RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 MTFR1LQ9H019 292 aa8.93□□□□□ -0.98
SOX6-211ENST00000528429 TMEM63CQ9P1W3 806 aa8.93□□□□□ -0.98
SOX6-211ENST00000528429 TCHHQ07283 1943 aa8.92□□□□□ -0.98
SOX6-211ENST00000528429 GOLGA6L4A6NEF3 574 aa8.92□□□□□ -0.98
SOX6-211ENST00000528429 GOLGA6L3A6NEY3 463 aa8.92□□□□□ -0.98
SOX6-211ENST00000528429 YDJCA8MPS7 323 aa8.92□□□□□ -0.98
SOX6-211ENST00000528429 WDHD1O75717 1129 aaPredicted RBP8.92□□□□□ -0.98
SOX6-211ENST00000528429 IFNAR1P17181 557 aa8.92□□□□□ -0.98
SOX6-211ENST00000528429 GUCY1A2P33402 732 aa8.92□□□□□ -0.98
SOX6-211ENST00000528429 CDK8P49336 464 aa8.92□□□□□ -0.98
SOX6-211ENST00000528429 UBE2HP62256 183 aa8.92□□□□□ -0.98
SOX6-211ENST00000528429 NFIAQ12857 509 aa8.92□□□□□ -0.98
SOX6-211ENST00000528429 TRIM29Q14134 588 aa8.92□□□□□ -0.98
SOX6-211ENST00000528429 ZSCAN23Q3MJ62 389 aa8.92□□□□□ -0.98
SOX6-211ENST00000528429 APOBEC3HQ6NTF7 200 aaKnown RBP8.92□□□□□ -0.98
SOX6-211ENST00000528429 RINLQ6ZS11 566 aa8.92□□□□□ -0.98
SOX6-211ENST00000528429 TMEM87AQ8NBN3 555 aa8.92□□□□□ -0.98
SOX6-211ENST00000528429 KAT14Q9H8E8 782 aa8.92□□□□□ -0.98
SOX6-211ENST00000528429 PIM2Q9P1W9 311 aa8.92□□□□□ -0.98
SOX6-211ENST00000528429 PLEKHA8P1O95397 391 aa8.92□□□□□ -0.98
SOX6-211ENST00000528429 RASA1P20936 1047 aa8.92□□□□□ -0.98
SOX6-211ENST00000528429 AKAP17AQ02040 695 aaKnown RBP8.92□□□□□ -0.98
SOX6-211ENST00000528429 L1TD1Q5T7N2 865 aaKnown RBP8.92□□□□□ -0.98
SOX6-211ENST00000528429 HHIPL2Q6UWX4 724 aa8.92□□□□□ -0.98
SOX6-211ENST00000528429 SCAND2PQ9GZW5 306 aaPredicted RBP8.92□□□□□ -0.98
SOX6-211ENST00000528429 ZNF287Q9HBT7 754 aa8.92□□□□□ -0.98
SOX6-211ENST00000528429 ZNF500O60304 480 aaPredicted RBP8.91□□□□□ -0.98
SOX6-211ENST00000528429 FMNL1O95466 1100 aaPredicted RBP8.91□□□□□ -0.98
SOX6-211ENST00000528429 TROAPQ12815 778 aa8.91□□□□□ -0.98
SOX6-211ENST00000528429 KRT40Q6A162 431 aa8.91□□□□□ -0.98
SOX6-211ENST00000528429 ZSCAN29Q8IWY8 852 aaPredicted RBP8.91□□□□□ -0.98
SOX6-211ENST00000528429 CTCFLQ8NI51 663 aaPredicted RBP8.91□□□□□ -0.98
SOX6-211ENST00000528429 LEO1Q8WVC0 666 aaPredicted RBP8.91□□□□□ -0.98
SOX6-211ENST00000528429 ZBTB9Q96C00 473 aa8.91□□□□□ -0.98
SOX6-211ENST00000528429 IL17RBQ9NRM6 502 aa8.91□□□□□ -0.98
SOX6-211ENST00000528429 QSER1Q2KHR3 1735 aa8.91□□□□□ -0.98
SOX6-211ENST00000528429 SYCE3A1L190 88 aa8.91□□□□□ -0.98
SOX6-211ENST00000528429 SLURP2P0DP57 97 aa8.91□□□□□ -0.98
SOX6-211ENST00000528429 CCDC96Q2M329 555 aa8.91□□□□□ -0.98
SOX6-211ENST00000528429 DALRD3Q5D0E6 543 aaKnown RBP8.91□□□□□ -0.98
SOX6-211ENST00000528429 RCSD1Q6JBY9 416 aa8.91□□□□□ -0.98
SOX6-211ENST00000528429 C16orf86Q6ZW13 317 aa8.91□□□□□ -0.98
SOX6-211ENST00000528429 ILDR1Q86SU0 546 aaPredicted RBP8.91□□□□□ -0.98
SOX6-211ENST00000528429 CRACR2BQ8N4Y2 399 aaPredicted RBP8.91□□□□□ -0.98
SOX6-211ENST00000528429 ZNF513Q8N8E2 541 aaPredicted RBP8.91□□□□□ -0.98
SOX6-211ENST00000528429 PNMA1Q8ND90 353 aa8.91□□□□□ -0.98
SOX6-211ENST00000528429 USP28Q96RU2 1077 aa8.91□□□□□ -0.98
SOX6-211ENST00000528429 CFAP45Q9UL16 551 aa8.91□□□□□ -0.98
SOX6-211ENST00000528429 ROBO3Q96MS0 1386 aa8.91□□□□□ -0.98
SOX6-211ENST00000528429 KIF28PB7ZC32 967 aa8.9□□□□□ -0.98
SOX6-211ENST00000528429 GAS2L3Q86XJ1 694 aa8.9□□□□□ -0.98
SOX6-211ENST00000528429 ZDHHC15Q96MV8 337 aa8.9□□□□□ -0.98
SOX6-211ENST00000528429 KCNJ14Q9UNX9 436 aa8.9□□□□□ -0.98
SOX6-211ENST00000528429 BCS1LQ9Y276 419 aa8.9□□□□□ -0.98
SOX6-211ENST00000528429 KIAA1551Q9HCM1 1747 aa8.9□□□□□ -0.98
SOX6-211ENST00000528429 SNED1Q8TER0 1413 aa8.9□□□□□ -0.98
SOX6-211ENST00000528429 FAM196BA6NMK8 535 aa8.9□□□□□ -0.98
SOX6-211ENST00000528429 PSMD14O00487 310 aa8.9□□□□□ -0.98
SOX6-211ENST00000528429 DDAH1O94760 285 aa8.9□□□□□ -0.98
SOX6-211ENST00000528429 DEXIO95424 95 aa8.9□□□□□ -0.98
SOX6-211ENST00000528429 CALM1P0DP23 149 aa8.9□□□□□ -0.98
SOX6-211ENST00000528429 CALM2P0DP24 149 aa8.9□□□□□ -0.98
SOX6-211ENST00000528429 CALM3P0DP25 149 aa8.9□□□□□ -0.98
SOX6-211ENST00000528429 RCAN1P53805 252 aa8.9□□□□□ -0.98
SOX6-211ENST00000528429 EIF6P56537 245 aaKnown RBP8.9□□□□□ -0.98
SOX6-211ENST00000528429 KIF23Q02241 960 aaPredicted RBP8.9□□□□□ -0.98
SOX6-211ENST00000528429 ZFPM1Q8IX07 1006 aa8.9□□□□□ -0.98
SOX6-211ENST00000528429 BICD2Q8TD16 824 aa8.9□□□□□ -0.98
SOX6-211ENST00000528429 WASF1Q92558 559 aa8.9□□□□□ -0.98
SOX6-211ENST00000528429 SYAP1Q96A49 352 aaPredicted RBP8.9□□□□□ -0.98
SOX6-211ENST00000528429 ZNF396Q96N95 335 aaPredicted RBP8.9□□□□□ -0.98
SOX6-211ENST00000528429 OSBPL5Q9H0X9 879 aaPredicted RBP8.9□□□□□ -0.98
SOX6-211ENST00000528429 TDRD3Q9H7E2 651 aaKnown RBP8.9□□□□□ -0.98
SOX6-211ENST00000528429 SERPINB13Q9UIV8 391 aa8.9□□□□□ -0.98
SOX6-211ENST00000528429 V9GY48 417 aaPredicted RBP8.9□□□□□ -0.98
SOX6-211ENST00000528429 SCN9AQ15858 1988 aa8.9□□□□□ -0.98
SOX6-211ENST00000528429 HLA-DOAP06340 250 aa8.89□□□□□ -0.99
SOX6-211ENST00000528429 TGFB2P61812 414 aa8.89□□□□□ -0.99
SOX6-211ENST00000528429 CFAP100Q494V2 611 aa8.89□□□□□ -0.99
SOX6-211ENST00000528429 UTP14CQ5TAP6 766 aaKnown RBP8.89□□□□□ -0.99
SOX6-211ENST00000528429 CLEC10AQ8IUN9 316 aa8.89□□□□□ -0.99
SOX6-211ENST00000528429 NIM1KQ8IY84 436 aa8.89□□□□□ -0.99
SOX6-211ENST00000528429 NAV1Q8NEY1 1877 aa8.89□□□□□ -0.99
SOX6-211ENST00000528429 MPHOSPH10O00566 681 aaKnown RBP8.89□□□□□ -0.99
SOX6-211ENST00000528429 CLCN1P35523 988 aa8.89□□□□□ -0.99
SOX6-211ENST00000528429 ME1P48163 572 aa8.89□□□□□ -0.99
SOX6-211ENST00000528429 PPP2R5BQ15173 497 aa8.89□□□□□ -0.99
SOX6-211ENST00000528429 SAFBQ15424 915 aaKnown RBP eCLIP8.89□□□□□ -0.99
SOX6-211ENST00000528429 RASGRP2Q7LDG7 609 aa8.89□□□□□ -0.99
SOX6-211ENST00000528429 DGKHQ86XP1 1220 aa8.89□□□□□ -0.99
SOX6-211ENST00000528429 UPF1Q92900 1129 aaKnown RBP eCLIP8.89□□□□□ -0.99
SOX6-211ENST00000528429 CEP95Q96GE4 821 aa8.89□□□□□ -0.99
SOX6-211ENST00000528429 RBM28Q9NW13 759 aaKnown RBP8.89□□□□□ -0.99
SOX6-211ENST00000528429 VPS54Q9P1Q0 977 aa8.89□□□□□ -0.99
SOX6-211ENST00000528429 SERPINA10Q9UK55 444 aa8.89□□□□□ -0.99
SOX6-211ENST00000528429 STK36Q9NRP7 1315 aa8.89□□□□□ -0.99
SOX6-211ENST00000528429 LAMB1P07942 1786 aa8.89□□□□□ -0.99
SOX6-211ENST00000528429 ADAMTSL1Q8N6G6 1762 aa8.88□□□□□ -0.99
SOX6-211ENST00000528429 CLRN2A0PK11 232 aa8.88□□□□□ -0.99
SOX6-211ENST00000528429 GOLGA8HP0CJ92 632 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms