RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 TATDN1Q6P1N9 297 aa7.72□□□□□ -1.17
CD44-214ENST00000525211 CHST3Q7LGC8 479 aa7.72□□□□□ -1.17
CD44-214ENST00000525211 TCEANC2Q96MN5 208 aa7.72□□□□□ -1.17
CD44-214ENST00000525211 WRNIP1Q96S55 665 aa7.72□□□□□ -1.17
CD44-214ENST00000525211 KIF2CQ99661 725 aa7.72□□□□□ -1.17
CD44-214ENST00000525211 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.72□□□□□ -1.17
CD44-214ENST00000525211 GBA2Q9HCG7 927 aaPredicted RBP7.72□□□□□ -1.17
CD44-214ENST00000525211 PI4KBQ9UBF8 816 aa7.72□□□□□ -1.17
CD44-214ENST00000525211 SERPINB13Q9UIV8 391 aa7.72□□□□□ -1.17
CD44-214ENST00000525211 PPP2R3BQ9Y5P8 575 aa7.72□□□□□ -1.17
CD44-214ENST00000525211 SNCAIPQ9Y6H5 919 aa7.72□□□□□ -1.17
CD44-214ENST00000525211 LAMB1P07942 1786 aa7.71□□□□□ -1.17
CD44-214ENST00000525211 A0A1W2PRG0 241 aa7.71□□□□□ -1.18
CD44-214ENST00000525211 B4E1Z4 1266 aa7.71□□□□□ -1.18
CD44-214ENST00000525211 E7EWF7 191 aa7.71□□□□□ -1.18
CD44-214ENST00000525211 TBC1D12O60347 775 aa7.71□□□□□ -1.18
CD44-214ENST00000525211 GH2P01242 217 aa7.71□□□□□ -1.18
CD44-214ENST00000525211 HSPA4P34932 840 aa7.71□□□□□ -1.18
CD44-214ENST00000525211 FSTL1Q12841 308 aa7.71□□□□□ -1.18
CD44-214ENST00000525211 SEPT2Q15019 361 aa7.71□□□□□ -1.18
CD44-214ENST00000525211 MAP3K11Q16584 847 aa7.71□□□□□ -1.18
CD44-214ENST00000525211 RRP12Q5JTH9 1297 aaKnown RBP7.71□□□□□ -1.18
CD44-214ENST00000525211 TTC6Q86TZ1 520 aa7.71□□□□□ -1.18
CD44-214ENST00000525211 FOXP4Q8IVH2 680 aaPredicted RBP7.71□□□□□ -1.18
CD44-214ENST00000525211 ACER1Q8TDN7 264 aa7.71□□□□□ -1.18
CD44-214ENST00000525211 STAG1Q8WVM7 1258 aa7.71□□□□□ -1.18
CD44-214ENST00000525211 CHMP4CQ96CF2 233 aa7.71□□□□□ -1.18
CD44-214ENST00000525211 ZKSCAN3Q9BRR0 538 aa7.71□□□□□ -1.18
CD44-214ENST00000525211 LRRC2Q9BYS8 371 aa7.71□□□□□ -1.18
CD44-214ENST00000525211 EHD4Q9H223 541 aa7.71□□□□□ -1.18
CD44-214ENST00000525211 DHX36Q9H2U1 1008 aaKnown RBP7.71□□□□□ -1.18
CD44-214ENST00000525211 ELP3Q9H9T3 547 aa7.71□□□□□ -1.18
CD44-214ENST00000525211 IL17RBQ9NRM6 502 aa7.71□□□□□ -1.18
CD44-214ENST00000525211 ARPP21Q9UBL0 812 aaPredicted RBP7.71□□□□□ -1.18
CD44-214ENST00000525211 ZMYM6O95789 1325 aa7.71□□□□□ -1.18
CD44-214ENST00000525211 TRPM7Q96QT4 1865 aa7.7□□□□□ -1.18
CD44-214ENST00000525211 IGKV6D-41A0A0C4DH26 115 aa7.7□□□□□ -1.18
CD44-214ENST00000525211 FAM155AB1AL88 458 aaPredicted RBP7.7□□□□□ -1.18
CD44-214ENST00000525211 ZNF213O14771 459 aa7.7□□□□□ -1.18
CD44-214ENST00000525211 DTNBO60941 627 aa7.7□□□□□ -1.18
CD44-214ENST00000525211 ZMYND10O75800 440 aa7.7□□□□□ -1.18
CD44-214ENST00000525211 SLC34A2O95436 690 aa7.7□□□□□ -1.18
CD44-214ENST00000525211 HLA-DOAP06340 250 aa7.7□□□□□ -1.18
CD44-214ENST00000525211 CAP2P40123 477 aa7.7□□□□□ -1.18
CD44-214ENST00000525211 TTLL12Q14166 644 aaPredicted RBP7.7□□□□□ -1.18
CD44-214ENST00000525211 SUPT20HL1Q3ZLR7 823 aa7.7□□□□□ -1.18
CD44-214ENST00000525211 AKNAD1Q5T1N1 836 aa7.7□□□□□ -1.18
CD44-214ENST00000525211 KIAA1211Q6ZU35 1233 aa7.7□□□□□ -1.18
CD44-214ENST00000525211 SAPCD2Q86UD0 394 aa7.7□□□□□ -1.18
CD44-214ENST00000525211 CERS3Q8IU89 383 aa7.7□□□□□ -1.18
CD44-214ENST00000525211 MB21D2Q8IYB1 491 aaPredicted RBP7.7□□□□□ -1.18
CD44-214ENST00000525211 CRACR2BQ8N4Y2 399 aaPredicted RBP7.7□□□□□ -1.18
CD44-214ENST00000525211 OXER1Q8TDS5 423 aa7.7□□□□□ -1.18
CD44-214ENST00000525211 ZNF341Q9BYN7 854 aa7.7□□□□□ -1.18
CD44-214ENST00000525211 NACAP1Q9BZK3 213 aa7.7□□□□□ -1.18
CD44-214ENST00000525211 ZSWIM5Q9P217 1185 aa7.7□□□□□ -1.18
CD44-214ENST00000525211 TLL2Q9Y6L7 1015 aa7.7□□□□□ -1.18
CD44-214ENST00000525211 LAMA4Q16363 1823 aa7.7□□□□□ -1.18
CD44-214ENST00000525211 PHIPQ8WWQ0 1821 aa7.69□□□□□ -1.18
CD44-214ENST00000525211 ORC4O43929 436 aa7.69□□□□□ -1.18
CD44-214ENST00000525211 KDM4AO75164 1064 aa7.69□□□□□ -1.18
CD44-214ENST00000525211 PTPRAP18433 802 aa7.69□□□□□ -1.18
CD44-214ENST00000525211 ECE1P42892 770 aa7.69□□□□□ -1.18
CD44-214ENST00000525211 HUNKP57058 714 aa7.69□□□□□ -1.18
CD44-214ENST00000525211 TFAP4Q01664 338 aa7.69□□□□□ -1.18
CD44-214ENST00000525211 MOGSQ13724 837 aa7.69□□□□□ -1.18
CD44-214ENST00000525211 CERKLQ49MI3 558 aaPredicted RBP7.69□□□□□ -1.18
CD44-214ENST00000525211 NOL9Q5SY16 702 aaKnown RBP7.69□□□□□ -1.18
CD44-214ENST00000525211 RCSD1Q6JBY9 416 aa7.69□□□□□ -1.18
CD44-214ENST00000525211 CYP4F22Q6NT55 531 aa7.69□□□□□ -1.18
CD44-214ENST00000525211 CASC1Q6TDU7 716 aa7.69□□□□□ -1.18
CD44-214ENST00000525211 RASAL3Q86YV0 1011 aa7.69□□□□□ -1.18
CD44-214ENST00000525211 SLC24A3Q9HC58 644 aa7.69□□□□□ -1.18
CD44-214ENST00000525211 HERC5Q9UII4 1024 aaKnown RBP7.69□□□□□ -1.18
CD44-214ENST00000525211 ZBTB21Q9ULJ3 1066 aa7.69□□□□□ -1.18
CD44-214ENST00000525211 GREB1LQ9C091 1923 aaPredicted RBP7.69□□□□□ -1.18
CD44-214ENST00000525211 TMEM88BA6NKF7 163 aa7.68□□□□□ -1.18
CD44-214ENST00000525211 MPHOSPH10O00566 681 aaKnown RBP7.68□□□□□ -1.18
CD44-214ENST00000525211 RANBP6O60518 1105 aaKnown RBP7.68□□□□□ -1.18
CD44-214ENST00000525211 AOC2O75106 756 aa7.68□□□□□ -1.18
CD44-214ENST00000525211 REC8O95072 547 aa7.68□□□□□ -1.18
CD44-214ENST00000525211 APLP1P51693 650 aa7.68□□□□□ -1.18
CD44-214ENST00000525211 EXOSC10Q01780 885 aaKnown RBP7.68□□□□□ -1.18
CD44-214ENST00000525211 SEC23AQ15436 765 aa7.68□□□□□ -1.18
CD44-214ENST00000525211 IMMTQ16891 758 aaKnown RBP7.68□□□□□ -1.18
CD44-214ENST00000525211 ABCB5Q2M3G0 1257 aa7.68□□□□□ -1.18
CD44-214ENST00000525211 TSGA10IPQ3SY00 556 aa7.68□□□□□ -1.18
CD44-214ENST00000525211 DCAF15Q66K64 600 aa7.68□□□□□ -1.18
CD44-214ENST00000525211 ARMC9Q7Z3E5 817 aa7.68□□□□□ -1.18
CD44-214ENST00000525211 RAB11FIP4Q86YS3 637 aa7.68□□□□□ -1.18
CD44-214ENST00000525211 GPIHBP1Q8IV16 184 aa7.68□□□□□ -1.18
CD44-214ENST00000525211 SCYL3Q8IZE3 742 aa7.68□□□□□ -1.18
CD44-214ENST00000525211 C2orf69Q8N8R5 385 aa7.68□□□□□ -1.18
CD44-214ENST00000525211 NEDD1Q8NHV4 660 aa7.68□□□□□ -1.18
CD44-214ENST00000525211 OTUD5Q96G74 571 aa7.68□□□□□ -1.18
CD44-214ENST00000525211 CEP95Q96GE4 821 aa7.68□□□□□ -1.18
CD44-214ENST00000525211 WNK4Q96J92 1243 aa7.68□□□□□ -1.18
CD44-214ENST00000525211 UPF3BQ9BZI7 483 aaKnown RBP7.68□□□□□ -1.18
CD44-214ENST00000525211 MKNK2Q9HBH9 465 aa7.68□□□□□ -1.18
CD44-214ENST00000525211 TOMM22Q9NS69 142 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms