RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 CFHR5Q9BXR6 569 aa6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 AS3MTQ9HBK9 375 aa6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 ZNF287Q9HBT7 754 aa6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 ZCCHC17Q9NP64 241 aaKnown RBP6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 CABP5Q9NP86 173 aa6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 SAGE1Q9NXZ1 904 aa6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 U3KPZ7 1027 aaPredicted RBP6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 COL11A1P12107 1806 aaPredicted RBP6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 NEDD4P46934 1319 aa6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 MGAMO43451 1857 aa6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 ZSWIM8A7E2V4 1837 aa6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 CASP8AP2Q9UKL3 1982 aa6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 USP17L10C9JJH3 530 aa6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 CYP21A2P08686 494 aa6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 NT5C2P49902 561 aa6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 BACE1P56817 501 aa6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 ICA1Q05084 483 aa6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 SPP2Q13103 211 aa6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 MTMR2Q13614 643 aa6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 RAB3GAP1Q15042 981 aa6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 IMMTQ16891 758 aaKnown RBP6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 AKNAD1Q5T1N1 836 aa6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 GPAT2Q6NUI2 795 aa6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 CASC1Q6TDU7 716 aa6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 ANKRD23Q86SG2 305 aa6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 IFNL1Q8IU54 200 aa6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 CLEC10AQ8IUN9 316 aa6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 SIAH1Q8IUQ4 282 aa6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 STK11IPQ8N1F8 1099 aa6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 NEDD1Q8NHV4 660 aa6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 ACER1Q8TDN7 264 aa6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 STAG1Q8WVM7 1258 aa6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 C12orf42Q96LP6 360 aa6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 KIAA1683Q9H0B3 1180 aa6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 MKNK2Q9HBH9 465 aa6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 ANO2Q9NQ90 1003 aa6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 CTNNA3Q9UI47 895 aa6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 RBM8AQ9Y5S9 174 aaKnown RBP6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 HTTP42858 3142 aa6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 ADGRA2Q96PE1 1338 aa6.72□□□□□ -1.33
RPUSD4-204ENST00000530036 A0A1W2PRG0 241 aa6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 C19orf81C9J6K1 198 aa6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 BTBD19C9JJ37 291 aa6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 MPHOSPH10O00566 681 aaKnown RBP6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 ZNF213O14771 459 aa6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 CA12O43570 354 aa6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 ALDH1A1P00352 501 aa6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 NOVP48745 357 aa6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 USP14P54578 494 aa6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 HMGCS2P54868 508 aa6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 DGKZQ13574 1117 aa6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 NECTIN1Q15223 517 aa6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 NOM1Q5C9Z4 860 aaKnown RBP6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 MFSD6Q6ZSS7 791 aa6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 KIAA1211Q6ZU35 1233 aa6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 FASTKD5Q7L8L6 764 aaKnown RBP6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 FAM43AQ8N2R8 423 aa6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 NKX2-3Q8TAU0 364 aa6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 RNF41Q9H4P4 317 aaPredicted RBP6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 SH2D4AQ9H788 454 aa6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 KANSL2Q9H9L4 492 aa6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 INCENPQ9NQS7 918 aa6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 RNF186Q9NXI6 227 aa6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 MTMR4Q9NYA4 1195 aa6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 NYAP2Q9P242 653 aa6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 AGTPBP1Q9UPW5 1226 aa6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 SLC45A1Q9Y2W3 748 aa6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 TMX2Q9Y320 296 aa6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 TAF6LQ9Y6J9 622 aa6.71□□□□□ -1.34
RPUSD4-204ENST00000530036 TSPY2A6NKD2 308 aa6.7□□□□□ -1.34
RPUSD4-204ENST00000530036 B4E1Z4 1266 aa6.7□□□□□ -1.34
RPUSD4-204ENST00000530036 EPB41L2O43491 1005 aaKnown RBP6.7□□□□□ -1.34
RPUSD4-204ENST00000530036 RANBP6O60518 1105 aaKnown RBP6.7□□□□□ -1.34
RPUSD4-204ENST00000530036 TRPA1O75762 1119 aa6.7□□□□□ -1.34
RPUSD4-204ENST00000530036 TSPY3P0CV98 308 aa6.7□□□□□ -1.34
RPUSD4-204ENST00000530036 TSPY8P0CW00 308 aa6.7□□□□□ -1.34
RPUSD4-204ENST00000530036 HSPA8P11142 646 aaKnown RBP6.7□□□□□ -1.34
RPUSD4-204ENST00000530036 EEF2P13639 858 aaKnown RBP6.7□□□□□ -1.34
RPUSD4-204ENST00000530036 HOXA7P31268 230 aaPredicted RBP6.7□□□□□ -1.34
RPUSD4-204ENST00000530036 TFAP4Q01664 338 aa6.7□□□□□ -1.34
RPUSD4-204ENST00000530036 FAM47AQ5JRC9 791 aa6.7□□□□□ -1.34
RPUSD4-204ENST00000530036 TREML2Q5T2D2 321 aa6.7□□□□□ -1.34
RPUSD4-204ENST00000530036 OTUD7BQ6GQQ9 843 aa6.7□□□□□ -1.34
RPUSD4-204ENST00000530036 USP17L2Q6R6M4 530 aa6.7□□□□□ -1.34
RPUSD4-204ENST00000530036 GADL1Q6ZQY3 521 aa6.7□□□□□ -1.34
RPUSD4-204ENST00000530036 STOX1Q6ZVD7 989 aa6.7□□□□□ -1.34
RPUSD4-204ENST00000530036 ZNF444Q8N0Y2 327 aaPredicted RBP6.7□□□□□ -1.34
RPUSD4-204ENST00000530036 MKL1Q969V6 931 aa6.7□□□□□ -1.34
RPUSD4-204ENST00000530036 CEP95Q96GE4 821 aa6.7□□□□□ -1.34
RPUSD4-204ENST00000530036 BEGAINQ9BUH8 593 aa6.7□□□□□ -1.34
RPUSD4-204ENST00000530036 VCPKMTQ9H867 229 aa6.7□□□□□ -1.34
RPUSD4-204ENST00000530036 CNNM2Q9H8M5 875 aa6.7□□□□□ -1.34
RPUSD4-204ENST00000530036 ARHGEF10LQ9HCE6 1279 aa6.7□□□□□ -1.34
RPUSD4-204ENST00000530036 IL17RBQ9NRM6 502 aa6.7□□□□□ -1.34
RPUSD4-204ENST00000530036 EMILIN3Q9NT22 766 aa6.7□□□□□ -1.34
RPUSD4-204ENST00000530036 TCP11L1Q9NUJ3 509 aa6.7□□□□□ -1.34
RPUSD4-204ENST00000530036 SYNPO2Q9UMS6 1093 aa6.7□□□□□ -1.34
RPUSD4-204ENST00000530036 MYH6P13533 1939 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms