RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 PUM3Q15397 648 aaKnown RBP13.34□□□□□ -0.27
NEDD8-204ENST00000526430 MFSD14CQ5VZR4 134 aa13.34□□□□□ -0.27
NEDD8-204ENST00000526430 IL27Q8NEV9 243 aa13.34□□□□□ -0.27
NEDD8-204ENST00000526430 GTF3C2Q8WUA4 911 aaPredicted RBP13.34□□□□□ -0.27
NEDD8-204ENST00000526430 TRANK1O15050 2925 aa13.34□□□□□ -0.27
NEDD8-204ENST00000526430 GAKO14976 1311 aa13.34□□□□□ -0.27
NEDD8-204ENST00000526430 ZNFX1Q9P2E3 1918 aaKnown RBP13.33□□□□□ -0.28
NEDD8-204ENST00000526430 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.33□□□□□ -0.28
NEDD8-204ENST00000526430 A0A1B0GUL7 405 aa13.33□□□□□ -0.28
NEDD8-204ENST00000526430 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.33□□□□□ -0.28
NEDD8-204ENST00000526430 TRIM43BA6NCK2 446 aa13.33□□□□□ -0.28
NEDD8-204ENST00000526430 SMARCA5O60264 1052 aaPredicted RBP13.33□□□□□ -0.28
NEDD8-204ENST00000526430 RAB11FIP3O75154 756 aa13.33□□□□□ -0.28
NEDD8-204ENST00000526430 ERVK-9P63128 1117 aa13.33□□□□□ -0.28
NEDD8-204ENST00000526430 ERVK-24P63145 666 aa13.33□□□□□ -0.28
NEDD8-204ENST00000526430 MAP2K5Q13163 448 aa13.33□□□□□ -0.28
NEDD8-204ENST00000526430 TNNI3KQ59H18 835 aa13.33□□□□□ -0.28
NEDD8-204ENST00000526430 PLEKHH3Q7Z736 793 aa13.33□□□□□ -0.28
NEDD8-204ENST00000526430 ARRDC4Q8NCT1 418 aa13.33□□□□□ -0.28
NEDD8-204ENST00000526430 LPIN2Q92539 896 aa13.33□□□□□ -0.28
NEDD8-204ENST00000526430 TRIM43Q96BQ3 446 aaPredicted RBP13.33□□□□□ -0.28
NEDD8-204ENST00000526430 IL1RAPL2Q9NP60 686 aa13.33□□□□□ -0.28
NEDD8-204ENST00000526430 FPGT-TNNI3KV9GXZ4 949 aa13.33□□□□□ -0.28
NEDD8-204ENST00000526430 USP17L5A8MUK1 530 aa13.32□□□□□ -0.28
NEDD8-204ENST00000526430 ZBTB22O15209 634 aa13.32□□□□□ -0.28
NEDD8-204ENST00000526430 NPM3O75607 178 aaKnown RBP13.32□□□□□ -0.28
NEDD8-204ENST00000526430 SLURP2P0DP57 97 aa13.32□□□□□ -0.28
NEDD8-204ENST00000526430 ATP2B3Q16720 1220 aa13.32□□□□□ -0.28
NEDD8-204ENST00000526430 TRIM60Q495X7 471 aa13.32□□□□□ -0.28
NEDD8-204ENST00000526430 POTEEQ6S8J3 1075 aa13.32□□□□□ -0.28
NEDD8-204ENST00000526430 PIAS4Q8N2W9 510 aaPredicted RBP13.32□□□□□ -0.28
NEDD8-204ENST00000526430 TIFAQ96CG3 184 aa13.32□□□□□ -0.28
NEDD8-204ENST00000526430 XAGE2Q96GT9 111 aa13.32□□□□□ -0.28
NEDD8-204ENST00000526430 SNX27Q96L92 541 aa13.32□□□□□ -0.28
NEDD8-204ENST00000526430 P2RX7Q99572 595 aaKnown RBP13.32□□□□□ -0.28
NEDD8-204ENST00000526430 LRFN3Q9BTN0 628 aa13.32□□□□□ -0.28
NEDD8-204ENST00000526430 PORCNQ9H237 461 aa13.32□□□□□ -0.28
NEDD8-204ENST00000526430 AS3MTQ9HBK9 375 aa13.32□□□□□ -0.28
NEDD8-204ENST00000526430 DDX4Q9NQI0 724 aaKnown RBP13.32□□□□□ -0.28
NEDD8-204ENST00000526430 TLR7Q9NYK1 1049 aaKnown RBP13.32□□□□□ -0.28
NEDD8-204ENST00000526430 RBPJLQ9UBG7 517 aa13.32□□□□□ -0.28
NEDD8-204ENST00000526430 DBNLQ9UJU6 430 aaKnown RBP13.32□□□□□ -0.28
NEDD8-204ENST00000526430 KBTBD13C9JR72 458 aa13.31□□□□□ -0.28
NEDD8-204ENST00000526430 APBB1O00213 710 aa13.31□□□□□ -0.28
NEDD8-204ENST00000526430 CAP2P40123 477 aa13.31□□□□□ -0.28
NEDD8-204ENST00000526430 PHKA1P46020 1223 aa13.31□□□□□ -0.28
NEDD8-204ENST00000526430 HSP90AB4PQ58FF6 505 aa13.31□□□□□ -0.28
NEDD8-204ENST00000526430 SH3RF1Q7Z6J0 888 aa13.31□□□□□ -0.28
NEDD8-204ENST00000526430 CCAR1Q8IX12 1150 aaKnown RBP13.31□□□□□ -0.28
NEDD8-204ENST00000526430 KIF1BPQ96EK5 621 aa13.31□□□□□ -0.28
NEDD8-204ENST00000526430 EDC3Q96F86 508 aaKnown RBP13.31□□□□□ -0.28
NEDD8-204ENST00000526430 DBNDD2Q9BQY9 259 aa13.31□□□□□ -0.28
NEDD8-204ENST00000526430 WDR18Q9BV38 432 aa13.31□□□□□ -0.28
NEDD8-204ENST00000526430 CCDC8Q9H0W5 538 aaPredicted RBP13.31□□□□□ -0.28
NEDD8-204ENST00000526430 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.31□□□□□ -0.28
NEDD8-204ENST00000526430 LRRC37A2A6NM11 1700 aa13.3□□□□□ -0.28
NEDD8-204ENST00000526430 PEX10O60683 326 aa13.3□□□□□ -0.28
NEDD8-204ENST00000526430 GLRX3O76003 335 aaKnown RBP13.3□□□□□ -0.28
NEDD8-204ENST00000526430 IGHA2P01877 340 aa13.3□□□□□ -0.28
NEDD8-204ENST00000526430 HOXC6P09630 235 aa13.3□□□□□ -0.28
NEDD8-204ENST00000526430 EPHB4P54760 987 aa13.3□□□□□ -0.28
NEDD8-204ENST00000526430 BACE1P56817 501 aa13.3□□□□□ -0.28
NEDD8-204ENST00000526430 Q3C1V9 767 aa13.3□□□□□ -0.28
NEDD8-204ENST00000526430 CCDC102BQ68D86 513 aa13.3□□□□□ -0.28
NEDD8-204ENST00000526430 ERC1Q8IUD2 1116 aa13.3□□□□□ -0.28
NEDD8-204ENST00000526430 FAM163AQ96GL9 167 aaPredicted RBP13.3□□□□□ -0.28
NEDD8-204ENST00000526430 RWDD1Q9H446 243 aaPredicted RBP13.3□□□□□ -0.28
NEDD8-204ENST00000526430 FLRT1Q9NZU1 646 aa13.3□□□□□ -0.28
NEDD8-204ENST00000526430 CXXC1Q9P0U4 656 aaPredicted RBP13.3□□□□□ -0.28
NEDD8-204ENST00000526430 AKAP2Q9Y2D5 859 aa13.3□□□□□ -0.28
NEDD8-204ENST00000526430 TACC3Q9Y6A5 838 aa13.3□□□□□ -0.28
NEDD8-204ENST00000526430 SEMA3EO15041 775 aa13.29□□□□□ -0.28
NEDD8-204ENST00000526430 BMP1P13497 986 aa13.29□□□□□ -0.28
NEDD8-204ENST00000526430 CYBAP13498 195 aa13.29□□□□□ -0.28
NEDD8-204ENST00000526430 SLC5A1P13866 664 aa13.29□□□□□ -0.28
NEDD8-204ENST00000526430 CNGA1P29973 690 aa13.29□□□□□ -0.28
NEDD8-204ENST00000526430 OS9Q13438 667 aaPredicted RBP13.29□□□□□ -0.28
NEDD8-204ENST00000526430 MTMR2Q13614 643 aa13.29□□□□□ -0.28
NEDD8-204ENST00000526430 GJC2Q5T442 439 aaPredicted RBP13.29□□□□□ -0.28
NEDD8-204ENST00000526430 OTUD7AQ8TE49 926 aaPredicted RBP13.29□□□□□ -0.28
NEDD8-204ENST00000526430 PPM1EQ8WY54 764 aa13.29□□□□□ -0.28
NEDD8-204ENST00000526430 NEUROD6Q96NK8 337 aa13.29□□□□□ -0.28
NEDD8-204ENST00000526430 TMOD4Q9NZQ9 345 aa13.29□□□□□ -0.28
NEDD8-204ENST00000526430 SALL3Q9BXA9 1300 aa13.29□□□□□ -0.28
NEDD8-204ENST00000526430 SLC15A5A6NIM6 579 aa13.28□□□□□ -0.28
NEDD8-204ENST00000526430 FAM196BA6NMK8 535 aa13.28□□□□□ -0.28
NEDD8-204ENST00000526430 C19orf81C9J6K1 198 aa13.28□□□□□ -0.28
NEDD8-204ENST00000526430 KIAA0355O15063 1070 aa13.28□□□□□ -0.28
NEDD8-204ENST00000526430 ITGB8P26012 769 aa13.28□□□□□ -0.28
NEDD8-204ENST00000526430 FPGSQ05932 587 aa13.28□□□□□ -0.28
NEDD8-204ENST00000526430 PICALMQ13492 652 aa13.28□□□□□ -0.28
NEDD8-204ENST00000526430 SLF2Q8IX21 1173 aa13.28□□□□□ -0.28
NEDD8-204ENST00000526430 ZGPATQ8N5A5 531 aaKnown RBP13.28□□□□□ -0.28
NEDD8-204ENST00000526430 TRPV1Q8NER1 839 aa13.28□□□□□ -0.28
NEDD8-204ENST00000526430 LRRCC1Q9C099 1032 aa13.28□□□□□ -0.28
NEDD8-204ENST00000526430 CLTBP09497 229 aa13.27□□□□□ -0.29
NEDD8-204ENST00000526430 ARID4AP29374 1257 aaPredicted RBP13.27□□□□□ -0.29
NEDD8-204ENST00000526430 CCNA1P78396 465 aa13.27□□□□□ -0.29
NEDD8-204ENST00000526430 ATP2B2Q01814 1243 aa13.27□□□□□ -0.29
NEDD8-204ENST00000526430 TLE2Q04725 743 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms