RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 GPRC5AQ8NFJ5 357 aa4.37□□□□□ -1.71
PTPRC-213ENST00000529828 SH3RF3Q8TEJ3 882 aaPredicted RBP4.37□□□□□ -1.71
PTPRC-213ENST00000529828 SOCS4Q8WXH5 440 aa4.37□□□□□ -1.71
PTPRC-213ENST00000529828 OSBPL5Q9H0X9 879 aaPredicted RBP4.37□□□□□ -1.71
PTPRC-213ENST00000529828 PRDM6Q9NQX0 595 aa4.37□□□□□ -1.71
PTPRC-213ENST00000529828 TMOD4Q9NZQ9 345 aa4.37□□□□□ -1.71
PTPRC-213ENST00000529828 FLRT1Q9NZU1 646 aa4.37□□□□□ -1.71
PTPRC-213ENST00000529828 ATP11BQ9Y2G3 1177 aa4.37□□□□□ -1.71
PTPRC-213ENST00000529828 CHD9Q3L8U1 2897 aa4.37□□□□□ -1.71
PTPRC-213ENST00000529828 COL2A1P02458 1487 aaPredicted RBP4.37□□□□□ -1.71
PTPRC-213ENST00000529828 SEMA3EO15041 775 aa4.37□□□□□ -1.71
PTPRC-213ENST00000529828 TBC1D12O60347 775 aa4.37□□□□□ -1.71
PTPRC-213ENST00000529828 UBTFL1P0CB47 393 aaPredicted RBP4.37□□□□□ -1.71
PTPRC-213ENST00000529828 RGS2P41220 211 aa4.37□□□□□ -1.71
PTPRC-213ENST00000529828 RTP1P59025 263 aa4.37□□□□□ -1.71
PTPRC-213ENST00000529828 ERVK-9P63128 1117 aa4.37□□□□□ -1.71
PTPRC-213ENST00000529828 ERVK-24P63145 666 aa4.37□□□□□ -1.71
PTPRC-213ENST00000529828 SHHQ15465 462 aa4.37□□□□□ -1.71
PTPRC-213ENST00000529828 GJC2Q5T442 439 aaPredicted RBP4.37□□□□□ -1.71
PTPRC-213ENST00000529828 POTEEQ6S8J3 1075 aa4.37□□□□□ -1.71
PTPRC-213ENST00000529828 MAPKAPK5Q8IW41 473 aa4.37□□□□□ -1.71
PTPRC-213ENST00000529828 FAM9BQ8IZU0 186 aa4.37□□□□□ -1.71
PTPRC-213ENST00000529828 ZGPATQ8N5A5 531 aaKnown RBP4.37□□□□□ -1.71
PTPRC-213ENST00000529828 SSH1Q8WYL5 1049 aa4.37□□□□□ -1.71
PTPRC-213ENST00000529828 APBA2Q99767 749 aa4.37□□□□□ -1.71
PTPRC-213ENST00000529828 TTYH1Q9H313 450 aaPredicted RBP4.37□□□□□ -1.71
PTPRC-213ENST00000529828 DNAJC18Q9H819 358 aa4.37□□□□□ -1.71
PTPRC-213ENST00000529828 AS3MTQ9HBK9 375 aa4.37□□□□□ -1.71
PTPRC-213ENST00000529828 RAI14Q9P0K7 980 aa4.37□□□□□ -1.71
PTPRC-213ENST00000529828 RBPJLQ9UBG7 517 aa4.37□□□□□ -1.71
PTPRC-213ENST00000529828 PRKAG2Q9UGJ0 569 aa4.37□□□□□ -1.71
PTPRC-213ENST00000529828 SAP30BPQ9UHR5 308 aaKnown RBP4.37□□□□□ -1.71
PTPRC-213ENST00000529828 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.37□□□□□ -1.71
PTPRC-213ENST00000529828 GPR75-ASB3A0A0A6YYF3 556 aa4.36□□□□□ -1.71
PTPRC-213ENST00000529828 A0A1B0GUL7 405 aa4.36□□□□□ -1.71
PTPRC-213ENST00000529828 CIAO1O76071 339 aa4.36□□□□□ -1.71
PTPRC-213ENST00000529828 FOSL2P15408 326 aa4.36□□□□□ -1.71
PTPRC-213ENST00000529828 MAPK4P31152 587 aa4.36□□□□□ -1.71
PTPRC-213ENST00000529828 CYP2C19P33261 490 aa4.36□□□□□ -1.71
PTPRC-213ENST00000529828 IL15P40933 162 aaPredicted RBP4.36□□□□□ -1.71
PTPRC-213ENST00000529828 BACE1P56817 501 aa4.36□□□□□ -1.71
PTPRC-213ENST00000529828 TFCP2Q12800 502 aa4.36□□□□□ -1.71
PTPRC-213ENST00000529828 SH3D19Q5HYK7 790 aa4.36□□□□□ -1.71
PTPRC-213ENST00000529828 MORN1Q5T089 497 aa4.36□□□□□ -1.71
PTPRC-213ENST00000529828 FAM109BQ6ICB4 259 aaPredicted RBP4.36□□□□□ -1.71
PTPRC-213ENST00000529828 ADGRD1Q6QNK2 874 aa4.36□□□□□ -1.71
PTPRC-213ENST00000529828 TMEM92Q6UXU6 159 aa4.36□□□□□ -1.71
PTPRC-213ENST00000529828 PLEKHH3Q7Z736 793 aa4.36□□□□□ -1.71
PTPRC-213ENST00000529828 SLF2Q8IX21 1173 aa4.36□□□□□ -1.71
PTPRC-213ENST00000529828 USP38Q8NB14 1042 aa4.36□□□□□ -1.71
PTPRC-213ENST00000529828 USP6NLQ92738 828 aa4.36□□□□□ -1.71
PTPRC-213ENST00000529828 NSUN4Q96CB9 384 aaKnown RBP4.36□□□□□ -1.71
PTPRC-213ENST00000529828 XAGE2Q96GT9 111 aa4.36□□□□□ -1.71
PTPRC-213ENST00000529828 NEUROD6Q96NK8 337 aa4.36□□□□□ -1.71
PTPRC-213ENST00000529828 SEMA6BQ9H3T3 888 aa4.36□□□□□ -1.71
PTPRC-213ENST00000529828 HMG20BQ9P0W2 317 aa4.36□□□□□ -1.71
PTPRC-213ENST00000529828 REV3LO60673 3130 aa4.36□□□□□ -1.71
PTPRC-213ENST00000529828 CHD7Q9P2D1 2997 aa4.36□□□□□ -1.71
PTPRC-213ENST00000529828 ATAD5Q96QE3 1844 aa4.36□□□□□ -1.71
PTPRC-213ENST00000529828 CNMDO75829 334 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 XRCC5P13010 732 aaKnown RBP4.35□□□□□ -1.71
PTPRC-213ENST00000529828 MAP2K5Q13163 448 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 TRIM60Q495X7 471 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 SPTY2D1Q68D10 685 aaPredicted RBP4.35□□□□□ -1.71
PTPRC-213ENST00000529828 TRPV1Q8NER1 839 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 TGFBRAP1Q8WUH2 860 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 BADQ92934 168 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 TRIM34Q9BYJ4 488 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 SNRKQ9NRH2 765 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 EMILIN3Q9NT22 766 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 AATFQ9NY61 560 aaKnown RBP eCLIP4.35□□□□□ -1.71
PTPRC-213ENST00000529828 DDX20Q9UHI6 824 aaKnown RBP4.35□□□□□ -1.71
PTPRC-213ENST00000529828 ZBTB21Q9ULJ3 1066 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 PTPRCP08575 1304 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 MAST2Q6P0Q8 1798 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 USP17L10C9JJH3 530 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 ARHGAP33O14559 1287 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 COL9A1P20849 921 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 HOXA7P31268 230 aaPredicted RBP4.35□□□□□ -1.71
PTPRC-213ENST00000529828 GORABQ5T7V8 394 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 MFSD14CQ5VZR4 134 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 SH3RF1Q7Z6J0 888 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 ADGRA1Q86SQ6 560 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 HOMEZQ8IX15 550 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 TRMT44Q8IYL2 757 aaKnown RBP4.35□□□□□ -1.71
PTPRC-213ENST00000529828 CRACR2BQ8N4Y2 399 aaPredicted RBP4.35□□□□□ -1.71
PTPRC-213ENST00000529828 SPATA5Q8NB90 893 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 NPLOC4Q8TAT6 608 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 PPM1EQ8WY54 764 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 FERMT2Q96AC1 680 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 EDC3Q96F86 508 aaKnown RBP4.35□□□□□ -1.71
PTPRC-213ENST00000529828 MEIS3Q99687 375 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 FEZ1Q99689 392 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 WDR18Q9BV38 432 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 SMC4Q9NTJ3 1288 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 PALD1Q9ULE6 856 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 SIPA1L1O43166 1804 aa4.35□□□□□ -1.71
PTPRC-213ENST00000529828 RBAK-RBAKDNI3L0D1 243 aa4.34□□□□□ -1.71
PTPRC-213ENST00000529828 DNM1LO00429 736 aa4.34□□□□□ -1.71
PTPRC-213ENST00000529828 GH2P01242 217 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms