RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 NPLOC4Q8TAT6 608 aa14.38□□□□□ -0.11
AMBRA1-207ENST00000529553 GAS2L1Q99501 681 aaPredicted RBP14.38□□□□□ -0.11
AMBRA1-207ENST00000529553 C1QTNF1Q9BXJ1 281 aa14.38□□□□□ -0.11
AMBRA1-207ENST00000529553 HDAC5Q9UQL6 1122 aa14.38□□□□□ -0.11
AMBRA1-207ENST00000529553 AKAP2Q9Y2D5 859 aa14.38□□□□□ -0.11
AMBRA1-207ENST00000529553 MYH2Q9UKX2 1941 aa14.38□□□□□ -0.11
AMBRA1-207ENST00000529553 KIAA0355O15063 1070 aa14.37□□□□□ -0.11
AMBRA1-207ENST00000529553 ADCYAP1R1P41586 468 aa14.37□□□□□ -0.11
AMBRA1-207ENST00000529553 CATSPERGQ6ZRH7 1159 aa14.37□□□□□ -0.11
AMBRA1-207ENST00000529553 ADAMTS19Q8TE59 1207 aa14.37□□□□□ -0.11
AMBRA1-207ENST00000529553 TRIM34Q9BYJ4 488 aa14.37□□□□□ -0.11
AMBRA1-207ENST00000529553 COPRSQ9NQ92 184 aa14.37□□□□□ -0.11
AMBRA1-207ENST00000529553 THEGQ9P2T0 379 aa14.37□□□□□ -0.11
AMBRA1-207ENST00000529553 ZBTB21Q9ULJ3 1066 aa14.37□□□□□ -0.11
AMBRA1-207ENST00000529553 SYNGAP1Q96PV0 1343 aa14.37□□□□□ -0.11
AMBRA1-207ENST00000529553 MYH13Q9UKX3 1938 aa14.37□□□□□ -0.11
AMBRA1-207ENST00000529553 LTBP2Q14767 1821 aa14.36□□□□□ -0.11
AMBRA1-207ENST00000529553 BAG3O95817 575 aa14.36□□□□□ -0.11
AMBRA1-207ENST00000529553 CLTBP09497 229 aa14.36□□□□□ -0.11
AMBRA1-207ENST00000529553 PLCG2P16885 1265 aa14.36□□□□□ -0.11
AMBRA1-207ENST00000529553 USP14P54578 494 aa14.36□□□□□ -0.11
AMBRA1-207ENST00000529553 EPHB4P54760 987 aa14.36□□□□□ -0.11
AMBRA1-207ENST00000529553 LRRC41Q15345 812 aa14.36□□□□□ -0.11
AMBRA1-207ENST00000529553 WDR78Q5VTH9 848 aa14.36□□□□□ -0.11
AMBRA1-207ENST00000529553 DPP9Q86TI2 863 aa14.36□□□□□ -0.11
AMBRA1-207ENST00000529553 TIFAQ96CG3 184 aa14.36□□□□□ -0.11
AMBRA1-207ENST00000529553 XAGE2Q96GT9 111 aa14.36□□□□□ -0.11
AMBRA1-207ENST00000529553 UHRF1Q96T88 793 aaPredicted RBP14.36□□□□□ -0.11
AMBRA1-207ENST00000529553 NOL10Q9BSC4 688 aaKnown RBP14.36□□□□□ -0.11
AMBRA1-207ENST00000529553 SLC5A4Q9NY91 659 aa14.36□□□□□ -0.11
AMBRA1-207ENST00000529553 SALL2Q9Y467 1007 aaPredicted RBP14.36□□□□□ -0.11
AMBRA1-207ENST00000529553 NDUFB9Q9Y6M9 179 aa14.36□□□□□ -0.11
AMBRA1-207ENST00000529553 RAG1P15918 1043 aa14.35□□□□□ -0.11
AMBRA1-207ENST00000529553 ITGB8P26012 769 aa14.35□□□□□ -0.11
AMBRA1-207ENST00000529553 PPP4CP60510 307 aa14.35□□□□□ -0.11
AMBRA1-207ENST00000529553 FPGSQ05932 587 aa14.35□□□□□ -0.11
AMBRA1-207ENST00000529553 CCDC184Q52MB2 194 aa14.35□□□□□ -0.11
AMBRA1-207ENST00000529553 ATF7IPQ6VMQ6 1270 aa14.35□□□□□ -0.11
AMBRA1-207ENST00000529553 CRACR2BQ8N4Y2 399 aaPredicted RBP14.35□□□□□ -0.11
AMBRA1-207ENST00000529553 SPATA5Q8NB90 893 aa14.35□□□□□ -0.11
AMBRA1-207ENST00000529553 SH3RF3Q8TEJ3 882 aaPredicted RBP14.35□□□□□ -0.11
AMBRA1-207ENST00000529553 DNAJC18Q9H819 358 aa14.35□□□□□ -0.11
AMBRA1-207ENST00000529553 RAI14Q9P0K7 980 aa14.35□□□□□ -0.11
AMBRA1-207ENST00000529553 HMG20BQ9P0W2 317 aa14.35□□□□□ -0.11
AMBRA1-207ENST00000529553 PHF24Q9UPV7 400 aa14.35□□□□□ -0.11
AMBRA1-207ENST00000529553 A0A1B0GUL7 405 aa14.34□□□□□ -0.11
AMBRA1-207ENST00000529553 IGSF3O75054 1194 aa14.34□□□□□ -0.11
AMBRA1-207ENST00000529553 UBTFL1P0CB47 393 aaPredicted RBP14.34□□□□□ -0.11
AMBRA1-207ENST00000529553 IL27Q8NEV9 243 aa14.34□□□□□ -0.11
AMBRA1-207ENST00000529553 TOX2Q96NM4 488 aa14.34□□□□□ -0.11
AMBRA1-207ENST00000529553 BTBD7Q9P203 1132 aa14.34□□□□□ -0.11
AMBRA1-207ENST00000529553 NRBP1Q9UHY1 535 aa14.34□□□□□ -0.11
AMBRA1-207ENST00000529553 GDF11O95390 407 aa14.33□□□□□ -0.12
AMBRA1-207ENST00000529553 CCDC174Q6PII3 467 aa14.33□□□□□ -0.12
AMBRA1-207ENST00000529553 SHCBP1Q8NEM2 672 aa14.33□□□□□ -0.12
AMBRA1-207ENST00000529553 FERMT2Q96AC1 680 aa14.33□□□□□ -0.12
AMBRA1-207ENST00000529553 KIAA1683Q9H0B3 1180 aa14.33□□□□□ -0.12
AMBRA1-207ENST00000529553 HOXC10Q9NYD6 342 aa14.33□□□□□ -0.12
AMBRA1-207ENST00000529553 HLA-DOAP06340 250 aa14.32□□□□□ -0.12
AMBRA1-207ENST00000529553 ADORA2AP29274 412 aa14.32□□□□□ -0.12
AMBRA1-207ENST00000529553 TBC1D9Q6ZT07 1266 aa14.32□□□□□ -0.12
AMBRA1-207ENST00000529553 ANKRD33Q7Z3H0 272 aa14.32□□□□□ -0.12
AMBRA1-207ENST00000529553 ABRAQ8N0Z2 381 aa14.32□□□□□ -0.12
AMBRA1-207ENST00000529553 PPM1EQ8WY54 764 aa14.32□□□□□ -0.12
AMBRA1-207ENST00000529553 TSPYL2Q9H2G4 693 aaPredicted RBP14.32□□□□□ -0.12
AMBRA1-207ENST00000529553 TMEM39AQ9NV64 488 aa14.32□□□□□ -0.12
AMBRA1-207ENST00000529553 LRP2BPQ9P2M1 347 aa14.32□□□□□ -0.12
AMBRA1-207ENST00000529553 PA2G4Q9UQ80 394 aaKnown RBP14.32□□□□□ -0.12
AMBRA1-207ENST00000529553 RLFQ13129 1914 aa14.32□□□□□ -0.12
AMBRA1-207ENST00000529553 BDP1A6H8Y1 2624 aa14.32□□□□□ -0.12
AMBRA1-207ENST00000529553 SPDYE16A6NNV3 312 aaPredicted RBP14.31□□□□□ -0.12
AMBRA1-207ENST00000529553 GH2P01242 217 aa14.31□□□□□ -0.12
AMBRA1-207ENST00000529553 MYCNP04198 464 aaPredicted RBP14.31□□□□□ -0.12
AMBRA1-207ENST00000529553 VCAM1P19320 739 aa14.31□□□□□ -0.12
AMBRA1-207ENST00000529553 ARID4AP29374 1257 aaPredicted RBP14.31□□□□□ -0.12
AMBRA1-207ENST00000529553 SHROOM1Q2M3G4 852 aaPredicted RBP14.31□□□□□ -0.12
AMBRA1-207ENST00000529553 ANO1Q5XXA6 986 aa14.31□□□□□ -0.12
AMBRA1-207ENST00000529553 TATDN1Q6P1N9 297 aa14.31□□□□□ -0.12
AMBRA1-207ENST00000529553 RNF180Q86T96 592 aa14.31□□□□□ -0.12
AMBRA1-207ENST00000529553 TGFBRAP1Q8WUH2 860 aa14.31□□□□□ -0.12
AMBRA1-207ENST00000529553 PALD1Q9ULE6 856 aa14.31□□□□□ -0.12
AMBRA1-207ENST00000529553 FLT1P17948 1338 aa14.31□□□□□ -0.12
AMBRA1-207ENST00000529553 FRMPD3Q5JV73 1810 aa14.3□□□□□ -0.12
AMBRA1-207ENST00000529553 DCDC2CA8MYV0 355 aa14.3□□□□□ -0.12
AMBRA1-207ENST00000529553 TIMP1P01033 207 aa14.3□□□□□ -0.12
AMBRA1-207ENST00000529553 RARBP10826 455 aa14.3□□□□□ -0.12
AMBRA1-207ENST00000529553 TFCP2Q12800 502 aa14.3□□□□□ -0.12
AMBRA1-207ENST00000529553 COG2Q14746 738 aa14.3□□□□□ -0.12
AMBRA1-207ENST00000529553 GORABQ5T7V8 394 aa14.3□□□□□ -0.12
AMBRA1-207ENST00000529553 RASIP1Q5U651 963 aa14.3□□□□□ -0.12
AMBRA1-207ENST00000529553 MAPKAPK5Q8IW41 473 aa14.3□□□□□ -0.12
AMBRA1-207ENST00000529553 FEZ1Q99689 392 aa14.3□□□□□ -0.12
AMBRA1-207ENST00000529553 TSEN34Q9BSV6 310 aaKnown RBP14.3□□□□□ -0.12
AMBRA1-207ENST00000529553 MOV10L1Q9BXT6 1211 aaKnown RBP14.3□□□□□ -0.12
AMBRA1-207ENST00000529553 MROH8Q9H579 483 aa14.3□□□□□ -0.12
AMBRA1-207ENST00000529553 XPNPEP3Q9NQH7 507 aa14.3□□□□□ -0.12
AMBRA1-207ENST00000529553 AATFQ9NY61 560 aaKnown RBP eCLIP14.3□□□□□ -0.12
AMBRA1-207ENST00000529553 CXXC1Q9P0U4 656 aaPredicted RBP14.3□□□□□ -0.12
AMBRA1-207ENST00000529553 ATAD5Q96QE3 1844 aa14.29□□□□□ -0.12
AMBRA1-207ENST00000529553 COBLO75128 1261 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms