RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 GALEQ14376 348 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 MTFR1Q15390 333 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 DHCR24Q15392 516 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 RTN1Q16799 776 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 KIAA0319Q5VV43 1072 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 MRM1Q6IN84 353 aaKnown RBP5.38□□□□□ -1.55
CD44-213ENST00000525209 XKR5Q6UX68 686 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 C6orf15Q6UXA7 325 aaPredicted RBP5.38□□□□□ -1.55
CD44-213ENST00000525209 C1orf122Q6ZSJ8 110 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 SV2BQ7L1I2 683 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 PNMA8AQ86V59 439 aaPredicted RBP5.38□□□□□ -1.55
CD44-213ENST00000525209 BPHLQ86WA6 291 aaPredicted RBP5.38□□□□□ -1.55
CD44-213ENST00000525209 SKAP1Q86WV1 359 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 FAM186BQ8IYM0 893 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 TRIM22Q8IYM9 498 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 PPM1KQ8N3J5 372 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 MPNDQ8N594 471 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 CNTD1Q8N815 330 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 RBBP8NLQ8NC74 664 aaPredicted RBP5.38□□□□□ -1.55
CD44-213ENST00000525209 GIMAP8Q8ND71 665 aaPredicted RBP5.38□□□□□ -1.55
CD44-213ENST00000525209 SLC7A3Q8WY07 619 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 ITPKCQ96DU7 683 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 NGLY1Q96IV0 654 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 CDHR1Q96JP9 859 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 TMEM87BQ96K49 555 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 CDK15Q96Q40 435 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 KLF16Q9BXK1 252 aaPredicted RBP5.38□□□□□ -1.55
CD44-213ENST00000525209 SCRIBQ14160 1630 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 F5H423 210 aaPredicted RBP5.37□□□□□ -1.55
CD44-213ENST00000525209 K7ENM7 598 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 ERC2O15083 957 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 ZIC2O95409 532 aaPredicted RBP5.37□□□□□ -1.55
CD44-213ENST00000525209 NPTXRO95502 500 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 SDSP20132 328 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 AK2P54819 239 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 NEXNQ0ZGT2 675 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 SEPT2Q15019 361 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 GLIPR1L2Q4G1C9 344 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 XRRA1Q6P2D8 792 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 EPM2AIP1Q7L775 607 aaPredicted RBP5.37□□□□□ -1.55
CD44-213ENST00000525209 SRLQ86TD4 932 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 LSRQ86X29 649 aaPredicted RBP5.37□□□□□ -1.55
CD44-213ENST00000525209 TREML1Q86YW5 311 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 GALNT12Q8IXK2 581 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 AHI1Q8N157 1196 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 NDUFAF2Q8N183 169 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 PARD3BQ8TEW8 1205 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 NELL1Q92832 810 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 KISS1RQ969F8 398 aaPredicted RBP5.37□□□□□ -1.55
CD44-213ENST00000525209 PPM1MQ96MI6 270 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 FMNL2Q96PY5 1086 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 NELL2Q99435 816 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 DHRS4Q9BTZ2 278 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 OSBPL5Q9H0X9 879 aaPredicted RBP5.37□□□□□ -1.55
CD44-213ENST00000525209 ETNK1Q9HBU6 452 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 SH3GLB2Q9NR46 395 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 RASSF1Q9NS23 344 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 KLK14Q9P0G3 267 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 ANKIB1Q9P2G1 1089 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 ABCF2Q9UG63 623 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 ODF2LQ9ULJ1 636 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 PPM1HQ9ULR3 514 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 ZNRF3Q9ULT6 936 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 SYNPO2Q9UMS6 1093 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 SH3BP1Q9Y3L3 701 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 PCDHGB3Q9Y5G1 929 aa5.37□□□□□ -1.55
CD44-213ENST00000525209 FRMPD2Q68DX3 1309 aaPredicted RBP5.37□□□□□ -1.55
CD44-213ENST00000525209 FAM170AA1A519 330 aa5.36□□□□□ -1.55
CD44-213ENST00000525209 VAMP4O75379 141 aa5.36□□□□□ -1.55
CD44-213ENST00000525209 IMPDH2P12268 514 aa5.36□□□□□ -1.55
CD44-213ENST00000525209 FSHRP23945 695 aa5.36□□□□□ -1.55
CD44-213ENST00000525209 ZNF165P49910 485 aa5.36□□□□□ -1.55
CD44-213ENST00000525209 HIRAP54198 1017 aaPredicted RBP5.36□□□□□ -1.55
CD44-213ENST00000525209 ERVK-9P63128 1117 aa5.36□□□□□ -1.55
CD44-213ENST00000525209 WASHC5Q12768 1159 aa5.36□□□□□ -1.55
CD44-213ENST00000525209 GTF2H3Q13889 308 aa5.36□□□□□ -1.55
CD44-213ENST00000525209 GJC2Q5T442 439 aaPredicted RBP5.36□□□□□ -1.55
CD44-213ENST00000525209 C6orf118Q5T5N4 469 aa5.36□□□□□ -1.55
CD44-213ENST00000525209 HGSNATQ68CP4 663 aa5.36□□□□□ -1.55
CD44-213ENST00000525209 MRPL14Q6P1L8 145 aaKnown RBP5.36□□□□□ -1.55
CD44-213ENST00000525209 LDHAL6AQ6ZMR3 332 aa5.36□□□□□ -1.55
CD44-213ENST00000525209 OTOP3Q7RTS5 596 aa5.36□□□□□ -1.55
CD44-213ENST00000525209 NLRP8Q86W28 1048 aa5.36□□□□□ -1.55
CD44-213ENST00000525209 FCHSD1Q86WN1 690 aa5.36□□□□□ -1.55
CD44-213ENST00000525209 ALDH16A1Q8IZ83 802 aa5.36□□□□□ -1.55
CD44-213ENST00000525209 LRRC47Q8N1G4 583 aaKnown RBP5.36□□□□□ -1.55
CD44-213ENST00000525209 C19orf47Q8N9M1 422 aaKnown RBP5.36□□□□□ -1.55
CD44-213ENST00000525209 GLIS3Q8NEA6 775 aa5.36□□□□□ -1.55
CD44-213ENST00000525209 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.36□□□□□ -1.55
CD44-213ENST00000525209 POF1BQ8WVV4 589 aa5.36□□□□□ -1.55
CD44-213ENST00000525209 RPGRQ92834 1020 aaKnown RBP5.36□□□□□ -1.55
CD44-213ENST00000525209 PLD4Q96BZ4 506 aa5.36□□□□□ -1.55
CD44-213ENST00000525209 CLIP3Q96DZ5 547 aa5.36□□□□□ -1.55
CD44-213ENST00000525209 AGBL1Q96MI9 1066 aa5.36□□□□□ -1.55
CD44-213ENST00000525209 MYD88Q99836 296 aa5.36□□□□□ -1.55
CD44-213ENST00000525209 EIF2AK1Q9BQI3 630 aaKnown RBP5.36□□□□□ -1.55
CD44-213ENST00000525209 C1QTNF2Q9BXJ5 285 aa5.36□□□□□ -1.55
CD44-213ENST00000525209 OSBPL3Q9H4L5 887 aa5.36□□□□□ -1.55
CD44-213ENST00000525209 ESF1Q9H501 851 aaKnown RBP5.36□□□□□ -1.55
CD44-213ENST00000525209 PPP4R2Q9NY27 417 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms