RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 USP17L15C9J2P7 530 aa22.83■■□□□ 1.25
CAPN1-206ENST00000526966 USP17L13C9JLJ4 530 aa22.83■■□□□ 1.25
CAPN1-206ENST00000526966 USP17L11C9JVI0 530 aa22.83■■□□□ 1.25
CAPN1-206ENST00000526966 USP17L18D6R9N7 530 aa22.83■■□□□ 1.25
CAPN1-206ENST00000526966 USP17L22D6RA61 530 aa22.83■■□□□ 1.25
CAPN1-206ENST00000526966 USP17L17D6RBQ6 530 aa22.83■■□□□ 1.25
CAPN1-206ENST00000526966 USP17L19D6RCP7 530 aa22.83■■□□□ 1.25
CAPN1-206ENST00000526966 USP17L20D6RJB6 530 aa22.83■■□□□ 1.25
CAPN1-206ENST00000526966 CNMDO75829 334 aa22.83■■□□□ 1.25
CAPN1-206ENST00000526966 COL6A1P12109 1028 aa22.83■■□□□ 1.25
CAPN1-206ENST00000526966 USP17L24Q0WX57 530 aa22.83■■□□□ 1.25
CAPN1-206ENST00000526966 MAP3K12Q12852 859 aa22.83■■□□□ 1.25
CAPN1-206ENST00000526966 CCL14Q16627 93 aa22.83■■□□□ 1.25
CAPN1-206ENST00000526966 CCAR1Q8IX12 1150 aaKnown RBP22.83■■□□□ 1.25
CAPN1-206ENST00000526966 FEZ1Q99689 392 aa22.83■■□□□ 1.25
CAPN1-206ENST00000526966 KIAA1683Q9H0B3 1180 aa22.83■■□□□ 1.25
CAPN1-206ENST00000526966 DNAH12Q6ZR08 3092 aa22.83■■□□□ 1.24
CAPN1-206ENST00000526966 USP14P54578 494 aa22.82■■□□□ 1.24
CAPN1-206ENST00000526966 ZYXQ15942 572 aaKnown RBP22.82■■□□□ 1.24
CAPN1-206ENST00000526966 LHX8Q68G74 356 aa22.82■■□□□ 1.24
CAPN1-206ENST00000526966 LBX2Q6XYB7 198 aa22.82■■□□□ 1.24
CAPN1-206ENST00000526966 TTC6Q86TZ1 520 aa22.82■■□□□ 1.24
CAPN1-206ENST00000526966 RIOK1Q9BRS2 568 aaKnown RBP22.82■■□□□ 1.24
CAPN1-206ENST00000526966 MYH8P13535 1937 aa22.81■■□□□ 1.24
CAPN1-206ENST00000526966 VCAM1P19320 739 aa22.81■■□□□ 1.24
CAPN1-206ENST00000526966 CCND3P30281 292 aaPredicted RBP22.81■■□□□ 1.24
CAPN1-206ENST00000526966 MAP2K5Q13163 448 aa22.81■■□□□ 1.24
CAPN1-206ENST00000526966 CERKLQ49MI3 558 aaPredicted RBP22.81■■□□□ 1.24
CAPN1-206ENST00000526966 CATSPERGQ6ZRH7 1159 aa22.81■■□□□ 1.24
CAPN1-206ENST00000526966 ERC1Q8IUD2 1116 aa22.81■■□□□ 1.24
CAPN1-206ENST00000526966 RLFQ13129 1914 aa22.8■■□□□ 1.24
CAPN1-206ENST00000526966 ZNF236Q9UL36 1845 aa22.8■■□□□ 1.24
CAPN1-206ENST00000526966 SHMT1P34896 483 aa22.8■■□□□ 1.24
CAPN1-206ENST00000526966 CCNA1P78396 465 aa22.8■■□□□ 1.24
CAPN1-206ENST00000526966 RAB3GAP1Q15042 981 aa22.8■■□□□ 1.24
CAPN1-206ENST00000526966 ABCB5Q2M3G0 1257 aa22.8■■□□□ 1.24
CAPN1-206ENST00000526966 AACSQ86V21 672 aa22.8■■□□□ 1.24
CAPN1-206ENST00000526966 ACER1Q8TDN7 264 aa22.8■■□□□ 1.24
CAPN1-206ENST00000526966 EXOC6BQ9Y2D4 811 aa22.8■■□□□ 1.24
CAPN1-206ENST00000526966 A0A0G2JMZ2 1700 aa22.79■■□□□ 1.24
CAPN1-206ENST00000526966 SYN1P17600 705 aa22.79■■□□□ 1.24
CAPN1-206ENST00000526966 MAGEA10P43363 369 aaPredicted RBP22.79■■□□□ 1.24
CAPN1-206ENST00000526966 PLCD1P51178 756 aa22.79■■□□□ 1.24
CAPN1-206ENST00000526966 GPR153Q6NV75 609 aa22.79■■□□□ 1.24
CAPN1-206ENST00000526966 GLRX3O76003 335 aaKnown RBP22.78■■□□□ 1.24
CAPN1-206ENST00000526966 GUCY1A2P33402 732 aa22.78■■□□□ 1.24
CAPN1-206ENST00000526966 GABPAQ06546 454 aa22.78■■□□□ 1.24
CAPN1-206ENST00000526966 SLC15A5A6NIM6 579 aa22.77■■□□□ 1.24
CAPN1-206ENST00000526966 SPDYE16A6NNV3 312 aaPredicted RBP22.77■■□□□ 1.24
CAPN1-206ENST00000526966 HOXC6P09630 235 aa22.77■■□□□ 1.24
CAPN1-206ENST00000526966 PTPREP23469 700 aa22.77■■□□□ 1.24
CAPN1-206ENST00000526966 HNRNPUQ00839 825 aaKnown RBP eCLIP22.77■■□□□ 1.24
CAPN1-206ENST00000526966 LRIT3Q3SXY7 679 aa22.77■■□□□ 1.24
CAPN1-206ENST00000526966 EDC3Q96F86 508 aaKnown RBP22.77■■□□□ 1.24
CAPN1-206ENST00000526966 CWC22Q9HCG8 908 aaKnown RBP22.77■■□□□ 1.24
CAPN1-206ENST00000526966 CABP5Q9NP86 173 aa22.77■■□□□ 1.24
CAPN1-206ENST00000526966 FLRT1Q9NZU1 646 aa22.77■■□□□ 1.24
CAPN1-206ENST00000526966 BTBD7Q9P203 1132 aa22.77■■□□□ 1.24
CAPN1-206ENST00000526966 PARP14Q460N5 1801 aa22.76■■□□□ 1.23
CAPN1-206ENST00000526966 GRB14Q14449 540 aa22.76■■□□□ 1.23
CAPN1-206ENST00000526966 TTF1Q15361 905 aaPredicted RBP22.76■■□□□ 1.23
CAPN1-206ENST00000526966 TDHQ8IZJ6 230 aa22.76■■□□□ 1.23
CAPN1-206ENST00000526966 A0A0C4DFX4 3053 aa22.76■■□□□ 1.23
CAPN1-206ENST00000526966 MAGEB6P1A0A0J9YX57 407 aa22.75■■□□□ 1.23
CAPN1-206ENST00000526966 PDE6AP16499 860 aa22.75■■□□□ 1.23
CAPN1-206ENST00000526966 LRRC26Q2I0M4 334 aa22.75■■□□□ 1.23
CAPN1-206ENST00000526966 HSP90AB4PQ58FF6 505 aa22.75■■□□□ 1.23
CAPN1-206ENST00000526966 MFSD14CQ5VZR4 134 aa22.75■■□□□ 1.23
CAPN1-206ENST00000526966 RHPN1Q8TCX5 695 aa22.75■■□□□ 1.23
CAPN1-206ENST00000526966 RPAP3Q9H6T3 665 aaPredicted RBP22.75■■□□□ 1.23
CAPN1-206ENST00000526966 IL1RAPL2Q9NP60 686 aa22.75■■□□□ 1.23
CAPN1-206ENST00000526966 IGHA2P01877 340 aa22.74■■□□□ 1.23
CAPN1-206ENST00000526966 POLR3DP05423 398 aaPredicted RBP22.74■■□□□ 1.23
CAPN1-206ENST00000526966 SEPT2Q15019 361 aa22.74■■□□□ 1.23
CAPN1-206ENST00000526966 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.74■■□□□ 1.23
CAPN1-206ENST00000526966 CRNKL1Q9BZJ0 848 aaKnown RBP22.74■■□□□ 1.23
CAPN1-206ENST00000526966 BAZ2AQ9UIF9 1905 aaKnown RBP22.74■■□□□ 1.23
CAPN1-206ENST00000526966 MYH7P12883 1935 aa22.73■■□□□ 1.23
CAPN1-206ENST00000526966 EVX2Q03828 476 aa22.73■■□□□ 1.23
CAPN1-206ENST00000526966 SLC9C2Q5TAH2 1124 aa22.73■■□□□ 1.23
CAPN1-206ENST00000526966 WDR78Q5VTH9 848 aa22.73■■□□□ 1.23
CAPN1-206ENST00000526966 PANK1Q8TE04 598 aa22.73■■□□□ 1.23
CAPN1-206ENST00000526966 IVNS1ABPQ9Y6Y0 642 aa22.73■■□□□ 1.23
CAPN1-206ENST00000526966 CUL9Q8IWT3 2517 aa22.73■■□□□ 1.23
CAPN1-206ENST00000526966 LAMA2P24043 3122 aaKnown RBP22.72■■□□□ 1.23
CAPN1-206ENST00000526966 A0A1W2PRG0 241 aa22.72■■□□□ 1.23
CAPN1-206ENST00000526966 TCRBV5S4A2TA0A5A2 114 aa22.72■■□□□ 1.23
CAPN1-206ENST00000526966 NPLOC4Q8TAT6 608 aa22.72■■□□□ 1.23
CAPN1-206ENST00000526966 UBE2OQ9C0C9 1292 aaKnown RBP22.72■■□□□ 1.23
CAPN1-206ENST00000526966 MCM9Q9NXL9 1143 aa22.72■■□□□ 1.23
CAPN1-206ENST00000526966 DDX20Q9UHI6 824 aaKnown RBP22.72■■□□□ 1.23
CAPN1-206ENST00000526966 MSCO60682 206 aa22.71■■□□□ 1.23
CAPN1-206ENST00000526966 DCP1AQ9NPI6 582 aaPredicted RBP22.71■■□□□ 1.23
CAPN1-206ENST00000526966 ZNF532Q9HCE3 1301 aa22.71■■□□□ 1.23
CAPN1-206ENST00000526966 ATP2B2Q01814 1243 aa22.7■■□□□ 1.22
CAPN1-206ENST00000526966 CLASRPQ8N2M8 674 aaKnown RBP22.7■■□□□ 1.22
CAPN1-206ENST00000526966 LCORLQ8N3X6 602 aa22.7■■□□□ 1.22
CAPN1-206ENST00000526966 SLC17A8Q8NDX2 589 aa22.7■■□□□ 1.22
CAPN1-206ENST00000526966 SDR42E1Q8WUS8 393 aa22.7■■□□□ 1.22
CAPN1-206ENST00000526966 LPAR1Q92633 364 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms