RNA–Protein interactions for RNA: ENST00000529724.1

PPP1CA-206, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2

Gene PPP1CA, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-206ENST00000529724 SLC44A5Q8NCS7 719 aa13.14□□□□□ -0.31
PPP1CA-206ENST00000529724 HERVK_113Q902F9 699 aa13.14□□□□□ -0.31
PPP1CA-206ENST00000529724 RABGAP1Q9Y3P9 1069 aa13.14□□□□□ -0.31
PPP1CA-206ENST00000529724 NPM3O75607 178 aaKnown RBP13.13□□□□□ -0.31
PPP1CA-206ENST00000529724 TIMP1P01033 207 aa13.13□□□□□ -0.31
PPP1CA-206ENST00000529724 BTDP43251 543 aa13.13□□□□□ -0.31
PPP1CA-206ENST00000529724 RABL6Q3YEC7 729 aaPredicted RBP13.13□□□□□ -0.31
PPP1CA-206ENST00000529724 OLFML2BQ68BL8 750 aa13.13□□□□□ -0.31
PPP1CA-206ENST00000529724 KLHDC4Q8TBB5 520 aa13.13□□□□□ -0.31
PPP1CA-206ENST00000529724 FAM163AQ96GL9 167 aaPredicted RBP13.13□□□□□ -0.31
PPP1CA-206ENST00000529724 C9orf78Q9NZ63 289 aaPredicted RBP13.13□□□□□ -0.31
PPP1CA-206ENST00000529724 MSRAQ9UJ68 235 aa13.13□□□□□ -0.31
PPP1CA-206ENST00000529724 TBX21Q9UL17 535 aa13.13□□□□□ -0.31
PPP1CA-206ENST00000529724 GBF1Q92538 1859 aa13.12□□□□□ -0.31
PPP1CA-206ENST00000529724 C19orf81C9J6K1 198 aa13.12□□□□□ -0.31
PPP1CA-206ENST00000529724 CCNA1P78396 465 aa13.12□□□□□ -0.31
PPP1CA-206ENST00000529724 SKIV2LQ15477 1246 aaKnown RBP13.12□□□□□ -0.31
PPP1CA-206ENST00000529724 SHROOM1Q2M3G4 852 aaPredicted RBP13.12□□□□□ -0.31
PPP1CA-206ENST00000529724 WDR78Q5VTH9 848 aa13.12□□□□□ -0.31
PPP1CA-206ENST00000529724 MFSD5Q6N075 450 aa13.12□□□□□ -0.31
PPP1CA-206ENST00000529724 ZNF365Q70YC5 407 aa13.12□□□□□ -0.31
PPP1CA-206ENST00000529724 ANKRD33Q7Z3H0 272 aa13.12□□□□□ -0.31
PPP1CA-206ENST00000529724 ANKRD44Q8N8A2 993 aa13.12□□□□□ -0.31
PPP1CA-206ENST00000529724 CCER1Q8TC90 406 aaPredicted RBP13.12□□□□□ -0.31
PPP1CA-206ENST00000529724 FBXL18Q96ME1 805 aa13.12□□□□□ -0.31
PPP1CA-206ENST00000529724 TOX2Q96NM4 488 aa13.12□□□□□ -0.31
PPP1CA-206ENST00000529724 SLC28A3Q9HAS3 691 aa13.12□□□□□ -0.31
PPP1CA-206ENST00000529724 EMILIN3Q9NT22 766 aa13.12□□□□□ -0.31
PPP1CA-206ENST00000529724 ZNF318Q5VUA4 2279 aa13.12□□□□□ -0.31
PPP1CA-206ENST00000529724 CFAP54Q96N23 3096 aa13.12□□□□□ -0.31
PPP1CA-206ENST00000529724 CACNA1FO60840 1977 aa13.11□□□□□ -0.31
PPP1CA-206ENST00000529724 A0A1W2PQ45 241 aaPredicted RBP13.11□□□□□ -0.31
PPP1CA-206ENST00000529724 A0A1W2PQY0 241 aa13.11□□□□□ -0.31
PPP1CA-206ENST00000529724 USP17L10C9JJH3 530 aa13.11□□□□□ -0.31
PPP1CA-206ENST00000529724 SLC5A1P13866 664 aa13.11□□□□□ -0.31
PPP1CA-206ENST00000529724 PPIGQ13427 754 aaKnown RBP eCLIP13.11□□□□□ -0.31
PPP1CA-206ENST00000529724 RALBP1Q15311 655 aa13.11□□□□□ -0.31
PPP1CA-206ENST00000529724 PRAMEF19Q5SWL8 479 aa13.11□□□□□ -0.31
PPP1CA-206ENST00000529724 LPIN2Q92539 896 aa13.11□□□□□ -0.31
PPP1CA-206ENST00000529724 BICC1Q9H694 974 aaKnown RBP13.11□□□□□ -0.31
PPP1CA-206ENST00000529724 BTBD7Q9P203 1132 aa13.11□□□□□ -0.31
PPP1CA-206ENST00000529724 COG5Q9UP83 839 aa13.11□□□□□ -0.31
PPP1CA-206ENST00000529724 USP34Q70CQ2 3546 aa13.11□□□□□ -0.31
PPP1CA-206ENST00000529724 SPTBN4Q9H254 2564 aa13.11□□□□□ -0.31
PPP1CA-206ENST00000529724 SIPA1L1O43166 1804 aa13.11□□□□□ -0.31
PPP1CA-206ENST00000529724 ZNF236Q9UL36 1845 aa13.11□□□□□ -0.31
PPP1CA-206ENST00000529724 NBPF7P0C2Y1 421 aaPredicted RBP13.1□□□□□ -0.31
PPP1CA-206ENST00000529724 ACRP10323 421 aa13.1□□□□□ -0.31
PPP1CA-206ENST00000529724 CSF2RAP15509 400 aa13.1□□□□□ -0.31
PPP1CA-206ENST00000529724 POU3F3P20264 500 aaPredicted RBP13.1□□□□□ -0.31
PPP1CA-206ENST00000529724 ZNF384Q8TF68 577 aa13.1□□□□□ -0.31
PPP1CA-206ENST00000529724 MTCH2Q9Y6C9 303 aa13.1□□□□□ -0.31
PPP1CA-206ENST00000529724 IVNS1ABPQ9Y6Y0 642 aa13.1□□□□□ -0.31
PPP1CA-206ENST00000529724 MROH7-TTC4A0A0A0MT08 1334 aa13.1□□□□□ -0.31
PPP1CA-206ENST00000529724 SMCHD1A6NHR9 2005 aa13.1□□□□□ -0.31
PPP1CA-206ENST00000529724 GPR75-ASB3A0A0A6YYF3 556 aa13.09□□□□□ -0.31
PPP1CA-206ENST00000529724 ALDH1L1O75891 902 aa13.09□□□□□ -0.31
PPP1CA-206ENST00000529724 ASNSP08243 561 aa13.09□□□□□ -0.31
PPP1CA-206ENST00000529724 NCBP3Q53F19 620 aaKnown RBP13.09□□□□□ -0.31
PPP1CA-206ENST00000529724 PSRC1Q6PGN9 363 aaPredicted RBP13.09□□□□□ -0.31
PPP1CA-206ENST00000529724 CCDC174Q6PII3 467 aa13.09□□□□□ -0.31
PPP1CA-206ENST00000529724 DNAJC18Q9H819 358 aa13.09□□□□□ -0.31
PPP1CA-206ENST00000529724 XPNPEP3Q9NQH7 507 aa13.09□□□□□ -0.31
PPP1CA-206ENST00000529724 HERC5Q9UII4 1024 aaKnown RBP13.09□□□□□ -0.31
PPP1CA-206ENST00000529724 DCDC2CA8MYV0 355 aa13.08□□□□□ -0.32
PPP1CA-206ENST00000529724 COBLO75128 1261 aa13.08□□□□□ -0.32
PPP1CA-206ENST00000529724 PGK1P00558 417 aa13.08□□□□□ -0.32
PPP1CA-206ENST00000529724 ADORA2AP29274 412 aa13.08□□□□□ -0.32
PPP1CA-206ENST00000529724 PHKA1P46020 1223 aa13.08□□□□□ -0.32
PPP1CA-206ENST00000529724 DPP9Q86TI2 863 aa13.08□□□□□ -0.32
PPP1CA-206ENST00000529724 DZIP1Q86YF9 867 aaKnown RBP13.08□□□□□ -0.32
PPP1CA-206ENST00000529724 KCNH6Q9H252 994 aa13.08□□□□□ -0.32
PPP1CA-206ENST00000529724 DENND2AQ9ULE3 1009 aa13.08□□□□□ -0.32
PPP1CA-206ENST00000529724 ZNF521Q96K83 1311 aa13.08□□□□□ -0.32
PPP1CA-206ENST00000529724 RFXAPO00287 272 aa13.07□□□□□ -0.32
PPP1CA-206ENST00000529724 SEMA3EO15041 775 aa13.07□□□□□ -0.32
PPP1CA-206ENST00000529724 ZBTB22O15209 634 aa13.07□□□□□ -0.32
PPP1CA-206ENST00000529724 MYOGP15173 224 aa13.07□□□□□ -0.32
PPP1CA-206ENST00000529724 RABGGTBP53611 331 aa13.07□□□□□ -0.32
PPP1CA-206ENST00000529724 PPP2R2DQ66LE6 453 aa13.07□□□□□ -0.32
PPP1CA-206ENST00000529724 KRT40Q6A162 431 aa13.07□□□□□ -0.32
PPP1CA-206ENST00000529724 LBX2Q6XYB7 198 aa13.07□□□□□ -0.32
PPP1CA-206ENST00000529724 RNF180Q86T96 592 aa13.07□□□□□ -0.32
PPP1CA-206ENST00000529724 C12orf42Q96LP6 360 aa13.07□□□□□ -0.32
PPP1CA-206ENST00000529724 UIMC1Q96RL1 719 aa13.07□□□□□ -0.32
PPP1CA-206ENST00000529724 PHOX2BQ99453 314 aa13.07□□□□□ -0.32
PPP1CA-206ENST00000529724 ZBTB21Q9ULJ3 1066 aa13.07□□□□□ -0.32
PPP1CA-206ENST00000529724 USP17L15C9J2P7 530 aa13.06□□□□□ -0.32
PPP1CA-206ENST00000529724 USP17L13C9JLJ4 530 aa13.06□□□□□ -0.32
PPP1CA-206ENST00000529724 USP17L11C9JVI0 530 aa13.06□□□□□ -0.32
PPP1CA-206ENST00000529724 USP17L18D6R9N7 530 aa13.06□□□□□ -0.32
PPP1CA-206ENST00000529724 USP17L22D6RA61 530 aa13.06□□□□□ -0.32
PPP1CA-206ENST00000529724 USP17L17D6RBQ6 530 aa13.06□□□□□ -0.32
PPP1CA-206ENST00000529724 USP17L19D6RCP7 530 aa13.06□□□□□ -0.32
PPP1CA-206ENST00000529724 USP17L20D6RJB6 530 aa13.06□□□□□ -0.32
PPP1CA-206ENST00000529724 EYA2O00167 538 aa13.06□□□□□ -0.32
PPP1CA-206ENST00000529724 GDF11O95390 407 aa13.06□□□□□ -0.32
PPP1CA-206ENST00000529724 RARBP10826 455 aa13.06□□□□□ -0.32
PPP1CA-206ENST00000529724 USP17L24Q0WX57 530 aa13.06□□□□□ -0.32
PPP1CA-206ENST00000529724 USP17L2Q6R6M4 530 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms