RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 SLC4A4Q9Y6R1 1079 aa11.53□□□□□ -0.56
CHD7-208ENST00000528280 MYPNQ86TC9 1320 aa11.53□□□□□ -0.56
CHD7-208ENST00000528280 MYH1P12882 1939 aa11.52□□□□□ -0.56
CHD7-208ENST00000528280 MPHOSPH10O00566 681 aaKnown RBP11.52□□□□□ -0.57
CHD7-208ENST00000528280 SHMT1P34896 483 aa11.52□□□□□ -0.57
CHD7-208ENST00000528280 JAG1P78504 1218 aa11.52□□□□□ -0.57
CHD7-208ENST00000528280 IRF5Q13568 498 aa11.52□□□□□ -0.57
CHD7-208ENST00000528280 C12orf60Q5U649 245 aa11.52□□□□□ -0.57
CHD7-208ENST00000528280 TMEM179Q6ZVK1 233 aa11.52□□□□□ -0.57
CHD7-208ENST00000528280 CCAR1Q8IX12 1150 aaKnown RBP11.52□□□□□ -0.57
CHD7-208ENST00000528280 SLAIN1Q8ND83 568 aa11.52□□□□□ -0.57
CHD7-208ENST00000528280 GPRC5AQ8NFJ5 357 aa11.52□□□□□ -0.57
CHD7-208ENST00000528280 NKX2-3Q8TAU0 364 aa11.52□□□□□ -0.57
CHD7-208ENST00000528280 PXYLP1Q8TE99 480 aa11.52□□□□□ -0.57
CHD7-208ENST00000528280 C12orf42Q96LP6 360 aa11.52□□□□□ -0.57
CHD7-208ENST00000528280 STRBPQ96SI9 672 aaKnown RBP11.52□□□□□ -0.57
CHD7-208ENST00000528280 SH2D4AQ9H788 454 aa11.52□□□□□ -0.57
CHD7-208ENST00000528280 EMILIN3Q9NT22 766 aa11.52□□□□□ -0.57
CHD7-208ENST00000528280 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.52□□□□□ -0.57
CHD7-208ENST00000528280 MORF4L1Q9UBU8 362 aa11.52□□□□□ -0.57
CHD7-208ENST00000528280 BIN2Q9UBW5 565 aaPredicted RBP11.52□□□□□ -0.57
CHD7-208ENST00000528280 PHIPQ8WWQ0 1821 aa11.51□□□□□ -0.57
CHD7-208ENST00000528280 USP17L12C9JPN9 530 aa11.51□□□□□ -0.57
CHD7-208ENST00000528280 USP17L21D6R901 530 aa11.51□□□□□ -0.57
CHD7-208ENST00000528280 MX1P20591 662 aa11.51□□□□□ -0.57
CHD7-208ENST00000528280 CAP1Q01518 475 aa11.51□□□□□ -0.57
CHD7-208ENST00000528280 SBK1Q52WX2 424 aa11.51□□□□□ -0.57
CHD7-208ENST00000528280 P2RX7Q99572 595 aaKnown RBP11.51□□□□□ -0.57
CHD7-208ENST00000528280 NACAP1Q9BZK3 213 aa11.51□□□□□ -0.57
CHD7-208ENST00000528280 PUS7LQ9H0K6 701 aaKnown RBP11.51□□□□□ -0.57
CHD7-208ENST00000528280 ARHGEF10LQ9HCE6 1279 aa11.51□□□□□ -0.57
CHD7-208ENST00000528280 HOXC10Q9NYD6 342 aa11.51□□□□□ -0.57
CHD7-208ENST00000528280 ARPP21Q9UBL0 812 aaPredicted RBP11.51□□□□□ -0.57
CHD7-208ENST00000528280 CDK5RAP2Q96SN8 1893 aa11.51□□□□□ -0.57
CHD7-208ENST00000528280 PATL2C9JE40 543 aaKnown RBP11.5□□□□□ -0.57
CHD7-208ENST00000528280 PRKAB2O43741 272 aa11.5□□□□□ -0.57
CHD7-208ENST00000528280 CTGFP29279 349 aa11.5□□□□□ -0.57
CHD7-208ENST00000528280 MAPK4P31152 587 aa11.5□□□□□ -0.57
CHD7-208ENST00000528280 FLT3LGP49771 235 aa11.5□□□□□ -0.57
CHD7-208ENST00000528280 HERVK_113P62684 666 aa11.5□□□□□ -0.57
CHD7-208ENST00000528280 CCNA1P78396 465 aa11.5□□□□□ -0.57
CHD7-208ENST00000528280 CTR9Q6PD62 1173 aa11.5□□□□□ -0.57
CHD7-208ENST00000528280 CATSPERGQ6ZRH7 1159 aa11.5□□□□□ -0.57
CHD7-208ENST00000528280 KANSL2Q9H9L4 492 aa11.5□□□□□ -0.57
CHD7-208ENST00000528280 STAP2Q9UGK3 403 aa11.5□□□□□ -0.57
CHD7-208ENST00000528280 ATAD5Q96QE3 1844 aa11.49□□□□□ -0.57
CHD7-208ENST00000528280 ADCY3O60266 1144 aa11.49□□□□□ -0.57
CHD7-208ENST00000528280 APPP05067 770 aa11.49□□□□□ -0.57
CHD7-208ENST00000528280 SLC3A2P08195 630 aaKnown RBP11.49□□□□□ -0.57
CHD7-208ENST00000528280 CDK8P49336 464 aa11.49□□□□□ -0.57
CHD7-208ENST00000528280 PRKCZQ05513 592 aa11.49□□□□□ -0.57
CHD7-208ENST00000528280 SEPT2Q15019 361 aa11.49□□□□□ -0.57
CHD7-208ENST00000528280 C16orf86Q6ZW13 317 aa11.49□□□□□ -0.57
CHD7-208ENST00000528280 TRMT44Q8IYL2 757 aaKnown RBP11.49□□□□□ -0.57
CHD7-208ENST00000528280 PI4K2BQ8TCG2 481 aa11.49□□□□□ -0.57
CHD7-208ENST00000528280 SH3TC2Q8TF17 1288 aa11.49□□□□□ -0.57
CHD7-208ENST00000528280 LPAR1Q92633 364 aa11.49□□□□□ -0.57
CHD7-208ENST00000528280 EVI5LQ96CN4 794 aa11.49□□□□□ -0.57
CHD7-208ENST00000528280 FSD1Q9BTV5 496 aa11.49□□□□□ -0.57
CHD7-208ENST00000528280 MKNK2Q9HBH9 465 aa11.49□□□□□ -0.57
CHD7-208ENST00000528280 RABGAP1Q9Y3P9 1069 aa11.49□□□□□ -0.57
CHD7-208ENST00000528280 UNC80Q8N2C7 3258 aa11.49□□□□□ -0.57
CHD7-208ENST00000528280 PTPRFP10586 1907 aa11.48□□□□□ -0.57
CHD7-208ENST00000528280 GSG1L2A8MUP6 293 aa11.48□□□□□ -0.57
CHD7-208ENST00000528280 ECM2O94769 699 aaPredicted RBP11.48□□□□□ -0.57
CHD7-208ENST00000528280 GJB1P08034 283 aa11.48□□□□□ -0.57
CHD7-208ENST00000528280 GUCY1A2P33402 732 aa11.48□□□□□ -0.57
CHD7-208ENST00000528280 COG2Q14746 738 aa11.48□□□□□ -0.57
CHD7-208ENST00000528280 SLFNL1Q499Z3 407 aa11.48□□□□□ -0.57
CHD7-208ENST00000528280 LBX2Q6XYB7 198 aa11.48□□□□□ -0.57
CHD7-208ENST00000528280 ZNF444Q8N0Y2 327 aaPredicted RBP11.48□□□□□ -0.57
CHD7-208ENST00000528280 ACER1Q8TDN7 264 aa11.48□□□□□ -0.57
CHD7-208ENST00000528280 OSBP2Q969R2 916 aa11.48□□□□□ -0.57
CHD7-208ENST00000528280 NUDT12Q9BQG2 462 aa11.48□□□□□ -0.57
CHD7-208ENST00000528280 CWC22Q9HCG8 908 aaKnown RBP11.48□□□□□ -0.57
CHD7-208ENST00000528280 RBPJLQ9UBG7 517 aa11.48□□□□□ -0.57
CHD7-208ENST00000528280 GABRQQ9UN88 632 aa11.48□□□□□ -0.57
CHD7-208ENST00000528280 SIPA1L1O43166 1804 aa11.47□□□□□ -0.57
CHD7-208ENST00000528280 A0A1W2PPC1 479 aa11.47□□□□□ -0.57
CHD7-208ENST00000528280 MINDY4BA8MYZ0 360 aa11.47□□□□□ -0.57
CHD7-208ENST00000528280 SOX1O00570 391 aaPredicted RBP11.47□□□□□ -0.57
CHD7-208ENST00000528280 GPAA1O43292 621 aa11.47□□□□□ -0.57
CHD7-208ENST00000528280 CYP2D6P10635 497 aa11.47□□□□□ -0.57
CHD7-208ENST00000528280 XRCC5P13010 732 aaKnown RBP11.47□□□□□ -0.57
CHD7-208ENST00000528280 TDO2P48775 406 aa11.47□□□□□ -0.57
CHD7-208ENST00000528280 ERVK-9P63128 1117 aa11.47□□□□□ -0.57
CHD7-208ENST00000528280 ERVK-24P63145 666 aa11.47□□□□□ -0.57
CHD7-208ENST00000528280 ZYXQ15942 572 aaKnown RBP11.47□□□□□ -0.57
CHD7-208ENST00000528280 SHROOM1Q2M3G4 852 aaPredicted RBP11.47□□□□□ -0.57
CHD7-208ENST00000528280 TSHZ3Q63HK5 1081 aa11.47□□□□□ -0.57
CHD7-208ENST00000528280 SMC5Q8IY18 1101 aa11.47□□□□□ -0.57
CHD7-208ENST00000528280 SOCS4Q8WXH5 440 aa11.47□□□□□ -0.57
CHD7-208ENST00000528280 DPF3Q92784 378 aa11.47□□□□□ -0.57
CHD7-208ENST00000528280 DYNLL2Q96FJ2 89 aa11.47□□□□□ -0.57
CHD7-208ENST00000528280 COL25A1Q9BXS0 654 aaPredicted RBP11.47□□□□□ -0.57
CHD7-208ENST00000528280 RNF208Q9H0X6 261 aa11.47□□□□□ -0.57
CHD7-208ENST00000528280 GJD2Q9UKL4 321 aa11.47□□□□□ -0.57
CHD7-208ENST00000528280 TMX2Q9Y320 296 aa11.47□□□□□ -0.57
CHD7-208ENST00000528280 LOC285556D6RIA3 1793 aa11.46□□□□□ -0.57
CHD7-208ENST00000528280 CCL5P13501 91 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms