RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216	SHC4	Q6S5L8	630 aa		11.73	□□□□□ -0.53
PGAP2-231	ENST00000528216	TMTC3	Q6ZXV5	915 aa		11.73	□□□□□ -0.53
PGAP2-231	ENST00000528216	RPGR	Q92834	1020 aa	Known RBP	11.73	□□□□□ -0.53
PGAP2-231	ENST00000528216	FERMT2	Q96AC1	680 aa		11.73	□□□□□ -0.53
PGAP2-231	ENST00000528216	SH3GLB2	Q9NR46	395 aa		11.73	□□□□□ -0.53
PGAP2-231	ENST00000528216	GJB4	Q9NTQ9	266 aa		11.73	□□□□□ -0.53
PGAP2-231	ENST00000528216	TCP11L1	Q9NUJ3	509 aa		11.73	□□□□□ -0.53
PGAP2-231	ENST00000528216	ANKIB1	Q9P2G1	1089 aa		11.73	□□□□□ -0.53
PGAP2-231	ENST00000528216	DACH1	Q9UI36	760 aa		11.73	□□□□□ -0.53
PGAP2-231	ENST00000528216	SRPRB	Q9Y5M8	271 aa	Known RBP	11.73	□□□□□ -0.53
PGAP2-231	ENST00000528216	TRIM75P	A6NK02	468 aa		11.72	□□□□□ -0.53
PGAP2-231	ENST00000528216	BTBD18	B2RXH4	712 aa		11.72	□□□□□ -0.53
PGAP2-231	ENST00000528216	SERPINB2	P05120	415 aa		11.72	□□□□□ -0.53
PGAP2-231	ENST00000528216	CALML3	P27482	149 aa		11.72	□□□□□ -0.53
PGAP2-231	ENST00000528216	HOXA10	P31260	410 aa	Predicted RBP	11.72	□□□□□ -0.53
PGAP2-231	ENST00000528216	DDR1	Q08345	913 aa		11.72	□□□□□ -0.53
PGAP2-231	ENST00000528216	KRBA2	Q6ZNG9	492 aa		11.72	□□□□□ -0.53
PGAP2-231	ENST00000528216	TBC1D22A	Q8WUA7	517 aa		11.72	□□□□□ -0.53
PGAP2-231	ENST00000528216	SGIP1	Q9BQI5	828 aa		11.72	□□□□□ -0.53
PGAP2-231	ENST00000528216	LZTS2	Q9BRK4	669 aa		11.72	□□□□□ -0.53
PGAP2-231	ENST00000528216	ZKSCAN3	Q9BRR0	538 aa		11.72	□□□□□ -0.53
PGAP2-231	ENST00000528216	PHF20	Q9BVI0	1012 aa		11.72	□□□□□ -0.53
PGAP2-231	ENST00000528216	KCNH3	Q9ULD8	1083 aa		11.72	□□□□□ -0.53
PGAP2-231	ENST00000528216	MROH7-TTC4	A0A0A0MT08	1334 aa		11.72	□□□□□ -0.53
PGAP2-231	ENST00000528216	SRCAP	Q6ZRS2	3230 aa		11.72	□□□□□ -0.53
PGAP2-231	ENST00000528216	POLRMT	O00411	1230 aa	Known RBP	11.72	□□□□□ -0.53
PGAP2-231	ENST00000528216	DYNC1I1	O14576	645 aa		11.72	□□□□□ -0.53
PGAP2-231	ENST00000528216	NRDC	O43847	1150 aa		11.72	□□□□□ -0.53
PGAP2-231	ENST00000528216	CHAF1A	Q13111	956 aa	Predicted RBP	11.72	□□□□□ -0.53
PGAP2-231	ENST00000528216	C12orf60	Q5U649	245 aa		11.72	□□□□□ -0.53
PGAP2-231	ENST00000528216	GALNT17	Q6IS24	598 aa		11.72	□□□□□ -0.53
PGAP2-231	ENST00000528216	OLFM4	Q6UX06	510 aa		11.72	□□□□□ -0.53
PGAP2-231	ENST00000528216	CCDC186	Q7Z3E2	898 aa		11.72	□□□□□ -0.53
PGAP2-231	ENST00000528216	CRAMP1	Q96RY5	1269 aa		11.72	□□□□□ -0.53
PGAP2-231	ENST00000528216	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
PGAP2-231	ENST00000528216	PODXL2	Q9NZ53	605 aa		11.72	□□□□□ -0.53
PGAP2-231	ENST00000528216	LRRC37A	A6NMS7	1700 aa		11.71	□□□□□ -0.53
PGAP2-231	ENST00000528216	CBFA2T2	O43439	604 aa		11.71	□□□□□ -0.54
PGAP2-231	ENST00000528216	IL1R1	P14778	569 aa		11.71	□□□□□ -0.54
PGAP2-231	ENST00000528216	MARCKS	P29966	332 aa	Predicted RBP	11.71	□□□□□ -0.54
PGAP2-231	ENST00000528216	PRDX5	P30044	214 aa		11.71	□□□□□ -0.54
PGAP2-231	ENST00000528216	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.71	□□□□□ -0.54
PGAP2-231	ENST00000528216	PRR5L	Q6MZQ0	368 aa		11.71	□□□□□ -0.54
PGAP2-231	ENST00000528216	AOPEP	Q8N6M6	819 aa		11.71	□□□□□ -0.54
PGAP2-231	ENST00000528216	SPC24	Q8NBT2	197 aa		11.71	□□□□□ -0.54
PGAP2-231	ENST00000528216	CNNM3	Q8NE01	707 aa		11.71	□□□□□ -0.54
PGAP2-231	ENST00000528216	FAM163A	Q96GL9	167 aa	Predicted RBP	11.71	□□□□□ -0.54
PGAP2-231	ENST00000528216	KCNF1	Q9H3M0	494 aa		11.71	□□□□□ -0.54
PGAP2-231	ENST00000528216	MKRN1	Q9UHC7	482 aa	Known RBP	11.71	□□□□□ -0.54
PGAP2-231	ENST00000528216	FBXO2	Q9UK22	296 aa	Predicted RBP	11.71	□□□□□ -0.54
PGAP2-231	ENST00000528216	SUGT1	Q9Y2Z0	365 aa		11.71	□□□□□ -0.54
PGAP2-231	ENST00000528216	NAV1	Q8NEY1	1877 aa		11.71	□□□□□ -0.54
PGAP2-231	ENST00000528216	KLRG2	A4D1S0	409 aa	Predicted RBP	11.7	□□□□□ -0.54
PGAP2-231	ENST00000528216	TSPY2	A6NKD2	308 aa		11.7	□□□□□ -0.54
PGAP2-231	ENST00000528216	KLRK1	P26718	216 aa		11.7	□□□□□ -0.54
PGAP2-231	ENST00000528216	GUCY1A2	P33402	732 aa		11.7	□□□□□ -0.54
PGAP2-231	ENST00000528216	TOB1	P50616	345 aa	Predicted RBP	11.7	□□□□□ -0.54
PGAP2-231	ENST00000528216	PKN1	Q16512	942 aa		11.7	□□□□□ -0.54
PGAP2-231	ENST00000528216	NT5DC1	Q5TFE4	455 aa		11.7	□□□□□ -0.54
PGAP2-231	ENST00000528216	MTERF4	Q7Z6M4	381 aa	Known RBP	11.7	□□□□□ -0.54
PGAP2-231	ENST00000528216	CCDC24	Q8N4L8	307 aa		11.7	□□□□□ -0.54
PGAP2-231	ENST00000528216	OSBPL5	Q9H0X9	879 aa	Predicted RBP	11.7	□□□□□ -0.54
PGAP2-231	ENST00000528216	KCND1	Q9NSA2	647 aa		11.7	□□□□□ -0.54
PGAP2-231	ENST00000528216	GGA1	Q9UJY5	639 aa		11.7	□□□□□ -0.54
PGAP2-231	ENST00000528216	R3HCC1	Q9Y3T6	440 aa	Known RBP	11.7	□□□□□ -0.54
PGAP2-231	ENST00000528216	CNTNAP5	Q8WYK1	1306 aa		11.7	□□□□□ -0.54
PGAP2-231	ENST00000528216	PTGS1	P23219	599 aa		11.7	□□□□□ -0.54
PGAP2-231	ENST00000528216	USP5	P45974	858 aa		11.7	□□□□□ -0.54
PGAP2-231	ENST00000528216	KCNJ6	P48051	423 aa		11.7	□□□□□ -0.54
PGAP2-231	ENST00000528216	MYL5	Q02045	173 aa		11.7	□□□□□ -0.54
PGAP2-231	ENST00000528216	DPCR1	Q3MIW9	517 aa		11.7	□□□□□ -0.54
PGAP2-231	ENST00000528216	STK11IP	Q8N1F8	1099 aa		11.7	□□□□□ -0.54
PGAP2-231	ENST00000528216	MLKL	Q8NB16	471 aa		11.7	□□□□□ -0.54
PGAP2-231	ENST00000528216	CCDC150	Q8NCX0	1101 aa		11.7	□□□□□ -0.54
PGAP2-231	ENST00000528216	MAP7D2	Q96T17	732 aa		11.7	□□□□□ -0.54
PGAP2-231	ENST00000528216	KAT14	Q9H8E8	782 aa		11.7	□□□□□ -0.54
PGAP2-231	ENST00000528216	MCM9	Q9NXL9	1143 aa		11.7	□□□□□ -0.54
PGAP2-231	ENST00000528216	SMC2	O95347	1197 aa		11.69	□□□□□ -0.54
PGAP2-231	ENST00000528216	TUBB4A	P04350	444 aa		11.69	□□□□□ -0.54
PGAP2-231	ENST00000528216	SCG2	P13521	617 aa		11.69	□□□□□ -0.54
PGAP2-231	ENST00000528216	SMARCA1	P28370	1054 aa		11.69	□□□□□ -0.54
PGAP2-231	ENST00000528216	SEMA3F	Q13275	785 aa		11.69	□□□□□ -0.54
PGAP2-231	ENST00000528216	PFKFB3	Q16875	520 aa	Predicted RBP	11.69	□□□□□ -0.54
PGAP2-231	ENST00000528216	TAOK2	Q9UL54	1235 aa		11.69	□□□□□ -0.54
PGAP2-231	ENST00000528216	KCNJ14	Q9UNX9	436 aa		11.69	□□□□□ -0.54
PGAP2-231	ENST00000528216		V9GY48	417 aa	Predicted RBP	11.69	□□□□□ -0.54
PGAP2-231	ENST00000528216	FAM205A	Q6ZU69	1335 aa		11.68	□□□□□ -0.54
PGAP2-231	ENST00000528216	KIF2A	O00139	706 aa	Predicted RBP	11.68	□□□□□ -0.54
PGAP2-231	ENST00000528216	MYRIP	Q8NFW9	859 aa		11.68	□□□□□ -0.54
PGAP2-231	ENST00000528216	ZNF830	Q96NB3	372 aa	Predicted RBP	11.68	□□□□□ -0.54
PGAP2-231	ENST00000528216	CYP2D7	A0A087X1C5	515 aa		11.67	□□□□□ -0.54
PGAP2-231	ENST00000528216	GPR75-ASB3	A0A0A6YYF3	556 aa		11.67	□□□□□ -0.54
PGAP2-231	ENST00000528216	WTIP	A6NIX2	430 aa	Predicted RBP	11.67	□□□□□ -0.54
PGAP2-231	ENST00000528216	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.67	□□□□□ -0.54	7e-6	■■■■□ 21.3
PGAP2-231	ENST00000528216	GRM4	Q14833	912 aa		11.67	□□□□□ -0.54
PGAP2-231	ENST00000528216	POSTN	Q15063	836 aa		11.67	□□□□□ -0.54
PGAP2-231	ENST00000528216	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.67	□□□□□ -0.54
PGAP2-231	ENST00000528216	LRRC8A	Q8IWT6	810 aa		11.67	□□□□□ -0.54
PGAP2-231	ENST00000528216	ZNF444	Q8N0Y2	327 aa	Predicted RBP	11.67	□□□□□ -0.54
PGAP2-231	ENST00000528216	CCDC148	Q8NFR7	591 aa		11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms