RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 PRDM5Q9NQX1 630 aaPredicted RBP23.36■■□□□ 1.33
SSRP1-204ENST00000529002 RABGAP1Q9Y3P9 1069 aa23.36■■□□□ 1.33
SSRP1-204ENST00000529002 GH2P01242 217 aa23.35■■□□□ 1.33
SSRP1-204ENST00000529002 ATP2B2Q01814 1243 aa23.35■■□□□ 1.33
SSRP1-204ENST00000529002 BADQ92934 168 aa23.35■■□□□ 1.33
SSRP1-204ENST00000529002 BTBD7Q9P203 1132 aa23.35■■□□□ 1.33
SSRP1-204ENST00000529002 SLC15A5A6NIM6 579 aa23.34■■□□□ 1.33
SSRP1-204ENST00000529002 DNM1LO00429 736 aa23.34■■□□□ 1.33
SSRP1-204ENST00000529002 DYNLL1P63167 89 aaKnown RBP23.34■■□□□ 1.33
SSRP1-204ENST00000529002 SH3RF1Q7Z6J0 888 aa23.34■■□□□ 1.33
SSRP1-204ENST00000529002 GTF3C2Q8WUA4 911 aaPredicted RBP23.34■■□□□ 1.33
SSRP1-204ENST00000529002 MYO9BQ13459 2157 aa23.33■■□□□ 1.32
SSRP1-204ENST00000529002 ZNFX1Q9P2E3 1918 aaKnown RBP23.32■■□□□ 1.32
SSRP1-204ENST00000529002 USP17L15C9J2P7 530 aa23.32■■□□□ 1.32
SSRP1-204ENST00000529002 USP17L13C9JLJ4 530 aa23.32■■□□□ 1.32
SSRP1-204ENST00000529002 USP17L11C9JVI0 530 aa23.32■■□□□ 1.32
SSRP1-204ENST00000529002 USP17L18D6R9N7 530 aa23.32■■□□□ 1.32
SSRP1-204ENST00000529002 USP17L22D6RA61 530 aa23.32■■□□□ 1.32
SSRP1-204ENST00000529002 USP17L17D6RBQ6 530 aa23.32■■□□□ 1.32
SSRP1-204ENST00000529002 USP17L19D6RCP7 530 aa23.32■■□□□ 1.32
SSRP1-204ENST00000529002 USP17L20D6RJB6 530 aa23.32■■□□□ 1.32
SSRP1-204ENST00000529002 BAG3O95817 575 aa23.32■■□□□ 1.32
SSRP1-204ENST00000529002 MYCNP04198 464 aaPredicted RBP23.32■■□□□ 1.32
SSRP1-204ENST00000529002 PPP4CP60510 307 aa23.32■■□□□ 1.32
SSRP1-204ENST00000529002 CCNA1P78396 465 aa23.32■■□□□ 1.32
SSRP1-204ENST00000529002 USP17L24Q0WX57 530 aa23.32■■□□□ 1.32
SSRP1-204ENST00000529002 TRIM60Q495X7 471 aa23.32■■□□□ 1.32
SSRP1-204ENST00000529002 SLC39A5Q6ZMH5 540 aa23.32■■□□□ 1.32
SSRP1-204ENST00000529002 CATSPERGQ6ZRH7 1159 aa23.32■■□□□ 1.32
SSRP1-204ENST00000529002 ACER1Q8TDN7 264 aa23.32■■□□□ 1.32
SSRP1-204ENST00000529002 FEZ1Q99689 392 aa23.32■■□□□ 1.32
SSRP1-204ENST00000529002 GLRX3O76003 335 aaKnown RBP23.31■■□□□ 1.32
SSRP1-204ENST00000529002 CYBAP13498 195 aa23.31■■□□□ 1.32
SSRP1-204ENST00000529002 GRB14Q14449 540 aa23.31■■□□□ 1.32
SSRP1-204ENST00000529002 C12orf42Q96LP6 360 aa23.31■■□□□ 1.32
SSRP1-204ENST00000529002 HDAC5Q9UQL6 1122 aa23.31■■□□□ 1.32
SSRP1-204ENST00000529002 TRIM43BA6NCK2 446 aa23.3■■□□□ 1.32
SSRP1-204ENST00000529002 MSCO60682 206 aa23.3■■□□□ 1.32
SSRP1-204ENST00000529002 IGHA2P01877 340 aa23.3■■□□□ 1.32
SSRP1-204ENST00000529002 HOXC6P09630 235 aa23.3■■□□□ 1.32
SSRP1-204ENST00000529002 FOSL2P15408 326 aa23.3■■□□□ 1.32
SSRP1-204ENST00000529002 PLCG2P16885 1265 aa23.3■■□□□ 1.32
SSRP1-204ENST00000529002 FERMT2Q96AC1 680 aa23.3■■□□□ 1.32
SSRP1-204ENST00000529002 TRIM43Q96BQ3 446 aaPredicted RBP23.3■■□□□ 1.32
SSRP1-204ENST00000529002 API5Q9BZZ5 524 aaKnown RBP23.3■■□□□ 1.32
SSRP1-204ENST00000529002 PDLIM7Q9NR12 457 aa23.3■■□□□ 1.32
SSRP1-204ENST00000529002 GINM1Q9NU53 330 aa23.3■■□□□ 1.32
SSRP1-204ENST00000529002 IVNS1ABPQ9Y6Y0 642 aa23.3■■□□□ 1.32
SSRP1-204ENST00000529002 CYP2E1P05181 493 aaPredicted RBP23.29■■□□□ 1.32
SSRP1-204ENST00000529002 UQCRFS1P1P0C7P4 283 aa23.29■■□□□ 1.32
SSRP1-204ENST00000529002 VCAM1P19320 739 aa23.29■■□□□ 1.32
SSRP1-204ENST00000529002 MTX1Q13505 466 aa23.29■■□□□ 1.32
SSRP1-204ENST00000529002 RAB3GAP1Q15042 981 aa23.29■■□□□ 1.32
SSRP1-204ENST00000529002 PRAMEF19Q5SWL8 479 aa23.29■■□□□ 1.32
SSRP1-204ENST00000529002 PNMA6EA0A0J9YXQ4 647 aa23.28■■□□□ 1.32
SSRP1-204ENST00000529002 SPDYE16A6NNV3 312 aaPredicted RBP23.28■■□□□ 1.32
SSRP1-204ENST00000529002 HLA-DOAP06340 250 aa23.28■■□□□ 1.32
SSRP1-204ENST00000529002 ITGB8P26012 769 aa23.28■■□□□ 1.32
SSRP1-204ENST00000529002 PIH1D3Q9NQM4 214 aaKnown RBP23.28■■□□□ 1.32
SSRP1-204ENST00000529002 ADCYAP1R1P41586 468 aa23.27■■□□□ 1.32
SSRP1-204ENST00000529002 EPHB4P54760 987 aa23.27■■□□□ 1.32
SSRP1-204ENST00000529002 SMAD3P84022 425 aaKnown RBP23.27■■□□□ 1.32
SSRP1-204ENST00000529002 USP38Q8NB14 1042 aa23.27■■□□□ 1.32
SSRP1-204ENST00000529002 ARRDC4Q8NCT1 418 aa23.27■■□□□ 1.32
SSRP1-204ENST00000529002 DBNDD2Q9BQY9 259 aa23.27■■□□□ 1.32
SSRP1-204ENST00000529002 RAPGEFL1Q9UHV5 662 aa23.27■■□□□ 1.32
SSRP1-204ENST00000529002 KBTBD13C9JR72 458 aa23.26■■□□□ 1.31
SSRP1-204ENST00000529002 G3BP1Q13283 466 aaKnown RBP eCLIP23.26■■□□□ 1.319e-9■□□□□ 9.9
SSRP1-204ENST00000529002 TTC39AQ5SRH9 613 aa23.26■■□□□ 1.31
SSRP1-204ENST00000529002 TATDN1Q6P1N9 297 aa23.26■■□□□ 1.31
SSRP1-204ENST00000529002 DPP9Q86TI2 863 aa23.26■■□□□ 1.31
SSRP1-204ENST00000529002 RPAP3Q9H6T3 665 aaPredicted RBP23.26■■□□□ 1.31
SSRP1-204ENST00000529002 TNNQ9UQP3 1299 aa23.26■■□□□ 1.31
SSRP1-204ENST00000529002 ZNF236Q9UL36 1845 aa23.25■■□□□ 1.31
SSRP1-204ENST00000529002 COBLO75128 1261 aa23.25■■□□□ 1.31
SSRP1-204ENST00000529002 ADORA2AP29274 412 aa23.25■■□□□ 1.31
SSRP1-204ENST00000529002 ZAP70P43403 619 aa23.25■■□□□ 1.31
SSRP1-204ENST00000529002 SNX17Q15036 470 aa23.25■■□□□ 1.31
SSRP1-204ENST00000529002 LBX2Q6XYB7 198 aa23.25■■□□□ 1.31
SSRP1-204ENST00000529002 MIGA1Q8NAN2 632 aa23.25■■□□□ 1.31
SSRP1-204ENST00000529002 GNAI3P08754 354 aa23.24■■□□□ 1.31
SSRP1-204ENST00000529002 MOV10L1Q9BXT6 1211 aaKnown RBP23.24■■□□□ 1.31
SSRP1-204ENST00000529002 KIAA1683Q9H0B3 1180 aa23.24■■□□□ 1.31
SSRP1-204ENST00000529002 CYP7A1P22680 504 aa23.23■■□□□ 1.31
SSRP1-204ENST00000529002 GUCY1A2P33402 732 aa23.23■■□□□ 1.31
SSRP1-204ENST00000529002 USP14P54578 494 aa23.23■■□□□ 1.31
SSRP1-204ENST00000529002 TLE2Q04725 743 aa23.23■■□□□ 1.31
SSRP1-204ENST00000529002 GRIN2CQ14957 1233 aa23.23■■□□□ 1.31
SSRP1-204ENST00000529002 LRRC41Q15345 812 aa23.23■■□□□ 1.31
SSRP1-204ENST00000529002 ABCB5Q2M3G0 1257 aa23.23■■□□□ 1.31
SSRP1-204ENST00000529002 FAM47AQ5JRC9 791 aa23.23■■□□□ 1.31
SSRP1-204ENST00000529002 SEPT4O43236 478 aa23.22■■□□□ 1.31
SSRP1-204ENST00000529002 COL9A1P20849 921 aa23.22■■□□□ 1.31
SSRP1-204ENST00000529002 EVX2Q03828 476 aa23.22■■□□□ 1.31
SSRP1-204ENST00000529002 CERKLQ49MI3 558 aaPredicted RBP23.22■■□□□ 1.31
SSRP1-204ENST00000529002 ATF7IPQ6VMQ6 1270 aa23.22■■□□□ 1.31
SSRP1-204ENST00000529002 TRMT2AQ8IZ69 625 aaKnown RBP23.22■■□□□ 1.31
SSRP1-204ENST00000529002 RNPC3Q96LT9 517 aaKnown RBP23.22■■□□□ 1.31
SSRP1-204ENST00000529002 SERPINB13Q9UIV8 391 aa23.22■■□□□ 1.31
SSRP1-204ENST00000529002 USP5P45974 858 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms