RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 USP17L10C9JJH3 530 aa13.43□□□□□ -0.26
NR1H3-230ENST00000527949 HMGCS2P54868 508 aa13.43□□□□□ -0.26
NR1H3-230ENST00000527949 CCDC84Q86UT8 332 aaPredicted RBP13.43□□□□□ -0.26
NR1H3-230ENST00000527949 C7orf61Q8IZ16 206 aa13.43□□□□□ -0.26
NR1H3-230ENST00000527949 GTF3C2Q8WUA4 911 aaPredicted RBP13.43□□□□□ -0.26
NR1H3-230ENST00000527949 GPATCH3Q96I76 525 aa13.43□□□□□ -0.26
NR1H3-230ENST00000527949 C12orf42Q96LP6 360 aa13.43□□□□□ -0.26
NR1H3-230ENST00000527949 C11orf49Q9H6J7 331 aa13.43□□□□□ -0.26
NR1H3-230ENST00000527949 TMOD4Q9NZQ9 345 aa13.43□□□□□ -0.26
NR1H3-230ENST00000527949 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.43□□□□□ -0.26
NR1H3-230ENST00000527949 MORF4L1Q9UBU8 362 aa13.43□□□□□ -0.26
NR1H3-230ENST00000527949 SAP30BPQ9UHR5 308 aaKnown RBP13.43□□□□□ -0.26
NR1H3-230ENST00000527949 JAG1P78504 1218 aa13.42□□□□□ -0.26
NR1H3-230ENST00000527949 TREML2Q5T2D2 321 aa13.42□□□□□ -0.26
NR1H3-230ENST00000527949 DCP1AQ9NPI6 582 aaPredicted RBP13.42□□□□□ -0.26
NR1H3-230ENST00000527949 DOCK3Q8IZD9 2030 aa13.42□□□□□ -0.26
NR1H3-230ENST00000527949 TTC41PQ6P2S7 1318 aa13.41□□□□□ -0.26
NR1H3-230ENST00000527949 XRCC5P13010 732 aaKnown RBP13.41□□□□□ -0.26
NR1H3-230ENST00000527949 SHMT1P34896 483 aa13.41□□□□□ -0.26
NR1H3-230ENST00000527949 PLCD1P51178 756 aa13.41□□□□□ -0.26
NR1H3-230ENST00000527949 USP14P54578 494 aa13.41□□□□□ -0.26
NR1H3-230ENST00000527949 MTMR2Q13614 643 aa13.41□□□□□ -0.26
NR1H3-230ENST00000527949 CERKLQ49MI3 558 aaPredicted RBP13.41□□□□□ -0.26
NR1H3-230ENST00000527949 USP17L2Q6R6M4 530 aa13.41□□□□□ -0.26
NR1H3-230ENST00000527949 LCORLQ8N3X6 602 aa13.41□□□□□ -0.26
NR1H3-230ENST00000527949 SOCS4Q8WXH5 440 aa13.41□□□□□ -0.26
NR1H3-230ENST00000527949 EDC3Q96F86 508 aaKnown RBP13.41□□□□□ -0.26
NR1H3-230ENST00000527949 UBE2OQ9C0C9 1292 aaKnown RBP13.41□□□□□ -0.26
NR1H3-230ENST00000527949 KIAA1683Q9H0B3 1180 aa13.41□□□□□ -0.26
NR1H3-230ENST00000527949 ASCC2Q9H1I8 757 aaPredicted RBP13.41□□□□□ -0.26
NR1H3-230ENST00000527949 SWAP70Q9UH65 585 aa13.41□□□□□ -0.26
NR1H3-230ENST00000527949 OGDHLQ9ULD0 1010 aa13.41□□□□□ -0.26
NR1H3-230ENST00000527949 PCDHB15Q9Y5E8 787 aa13.41□□□□□ -0.26
NR1H3-230ENST00000527949 GDF11O95390 407 aa13.4□□□□□ -0.26
NR1H3-230ENST00000527949 GH2P01242 217 aa13.4□□□□□ -0.26
NR1H3-230ENST00000527949 POLR3DP05423 398 aaPredicted RBP13.4□□□□□ -0.26
NR1H3-230ENST00000527949 ZFYP08048 801 aaPredicted RBP13.4□□□□□ -0.26
NR1H3-230ENST00000527949 MAGEA10P43363 369 aaPredicted RBP13.4□□□□□ -0.26
NR1H3-230ENST00000527949 ABCB5Q2M3G0 1257 aa13.4□□□□□ -0.26
NR1H3-230ENST00000527949 LRRFIP1Q32MZ4 808 aaKnown RBP13.4□□□□□ -0.26
NR1H3-230ENST00000527949 GIMAP6Q6P9H5 292 aa13.4□□□□□ -0.26
NR1H3-230ENST00000527949 KBTBD3Q8NAB2 608 aa13.4□□□□□ -0.26
NR1H3-230ENST00000527949 DIS3LQ8TF46 1054 aaKnown RBP13.4□□□□□ -0.26
NR1H3-230ENST00000527949 CABP5Q9NP86 173 aa13.4□□□□□ -0.26
NR1H3-230ENST00000527949 MTMR10Q9NXD2 777 aa13.4□□□□□ -0.26
NR1H3-230ENST00000527949 MCM9Q9NXL9 1143 aa13.4□□□□□ -0.26
NR1H3-230ENST00000527949 GJD2Q9UKL4 321 aa13.4□□□□□ -0.26
NR1H3-230ENST00000527949 ZMYND8Q9ULU4 1186 aaPredicted RBP13.4□□□□□ -0.26
NR1H3-230ENST00000527949 SMARCA5O60264 1052 aaPredicted RBP13.39□□□□□ -0.27
NR1H3-230ENST00000527949 MBD4O95243 580 aa13.39□□□□□ -0.27
NR1H3-230ENST00000527949 IRX3P78415 501 aaPredicted RBP13.39□□□□□ -0.27
NR1H3-230ENST00000527949 FAM109BQ6ICB4 259 aaPredicted RBP13.39□□□□□ -0.27
NR1H3-230ENST00000527949 DDRGK1Q96HY6 314 aa13.39□□□□□ -0.27
NR1H3-230ENST00000527949 CCDC17Q96LX7 622 aa13.39□□□□□ -0.27
NR1H3-230ENST00000527949 NUDT12Q9BQG2 462 aa13.39□□□□□ -0.27
NR1H3-230ENST00000527949 ERC2O15083 957 aa13.38□□□□□ -0.27
NR1H3-230ENST00000527949 MAPK4P31152 587 aa13.38□□□□□ -0.27
NR1H3-230ENST00000527949 HDAC1Q13547 482 aaPredicted RBP13.38□□□□□ -0.27
NR1H3-230ENST00000527949 MAP3K21Q5TCX8 1036 aa13.38□□□□□ -0.27
NR1H3-230ENST00000527949 C12orf60Q5U649 245 aa13.38□□□□□ -0.27
NR1H3-230ENST00000527949 LBX2Q6XYB7 198 aa13.38□□□□□ -0.27
NR1H3-230ENST00000527949 TICAM2Q86XR7 235 aa13.38□□□□□ -0.27
NR1H3-230ENST00000527949 AMOTL1Q8IY63 956 aa13.38□□□□□ -0.27
NR1H3-230ENST00000527949 SDR42E1Q8WUS8 393 aa13.38□□□□□ -0.27
NR1H3-230ENST00000527949 ARMT1Q9H993 441 aa13.38□□□□□ -0.27
NR1H3-230ENST00000527949 EMILIN3Q9NT22 766 aa13.38□□□□□ -0.27
NR1H3-230ENST00000527949 MYH8P13535 1937 aa13.37□□□□□ -0.27
NR1H3-230ENST00000527949 BAZ2AQ9UIF9 1905 aaKnown RBP13.37□□□□□ -0.27
NR1H3-230ENST00000527949 LAMA3Q16787 3333 aa13.37□□□□□ -0.27
NR1H3-230ENST00000527949 GLRX3O76003 335 aaKnown RBP13.37□□□□□ -0.27
NR1H3-230ENST00000527949 GUCY1A2P33402 732 aa13.37□□□□□ -0.27
NR1H3-230ENST00000527949 HERVK_113P62684 666 aa13.37□□□□□ -0.27
NR1H3-230ENST00000527949 SHROOM1Q2M3G4 852 aaPredicted RBP13.37□□□□□ -0.27
NR1H3-230ENST00000527949 SBK1Q52WX2 424 aa13.37□□□□□ -0.27
NR1H3-230ENST00000527949 TMEM179Q6ZVK1 233 aa13.37□□□□□ -0.27
NR1H3-230ENST00000527949 CCAR1Q8IX12 1150 aaKnown RBP13.37□□□□□ -0.27
NR1H3-230ENST00000527949 GPRC5AQ8NFJ5 357 aa13.37□□□□□ -0.27
NR1H3-230ENST00000527949 APPBP2Q92624 585 aa13.37□□□□□ -0.27
NR1H3-230ENST00000527949 USP17L15C9J2P7 530 aa13.36□□□□□ -0.27
NR1H3-230ENST00000527949 USP17L13C9JLJ4 530 aa13.36□□□□□ -0.27
NR1H3-230ENST00000527949 USP17L11C9JVI0 530 aa13.36□□□□□ -0.27
NR1H3-230ENST00000527949 USP17L18D6R9N7 530 aa13.36□□□□□ -0.27
NR1H3-230ENST00000527949 USP17L22D6RA61 530 aa13.36□□□□□ -0.27
NR1H3-230ENST00000527949 USP17L17D6RBQ6 530 aa13.36□□□□□ -0.27
NR1H3-230ENST00000527949 USP17L19D6RCP7 530 aa13.36□□□□□ -0.27
NR1H3-230ENST00000527949 USP17L20D6RJB6 530 aa13.36□□□□□ -0.27
NR1H3-230ENST00000527949 RNF113AO15541 343 aaKnown RBP13.36□□□□□ -0.27
NR1H3-230ENST00000527949 PRKAR2AP13861 404 aaKnown RBP13.36□□□□□ -0.27
NR1H3-230ENST00000527949 ZKSCAN1P17029 563 aaPredicted RBP13.36□□□□□ -0.27
NR1H3-230ENST00000527949 SYN1P17600 705 aa13.36□□□□□ -0.27
NR1H3-230ENST00000527949 USP17L24Q0WX57 530 aa13.36□□□□□ -0.27
NR1H3-230ENST00000527949 C16orf86Q6ZW13 317 aa13.36□□□□□ -0.27
NR1H3-230ENST00000527949 TRIB2Q92519 343 aa13.36□□□□□ -0.27
NR1H3-230ENST00000527949 STRBPQ96SI9 672 aaKnown RBP13.36□□□□□ -0.27
NR1H3-230ENST00000527949 P2RX7Q99572 595 aaKnown RBP13.36□□□□□ -0.27
NR1H3-230ENST00000527949 FEZ1Q99689 392 aa13.36□□□□□ -0.27
NR1H3-230ENST00000527949 PUS7LQ9H0K6 701 aaKnown RBP13.36□□□□□ -0.27
NR1H3-230ENST00000527949 ARPP21Q9UBL0 812 aaPredicted RBP13.36□□□□□ -0.27
NR1H3-230ENST00000527949 RABGAP1Q9Y3P9 1069 aa13.36□□□□□ -0.27
NR1H3-230ENST00000527949 SALL3Q9BXA9 1300 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms