RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 CNNM2Q9H8M5 875 aa14.66□□□□□ -0.06
CCS-202ENST00000525435 ANO2Q9NQ90 1003 aa14.66□□□□□ -0.06
CCS-202ENST00000525435 SIPA1L1O43166 1804 aa14.66□□□□□ -0.06
CCS-202ENST00000525435 BAZ2AQ9UIF9 1905 aaKnown RBP14.65□□□□□ -0.06
CCS-202ENST00000525435 IGKV6D-41A0A0C4DH26 115 aa14.65□□□□□ -0.06
CCS-202ENST00000525435 PRDM1O75626 825 aa14.65□□□□□ -0.06
CCS-202ENST00000525435 TSPY3P0CV98 308 aa14.65□□□□□ -0.06
CCS-202ENST00000525435 TSPY8P0CW00 308 aa14.65□□□□□ -0.06
CCS-202ENST00000525435 HAND2P61296 217 aa14.65□□□□□ -0.06
CCS-202ENST00000525435 TFAP4Q01664 338 aa14.65□□□□□ -0.06
CCS-202ENST00000525435 MOGSQ13724 837 aa14.65□□□□□ -0.06
CCS-202ENST00000525435 USP17L2Q6R6M4 530 aa14.65□□□□□ -0.06
CCS-202ENST00000525435 SIAH1Q8IUQ4 282 aa14.65□□□□□ -0.06
CCS-202ENST00000525435 ESR2Q92731 530 aa14.65□□□□□ -0.06
CCS-202ENST00000525435 MKL1Q969V6 931 aa14.65□□□□□ -0.06
CCS-202ENST00000525435 C12orf42Q96LP6 360 aa14.65□□□□□ -0.06
CCS-202ENST00000525435 KRT23Q9C075 422 aa14.65□□□□□ -0.06
CCS-202ENST00000525435 ARHGEF10LQ9HCE6 1279 aa14.65□□□□□ -0.06
CCS-202ENST00000525435 TCP11L1Q9NUJ3 509 aa14.65□□□□□ -0.06
CCS-202ENST00000525435 RNF186Q9NXI6 227 aa14.65□□□□□ -0.06
CCS-202ENST00000525435 TMOD4Q9NZQ9 345 aa14.65□□□□□ -0.06
CCS-202ENST00000525435 NYAP2Q9P242 653 aa14.65□□□□□ -0.06
CCS-202ENST00000525435 RBM8AQ9Y5S9 174 aaKnown RBP14.65□□□□□ -0.06
CCS-202ENST00000525435 PLIN4Q96Q06 1357 aa14.64□□□□□ -0.07
CCS-202ENST00000525435 TSPY2A6NKD2 308 aa14.64□□□□□ -0.07
CCS-202ENST00000525435 RANBP6O60518 1105 aaKnown RBP14.64□□□□□ -0.07
CCS-202ENST00000525435 ICA1Q05084 483 aa14.64□□□□□ -0.07
CCS-202ENST00000525435 PABPC4Q13310 644 aaKnown RBP eCLIP14.64□□□□□ -0.072e-7■■■□□ 18
CCS-202ENST00000525435 NECTIN1Q15223 517 aa14.64□□□□□ -0.07
CCS-202ENST00000525435 SHROOM1Q2M3G4 852 aaPredicted RBP14.64□□□□□ -0.07
CCS-202ENST00000525435 CCDC178Q5BJE1 867 aa14.64□□□□□ -0.07
CCS-202ENST00000525435 RNF20Q5VTR2 975 aa14.64□□□□□ -0.07
CCS-202ENST00000525435 STK11IPQ8N1F8 1099 aa14.64□□□□□ -0.07
CCS-202ENST00000525435 NBPF3Q9H094 633 aa14.64□□□□□ -0.07
CCS-202ENST00000525435 MTMR4Q9NYA4 1195 aa14.64□□□□□ -0.07
CCS-202ENST00000525435 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.64□□□□□ -0.07
CCS-202ENST00000525435 TMX2Q9Y320 296 aa14.64□□□□□ -0.07
CCS-202ENST00000525435 BTBD19C9JJ37 291 aa14.63□□□□□ -0.07
CCS-202ENST00000525435 IGF2BP3O00425 579 aaKnown RBP eCLIP14.63□□□□□ -0.07
CCS-202ENST00000525435 TTLL1O95922 423 aa14.63□□□□□ -0.07
CCS-202ENST00000525435 CYP21A2P08686 494 aa14.63□□□□□ -0.07
CCS-202ENST00000525435 EEF2P13639 858 aaKnown RBP14.63□□□□□ -0.07
CCS-202ENST00000525435 HOXA7P31268 230 aaPredicted RBP14.63□□□□□ -0.07
CCS-202ENST00000525435 NOVP48745 357 aa14.63□□□□□ -0.07
CCS-202ENST00000525435 TRDNQ13061 729 aa14.63□□□□□ -0.07
CCS-202ENST00000525435 MTMR2Q13614 643 aa14.63□□□□□ -0.07
CCS-202ENST00000525435 NOM1Q5C9Z4 860 aaKnown RBP14.63□□□□□ -0.07
CCS-202ENST00000525435 CCDC84Q86UT8 332 aaPredicted RBP14.63□□□□□ -0.07
CCS-202ENST00000525435 TBC1D10CQ8IV04 446 aa14.63□□□□□ -0.07
CCS-202ENST00000525435 LPAR1Q92633 364 aa14.63□□□□□ -0.07
CCS-202ENST00000525435 TTC14Q96N46 770 aa14.63□□□□□ -0.07
CCS-202ENST00000525435 FEZ1Q99689 392 aa14.63□□□□□ -0.07
CCS-202ENST00000525435 INCENPQ9NQS7 918 aa14.63□□□□□ -0.07
CCS-202ENST00000525435 EMILIN3Q9NT22 766 aa14.63□□□□□ -0.07
CCS-202ENST00000525435 AGTPBP1Q9UPW5 1226 aa14.63□□□□□ -0.07
CCS-202ENST00000525435 TACC3Q9Y6A5 838 aa14.63□□□□□ -0.07
CCS-202ENST00000525435 OTOFQ9HC10 1997 aa14.62□□□□□ -0.07
CCS-202ENST00000525435 TRPA1O75762 1119 aa14.62□□□□□ -0.07
CCS-202ENST00000525435 HMGCS2P54868 508 aa14.62□□□□□ -0.07
CCS-202ENST00000525435 TSGA10IPQ3SY00 556 aa14.62□□□□□ -0.07
CCS-202ENST00000525435 FAM47AQ5JRC9 791 aa14.62□□□□□ -0.07
CCS-202ENST00000525435 GPAT2Q6NUI2 795 aa14.62□□□□□ -0.07
CCS-202ENST00000525435 FAM43AQ8N2R8 423 aa14.62□□□□□ -0.07
CCS-202ENST00000525435 ACER1Q8TDN7 264 aa14.62□□□□□ -0.07
CCS-202ENST00000525435 TOMM22Q9NS69 142 aa14.62□□□□□ -0.07
CCS-202ENST00000525435 THSD7BQ9C0I4 1608 aa14.62□□□□□ -0.07
CCS-202ENST00000525435 A0A1W2PRG0 241 aa14.61□□□□□ -0.07
CCS-202ENST00000525435 PDHXO00330 501 aa14.61□□□□□ -0.07
CCS-202ENST00000525435 RRP12Q5JTH9 1297 aaKnown RBP14.61□□□□□ -0.07
CCS-202ENST00000525435 GADL1Q6ZQY3 521 aa14.61□□□□□ -0.07
CCS-202ENST00000525435 IQCA1Q86XH1 822 aa14.61□□□□□ -0.07
CCS-202ENST00000525435 CEP95Q96GE4 821 aa14.61□□□□□ -0.07
CCS-202ENST00000525435 VCPKMTQ9H867 229 aa14.61□□□□□ -0.07
CCS-202ENST00000525435 ZFYVE28Q9HCC9 887 aa14.61□□□□□ -0.07
CCS-202ENST00000525435 GOPCQ9HD26 462 aa14.61□□□□□ -0.07
CCS-202ENST00000525435 IL17RBQ9NRM6 502 aa14.61□□□□□ -0.07
CCS-202ENST00000525435 PNMA3Q9UL41 463 aa14.61□□□□□ -0.07
CCS-202ENST00000525435 DOCK1Q14185 1865 aa14.61□□□□□ -0.07
CCS-202ENST00000525435 E7EWF7 191 aa14.6□□□□□ -0.07
CCS-202ENST00000525435 SLC27A2O14975 620 aa14.6□□□□□ -0.07
CCS-202ENST00000525435 HSPA1AP0DMV8 641 aaKnown RBP14.6□□□□□ -0.07
CCS-202ENST00000525435 HSPA1BP0DMV9 641 aaKnown RBP14.6□□□□□ -0.07
CCS-202ENST00000525435 ZKSCAN1P17029 563 aaPredicted RBP14.6□□□□□ -0.07
CCS-202ENST00000525435 CTCFP49711 727 aaPredicted RBP14.6□□□□□ -0.07
CCS-202ENST00000525435 CREB3L3Q68CJ9 461 aa14.6□□□□□ -0.07
CCS-202ENST00000525435 DGKHQ86XP1 1220 aa14.6□□□□□ -0.07
CCS-202ENST00000525435 NCOA7Q8NI08 942 aa14.6□□□□□ -0.07
CCS-202ENST00000525435 ANKS1AQ92625 1134 aa14.6□□□□□ -0.07
CCS-202ENST00000525435 KCNB2Q92953 911 aa14.6□□□□□ -0.07
CCS-202ENST00000525435 PARK7Q99497 189 aaKnown RBP14.6□□□□□ -0.07
CCS-202ENST00000525435 MTA3Q9BTC8 594 aa14.6□□□□□ -0.07
CCS-202ENST00000525435 ZSWIM5Q9P217 1185 aa14.6□□□□□ -0.07
CCS-202ENST00000525435 CLIP2Q9UDT6 1046 aa14.6□□□□□ -0.07
CCS-202ENST00000525435 USP17L15C9J2P7 530 aa14.59□□□□□ -0.07
CCS-202ENST00000525435 USP17L13C9JLJ4 530 aa14.59□□□□□ -0.07
CCS-202ENST00000525435 USP17L11C9JVI0 530 aa14.59□□□□□ -0.07
CCS-202ENST00000525435 USP17L18D6R9N7 530 aa14.59□□□□□ -0.07
CCS-202ENST00000525435 USP17L22D6RA61 530 aa14.59□□□□□ -0.07
CCS-202ENST00000525435 USP17L17D6RBQ6 530 aa14.59□□□□□ -0.07
CCS-202ENST00000525435 USP17L19D6RCP7 530 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms