RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 KRT71Q3SY84 523 aa10.4□□□□□ -0.74
CTNND1-213ENST00000526357 TTC38Q5R3I4 469 aa10.4□□□□□ -0.74
CTNND1-213ENST00000526357 MGARPQ8TDB4 240 aa10.4□□□□□ -0.74
CTNND1-213ENST00000526357 HIP1RO75146 1068 aa10.4□□□□□ -0.74
CTNND1-213ENST00000526357 NR1I2O75469 434 aa10.4□□□□□ -0.74
CTNND1-213ENST00000526357 STAM2O75886 525 aa10.4□□□□□ -0.74
CTNND1-213ENST00000526357 ANKRD20A4Q4UJ75 823 aa10.4□□□□□ -0.74
CTNND1-213ENST00000526357 ANKRD20A8PQ5CZ79 823 aa10.4□□□□□ -0.74
CTNND1-213ENST00000526357 ANKRD20A2Q5SQ80 823 aa10.4□□□□□ -0.74
CTNND1-213ENST00000526357 ANKRD20A1Q5TYW2 823 aa10.4□□□□□ -0.74
CTNND1-213ENST00000526357 MRPL44Q9H9J2 332 aaKnown RBP10.4□□□□□ -0.74
CTNND1-213ENST00000526357 EFCC1Q9HA90 598 aa10.4□□□□□ -0.74
CTNND1-213ENST00000526357 LUC7L3O95232 432 aaKnown RBP10.4□□□□□ -0.75
CTNND1-213ENST00000526357 RAD51AP2Q09MP3 1159 aa10.4□□□□□ -0.75
CTNND1-213ENST00000526357 BSPRYQ5W0U4 402 aa10.4□□□□□ -0.75
CTNND1-213ENST00000526357 CXorf38Q8TB03 319 aa10.4□□□□□ -0.75
CTNND1-213ENST00000526357 SNX29Q8TEQ0 813 aa10.4□□□□□ -0.75
CTNND1-213ENST00000526357 HOMER3Q9NSC5 361 aa10.4□□□□□ -0.75
CTNND1-213ENST00000526357 SCAF11Q99590 1463 aaKnown RBP10.4□□□□□ -0.75
CTNND1-213ENST00000526357 WDR97A6NE52 1622 aa10.4□□□□□ -0.75
CTNND1-213ENST00000526357 BAG2O95816 211 aa10.39□□□□□ -0.75
CTNND1-213ENST00000526357 RPS6KB1P23443 525 aa10.39□□□□□ -0.75
CTNND1-213ENST00000526357 NONOQ15233 471 aaKnown RBP eCLIP10.39□□□□□ -0.75
CTNND1-213ENST00000526357 OTUD6AQ7L8S5 288 aa10.39□□□□□ -0.75
CTNND1-213ENST00000526357 CADPS2Q86UW7 1296 aa10.39□□□□□ -0.75
CTNND1-213ENST00000526357 CCDC68Q9H2F9 335 aa10.39□□□□□ -0.75
CTNND1-213ENST00000526357 LRWD1Q9UFC0 647 aa10.39□□□□□ -0.75
CTNND1-213ENST00000526357 ARHGAP6O43182 974 aa10.39□□□□□ -0.75
CTNND1-213ENST00000526357 ATF7P17544 494 aaPredicted RBP10.39□□□□□ -0.75
CTNND1-213ENST00000526357 HSP90AA5PQ58FG0 334 aa10.39□□□□□ -0.75
CTNND1-213ENST00000526357 CCDC84Q86UT8 332 aaPredicted RBP10.39□□□□□ -0.75
CTNND1-213ENST00000526357 LRRC43Q8N309 656 aa10.39□□□□□ -0.75
CTNND1-213ENST00000526357 LINS1Q8NG48 757 aa10.39□□□□□ -0.75
CTNND1-213ENST00000526357 XAB2Q9HCS7 855 aaKnown RBP10.39□□□□□ -0.75
CTNND1-213ENST00000526357 TYW1Q9NV66 732 aaKnown RBP10.39□□□□□ -0.75
CTNND1-213ENST00000526357 HERC4Q5GLZ8 1057 aaPredicted RBP10.39□□□□□ -0.75
CTNND1-213ENST00000526357 NLRP7Q8WX94 980 aa10.39□□□□□ -0.75
CTNND1-213ENST00000526357 MIS12Q9H081 205 aa10.39□□□□□ -0.75
CTNND1-213ENST00000526357 TFCP2L1Q9NZI6 479 aa10.39□□□□□ -0.75
CTNND1-213ENST00000526357 PA2G4Q9UQ80 394 aaKnown RBP10.39□□□□□ -0.75
CTNND1-213ENST00000526357 GINS2Q9Y248 185 aa10.39□□□□□ -0.75
CTNND1-213ENST00000526357 ACEP12821 1306 aa10.39□□□□□ -0.75
CTNND1-213ENST00000526357 DDX39AO00148 427 aaKnown RBP10.39□□□□□ -0.75
CTNND1-213ENST00000526357 ITKQ08881 620 aa10.39□□□□□ -0.75
CTNND1-213ENST00000526357 NELFBQ8WX92 580 aa10.39□□□□□ -0.75
CTNND1-213ENST00000526357 SPDL1Q96EA4 605 aa10.39□□□□□ -0.75
CTNND1-213ENST00000526357 IWS1Q96ST2 819 aa10.39□□□□□ -0.75
CTNND1-213ENST00000526357 OAS2P29728 719 aaKnown RBP10.39□□□□□ -0.75
CTNND1-213ENST00000526357 CTNNA1P35221 906 aaKnown RBP10.39□□□□□ -0.75
CTNND1-213ENST00000526357 YARSP54577 528 aaKnown RBP10.39□□□□□ -0.75
CTNND1-213ENST00000526357 CHRNA2Q15822 529 aa10.39□□□□□ -0.75
CTNND1-213ENST00000526357 MMEL1Q495T6 779 aa10.39□□□□□ -0.75
CTNND1-213ENST00000526357 MAEAQ7L5Y9 396 aa10.39□□□□□ -0.75
CTNND1-213ENST00000526357 PPP1R9AQ9ULJ8 1098 aa10.39□□□□□ -0.75
CTNND1-213ENST00000526357 POLR2DO15514 142 aaKnown RBP10.38□□□□□ -0.75
CTNND1-213ENST00000526357 SLC8A1P32418 973 aa10.38□□□□□ -0.75
CTNND1-213ENST00000526357 MAP2K2P36507 400 aa10.38□□□□□ -0.75
CTNND1-213ENST00000526357 DDB1Q16531 1140 aa10.38□□□□□ -0.75
CTNND1-213ENST00000526357 CALCRLQ16602 461 aa10.38□□□□□ -0.75
CTNND1-213ENST00000526357 BBOF1Q8ND07 529 aa10.38□□□□□ -0.75
CTNND1-213ENST00000526357 GJA3Q9Y6H8 435 aa10.38□□□□□ -0.75
CTNND1-213ENST00000526357 PPP2R5BQ15173 497 aa10.38□□□□□ -0.75
CTNND1-213ENST00000526357 PDCD7Q8N8D1 485 aaKnown RBP10.38□□□□□ -0.75
CTNND1-213ENST00000526357 RABEP2Q9H5N1 569 aa10.38□□□□□ -0.75
CTNND1-213ENST00000526357 TRIM35Q9UPQ4 493 aa10.38□□□□□ -0.75
CTNND1-213ENST00000526357 ORC6Q9Y5N6 252 aa10.38□□□□□ -0.75
CTNND1-213ENST00000526357 IGSF3O75054 1194 aa10.38□□□□□ -0.75
CTNND1-213ENST00000526357 TNNI1P19237 187 aa10.38□□□□□ -0.75
CTNND1-213ENST00000526357 PRPSAP1Q14558 356 aa10.38□□□□□ -0.75
CTNND1-213ENST00000526357 HDAC11Q96DB2 347 aa10.38□□□□□ -0.75
CTNND1-213ENST00000526357 MSH6P52701 1360 aa10.38□□□□□ -0.75
CTNND1-213ENST00000526357 TRIM37O94972 964 aa10.38□□□□□ -0.75
CTNND1-213ENST00000526357 ZNF75DP51815 510 aa10.38□□□□□ -0.75
CTNND1-213ENST00000526357 CABP7Q86V35 215 aa10.38□□□□□ -0.75
CTNND1-213ENST00000526357 TAB2Q9NYJ8 693 aa10.38□□□□□ -0.75
CTNND1-213ENST00000526357 LMNB1P20700 586 aa10.38□□□□□ -0.75
CTNND1-213ENST00000526357 ADCY8P40145 1251 aa10.38□□□□□ -0.75
CTNND1-213ENST00000526357 RAB44Q7Z6P3 723 aaPredicted RBP10.38□□□□□ -0.75
CTNND1-213ENST00000526357 CCDC51Q96ER9 411 aa10.38□□□□□ -0.75
CTNND1-213ENST00000526357 DRC3Q9H069 523 aa10.38□□□□□ -0.75
CTNND1-213ENST00000526357 TRIM68Q6AZZ1 485 aa10.37□□□□□ -0.75
CTNND1-213ENST00000526357 TACO1Q9BSH4 297 aaKnown RBP10.37□□□□□ -0.75
CTNND1-213ENST00000526357 SPC25Q9HBM1 224 aa10.37□□□□□ -0.75
CTNND1-213ENST00000526357 MAPK8IP1Q9UQF2 711 aa10.37□□□□□ -0.75
CTNND1-213ENST00000526357 KDM3AQ9Y4C1 1321 aa10.37□□□□□ -0.75
CTNND1-213ENST00000526357 ELF2Q15723 593 aa10.37□□□□□ -0.75
CTNND1-213ENST00000526357 NLRX1Q86UT6 975 aa10.37□□□□□ -0.75
CTNND1-213ENST00000526357 HELBQ8NG08 1087 aaPredicted RBP10.37□□□□□ -0.75
CTNND1-213ENST00000526357 NT5C3AQ9H0P0 336 aa10.37□□□□□ -0.75
CTNND1-213ENST00000526357 MRPL46Q9H2W6 279 aaKnown RBP10.37□□□□□ -0.75
CTNND1-213ENST00000526357 RTEL1Q9NZ71 1219 aa10.37□□□□□ -0.75
CTNND1-213ENST00000526357 RIPOR2Q9Y4F9 1068 aa10.37□□□□□ -0.75
CTNND1-213ENST00000526357 V9GY48 417 aaPredicted RBP10.37□□□□□ -0.75
CTNND1-213ENST00000526357 B4E1Z4 1266 aa10.37□□□□□ -0.75
CTNND1-213ENST00000526357 CAPN9O14815 690 aa10.37□□□□□ -0.75
CTNND1-213ENST00000526357 N4BP1O75113 896 aaKnown RBP10.37□□□□□ -0.75
CTNND1-213ENST00000526357 SERPINB6P35237 376 aa10.37□□□□□ -0.75
CTNND1-213ENST00000526357 GCKP35557 465 aa10.37□□□□□ -0.75
CTNND1-213ENST00000526357 SLC39A6Q13433 755 aa10.37□□□□□ -0.75
CTNND1-213ENST00000526357 CCDC124Q96CT7 223 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms