1-228ENST00000531007 PI4KBQ9UBF8 816 aa11.56□□□□□ -0.56
CTNND1-228ENST00000531007 ZC3H4Q9UPT8 1303 aaKnown RBP11.56□□□□□ -0.56
CTNND1-228ENST00000531007 ECM29Q5VYK3 1845 aa11.56□□□□□ -0.56
CTNND1-228ENST00000531007 NID2Q14112 1375 aa11.55□□□□□ -0.56
CTNND1-228ENST00000531007 ATRNL1Q5VV63 1379 aa11.55□□□□□ -0.56
CTNND1-228ENST00000531007 CDK5RAP2Q96SN8 1893 aa11.55□□□□□ -0.56
CTNND1-228ENST00000531007 BAZ2AQ9UIF9 1905 aaKnown RBP11.55□□□□□ -0.56
CTNND1-228ENST00000531007 DICER1Q9UPY3 1922 aaKnown RBP11.55□□□□□ -0.56
CTNND1-228ENST00000531007 CCDC196A0A1B0GTZ2 297 aa11.55□□□□□ -0.56
CTNND1-228ENST00000531007 CCDC69A6NI79 296 aa11.55□□□□□ -0.56
CTNND1-228ENST00000531007 GRIN3BO60391 1043 aa11.55□□□□□ -0.56
CTNND1-228ENST00000531007 RANBP6O60518 1105 aaKnown RBP11.55□□□□□ -0.56
CTNND1-228ENST00000531007 CDKL5O76039 1030 aa11.55□□□□□ -0.56
CTNND1-228ENST00000531007 CALM1P0DP23 149 aa11.55□□□□□ -0.56
CTNND1-228ENST00000531007 CALM2P0DP24 149 aa11.55□□□□□ -0.56
CTNND1-228ENST00000531007 CALM3P0DP25 149 aa11.55□□□□□ -0.56
CTNND1-228ENST00000531007 OSBPP22059 807 aa11.55□□□□□ -0.56
CTNND1-228ENST00000531007 WTAPQ15007 396 aa11.55□□□□□ -0.56
CTNND1-228ENST00000531007 TSR1Q2NL82 804 aaKnown RBP11.55□□□□□ -0.56
CTNND1-228ENST00000531007 CPLX2Q6PUV4 134 aaKnown RBP11.55□□□□□ -0.56
CTNND1-228ENST00000531007 CYB5R4Q7L1T6 521 aa11.55□□□□□ -0.56
CTNND1-228ENST00000531007 FAM83AQ86UY5 434 aa11.55□□□□□ -0.56
CTNND1-228ENST00000531007 DGKHQ86XP1 1220 aa11.55□□□□□ -0.56
CTNND1-228ENST00000531007 GPC2Q8N158 579 aa11.55□□□□□ -0.56
CTNND1-228ENST00000531007 ANKS1AQ92625 1134 aa11.55□□□□□ -0.56
CTNND1-228ENST00000531007 ZBED3Q96IU2 234 aaPredicted RBP11.55□□□□□ -0.56
CTNND1-228ENST00000531007 CCDC17Q96LX7 622 aa11.55□□□□□ -0.56
CTNND1-228ENST00000531007 ZSCAN10Q96SZ4 725 aaPredicted RBP11.55□□□□□ -0.56
CTNND1-228ENST00000531007 SERPINB13Q9UIV8 391 aa11.55□□□□□ -0.56
CTNND1-228ENST00000531007 SMC3Q9UQE7 1217 aa11.55□□□□□ -0.56
CTNND1-228ENST00000531007 TSPY2A6NKD2 308 aa11.54□□□□□ -0.56
CTNND1-228ENST00000531007 GOLGA8CPA6NN73 597 aa11.54□□□□□ -0.56
CTNND1-228ENST00000531007 YBX3P16989 372 aaKnown RBP eCLIP11.54□□□□□ -0.56
CTNND1-228ENST00000531007 PDIA3P30101 505 aaKnown RBP11.54□□□□□ -0.56
CTNND1-228ENST00000531007 TNNI2P48788 182 aa11.54□□□□□ -0.56
CTNND1-228ENST00000531007 RASSF7Q02833 373 aa11.54□□□□□ -0.56
CTNND1-228ENST00000531007 GABPAQ06546 454 aa11.54□□□□□ -0.56
CTNND1-228ENST00000531007 TNFAIP1Q13829 316 aa11.54□□□□□ -0.56
CTNND1-228ENST00000531007 RRP12Q5JTH9 1297 aaKnown RBP11.54□□□□□ -0.56
CTNND1-228ENST00000531007 TCEANC2Q96MN5 208 aa11.54□□□□□ -0.56
CTNND1-228ENST00000531007 LY9Q9HBG7 655 aa11.54□□□□□ -0.56
CTNND1-228ENST00000531007 MYOZ2Q9NPC6 264 aa11.54□□□□□ -0.56
CTNND1-228ENST00000531007 HERC5Q9UII4 1024 aaKnown RBP11.54□□□□□ -0.56
CTNND1-228ENST00000531007 SLC12A7Q9Y666 1083 aa11.54□□□□□ -0.56
CTNND1-228ENST00000531007 MYH1P12882 1939 aa11.54□□□□□ -0.56
CTNND1-228ENST00000531007 KLF18A0A0U1RQI7 1052 aa11.53□□□□□ -0.56
CTNND1-228ENST00000531007 H7C1D1 291 aa11.53□□□□□ -0.56
CTNND1-228ENST00000531007 DDAH1O94760 285 aa11.53□□□□□ -0.56
CTNND1-228ENST00000531007 TSPY3P0CV98 308 aa11.53□□□□□ -0.56
CTNND1-228ENST00000531007 TSPY8P0CW00 308 aa11.53□□□□□ -0.56
CTNND1-228ENST00000531007 CDK8P49336 464 aa11.53□□□□□ -0.56
CTNND1-228ENST00000531007 PLCD1P51178 756 aa11.53□□□□□ -0.56
CTNND1-228ENST00000531007 APOBRQ0VD83 1088 aa11.53□□□□□ -0.56
CTNND1-228ENST00000531007 PICALMQ13492 652 aa11.53□□□□□ -0.56
CTNND1-228ENST00000531007 SEC23AQ15436 765 aa11.53□□□□□ -0.56
CTNND1-228ENST00000531007 IFIT1BQ5T764 474 aaKnown RBP11.53□□□□□ -0.56
CTNND1-228ENST00000531007 NFXL1Q6ZNB6 911 aa11.53□□□□□ -0.56
CTNND1-228ENST00000531007 NOL8Q76FK4 1167 aaKnown RBP11.53□□□□□ -0.56
CTNND1-228ENST00000531007 METTL16Q86W50 562 aaKnown RBP11.53□□□□□ -0.56
CTNND1-228ENST00000531007 CCDC83Q8IWF9 413 aa11.53□□□□□ -0.56
CTNND1-228ENST00000531007 NEDD1Q8NHV4 660 aa11.53□□□□□ -0.56
CTNND1-228ENST00000531007 FAM151AQ8WW52 585 aa11.53□□□□□ -0.56
CTNND1-228ENST00000531007 KCTD12Q96CX2 325 aaKnown RBP11.53□□□□□ -0.56
CTNND1-228ENST00000531007 PRMT6Q96LA8 375 aaPredicted RBP11.53□□□□□ -0.56
CTNND1-228ENST00000531007 MAP3K14Q99558 947 aa11.53□□□□□ -0.56
CTNND1-228ENST00000531007 HCSTQ9UBK5 93 aa11.53□□□□□ -0.56
CTNND1-228ENST00000531007 PLIN4Q96Q06 1357 aa11.53□□□□□ -0.56
CTNND1-228ENST00000531007 CYP2D7A0A087X1C5 515 aa11.52□□□□□ -0.57
CTNND1-228ENST00000531007 ZBTB43O43298 467 aa11.52□□□□□ -0.57
CTNND1-228ENST00000531007 CYP2D6P10635 497 aa11.52□□□□□ -0.57
CTNND1-228ENST00000531007 YY1P25490 414 aa11.52□□□□□ -0.57
CTNND1-228ENST00000531007 TFAP4Q01664 338 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms