RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 RBM47A0AV96 593 aaKnown RBP8.01□□□□□ -1.13
USP47-209ENST00000530041 ZP2Q05996 745 aa8.01□□□□□ -1.13
USP47-209ENST00000530041 TNK2Q07912 1038 aa8.01□□□□□ -1.13
USP47-209ENST00000530041 CWF19L2Q2TBE0 894 aaKnown RBP8.01□□□□□ -1.13
USP47-209ENST00000530041 THAP5Q7Z6K1 395 aa8.01□□□□□ -1.13
USP47-209ENST00000530041 ZNF296Q8WUU4 475 aaPredicted RBP8.01□□□□□ -1.13
USP47-209ENST00000530041 RC3H2Q9HBD1 1191 aaKnown RBP8.01□□□□□ -1.13
USP47-209ENST00000530041 LMCD1Q9NZU5 365 aa8.01□□□□□ -1.13
USP47-209ENST00000530041 H3BS24 57 aa8□□□□□ -1.13
USP47-209ENST00000530041 BIN1O00499 593 aa8□□□□□ -1.13
USP47-209ENST00000530041 TLR3O15455 904 aaKnown RBP8□□□□□ -1.13
USP47-209ENST00000530041 PIWIL2Q8TC59 973 aaKnown RBP8□□□□□ -1.13
USP47-209ENST00000530041 BACH2Q9BYV9 841 aa8□□□□□ -1.13
USP47-209ENST00000530041 ADAMTS1Q9UHI8 967 aa8□□□□□ -1.13
USP47-209ENST00000530041 RNF114Q9Y508 228 aa8□□□□□ -1.13
USP47-209ENST00000530041 CHURC1-FNTBB4DL54 471 aa7.99□□□□□ -1.13
USP47-209ENST00000530041 PAPLNO95428 1278 aa7.99□□□□□ -1.13
USP47-209ENST00000530041 ATG4DQ86TL0 474 aaPredicted RBP7.99□□□□□ -1.13
USP47-209ENST00000530041 LRRN4CLQ8ND94 238 aa7.99□□□□□ -1.13
USP47-209ENST00000530041 ASIC4Q96FT7 647 aa7.99□□□□□ -1.13
USP47-209ENST00000530041 ATP13A1Q9HD20 1204 aa7.99□□□□□ -1.13
USP47-209ENST00000530041 KLHL3Q9UH77 587 aa7.99□□□□□ -1.13
USP47-209ENST00000530041 RBAK-RBAKDNI3L0D1 243 aa7.98□□□□□ -1.13
USP47-209ENST00000530041 DNAJA2O60884 412 aa7.98□□□□□ -1.13
USP47-209ENST00000530041 MLECQ14165 292 aa7.98□□□□□ -1.13
USP47-209ENST00000530041 UBE2FQ969M7 185 aa7.98□□□□□ -1.13
USP47-209ENST00000530041 CCDC74BQ96LY2 380 aa7.98□□□□□ -1.13
USP47-209ENST00000530041 Q96M66 194 aa7.98□□□□□ -1.13
USP47-209ENST00000530041 BRMS1Q9HCU9 246 aa7.98□□□□□ -1.13
USP47-209ENST00000530041 PRDM7Q9NQW5 492 aa7.98□□□□□ -1.13
USP47-209ENST00000530041 ATE1O95260 518 aa7.97□□□□□ -1.13
USP47-209ENST00000530041 ZNF76P36508 570 aa7.97□□□□□ -1.13
USP47-209ENST00000530041 TXKP42681 527 aa7.97□□□□□ -1.13
USP47-209ENST00000530041 CRKP46108 304 aa7.97□□□□□ -1.13
USP47-209ENST00000530041 TRIM26Q12899 539 aaPredicted RBP7.97□□□□□ -1.13
USP47-209ENST00000530041 CARS2Q9HA77 564 aaKnown RBP7.97□□□□□ -1.13
USP47-209ENST00000530041 METTL5Q9NRN9 209 aaKnown RBP7.97□□□□□ -1.13
USP47-209ENST00000530041 PCDHB14Q9Y5E9 798 aa7.97□□□□□ -1.13
USP47-209ENST00000530041 TNNI2P48788 182 aa7.96□□□□□ -1.14
USP47-209ENST00000530041 PHACTR4Q8IZ21 702 aa7.96□□□□□ -1.14
USP47-209ENST00000530041 RNF141Q8WVD5 230 aa7.96□□□□□ -1.14
USP47-209ENST00000530041 NT5C1AQ9BXI3 368 aa7.96□□□□□ -1.14
USP47-209ENST00000530041 KRTAP9-2Q9BYQ4 174 aa7.96□□□□□ -1.14
USP47-209ENST00000530041 UBP1Q9NZI7 540 aa7.96□□□□□ -1.14
USP47-209ENST00000530041 ZSWIM5Q9P217 1185 aa7.96□□□□□ -1.14
USP47-209ENST00000530041 SLC22A31A6NKX4 558 aa7.95□□□□□ -1.14
USP47-209ENST00000530041 FANCCQ00597 558 aa7.95□□□□□ -1.14
USP47-209ENST00000530041 APOBRQ0VD83 1088 aa7.95□□□□□ -1.14
USP47-209ENST00000530041 FLAD1Q8NFF5 587 aa7.95□□□□□ -1.14
USP47-209ENST00000530041 BAHD1Q8TBE0 780 aaPredicted RBP7.95□□□□□ -1.14
USP47-209ENST00000530041 EHMT1Q9H9B1 1298 aa7.95□□□□□ -1.14
USP47-209ENST00000530041 KCNH3Q9ULD8 1083 aa7.95□□□□□ -1.14
USP47-209ENST00000530041 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.94□□□□□ -1.14
USP47-209ENST00000530041 VAMP1P23763 118 aa7.94□□□□□ -1.14
USP47-209ENST00000530041 SEZ6Q53EL9 994 aa7.94□□□□□ -1.14
USP47-209ENST00000530041 TMPRSS7Q7RTY8 843 aa7.94□□□□□ -1.14
USP47-209ENST00000530041 KIAA0825Q8IV33 1275 aa7.94□□□□□ -1.14
USP47-209ENST00000530041 REXO1Q8N1G1 1221 aaKnown RBP7.94□□□□□ -1.14
USP47-209ENST00000530041 DTWD2Q8NBA8 298 aa7.94□□□□□ -1.14
USP47-209ENST00000530041 KREMEN1Q96MU8 473 aa7.94□□□□□ -1.14
USP47-209ENST00000530041 KIF2CQ99661 725 aa7.94□□□□□ -1.14
USP47-209ENST00000530041 SPON2Q9BUD6 331 aa7.94□□□□□ -1.14
USP47-209ENST00000530041 GPR62Q9BZJ7 368 aa7.94□□□□□ -1.14
USP47-209ENST00000530041 DUSP15Q9H1R2 295 aaPredicted RBP7.94□□□□□ -1.14
USP47-209ENST00000530041 TRIT1Q9H3H1 467 aaKnown RBP7.94□□□□□ -1.14
USP47-209ENST00000530041 GMIPQ9P107 970 aa7.94□□□□□ -1.14
USP47-209ENST00000530041 RGS13O14921 159 aa7.93□□□□□ -1.14
USP47-209ENST00000530041 SRFP11831 508 aa7.93□□□□□ -1.14
USP47-209ENST00000530041 GBP1P32455 592 aa7.93□□□□□ -1.14
USP47-209ENST00000530041 USP48Q86UV5 1035 aa7.93□□□□□ -1.14
USP47-209ENST00000530041 SLITRK4Q8IW52 837 aa7.93□□□□□ -1.14
USP47-209ENST00000530041 NKD1Q969G9 470 aa7.93□□□□□ -1.14
USP47-209ENST00000530041 EAF1Q96JC9 268 aaPredicted RBP7.93□□□□□ -1.14
USP47-209ENST00000530041 ASPNQ9BXN1 380 aa7.93□□□□□ -1.14
USP47-209ENST00000530041 CTNND2Q9UQB3 1225 aa7.93□□□□□ -1.14
USP47-209ENST00000530041 ZNF165P49910 485 aa7.92□□□□□ -1.14
USP47-209ENST00000530041 CLCQ05315 142 aa7.92□□□□□ -1.14
USP47-209ENST00000530041 ARSHQ5FYA8 562 aa7.92□□□□□ -1.14
USP47-209ENST00000530041 RNF34Q969K3 372 aa7.92□□□□□ -1.14
USP47-209ENST00000530041 GPATCH2Q9NW75 528 aa7.92□□□□□ -1.14
USP47-209ENST00000530041 CARMIL2Q6F5E8 1435 aa7.92□□□□□ -1.14
USP47-209ENST00000530041 KRTAP9-6A0A140TA67 174 aa7.91□□□□□ -1.14
USP47-209ENST00000530041 LRRN2O75325 713 aa7.91□□□□□ -1.14
USP47-209ENST00000530041 RECKO95980 971 aa7.91□□□□□ -1.14
USP47-209ENST00000530041 ESR1P03372 595 aa7.91□□□□□ -1.14
USP47-209ENST00000530041 RAG1P15918 1043 aa7.91□□□□□ -1.14
USP47-209ENST00000530041 TPP2P29144 1249 aaPredicted RBP7.91□□□□□ -1.14
USP47-209ENST00000530041 MCM4P33991 863 aa7.91□□□□□ -1.14
USP47-209ENST00000530041 GAB4Q2WGN9 574 aa7.91□□□□□ -1.14
USP47-209ENST00000530041 CDCP2Q5VXM1 449 aa7.91□□□□□ -1.14
USP47-209ENST00000530041 OVOS1Q6IE37 1185 aa7.91□□□□□ -1.14
USP47-209ENST00000530041 GK5Q6ZS86 529 aa7.91□□□□□ -1.14
USP47-209ENST00000530041 FAM168AQ92567 244 aa7.91□□□□□ -1.14
USP47-209ENST00000530041 VWCEQ96DN2 955 aa7.91□□□□□ -1.14
USP47-209ENST00000530041 WASH4PA8MWX3 477 aa7.9□□□□□ -1.14
USP47-209ENST00000530041 UBOX5O94941 541 aa7.9□□□□□ -1.14
USP47-209ENST00000530041 CHMP4BP1P59074 171 aa7.9□□□□□ -1.14
USP47-209ENST00000530041 ZNF394Q53GI3 561 aa7.9□□□□□ -1.14
USP47-209ENST00000530041 TSPYL5Q86VY4 417 aaPredicted RBP7.9□□□□□ -1.14
USP47-209ENST00000530041 CCDC120Q96HB5 630 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms