RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 STAP2Q9UGK3 403 aa20.86■□□□□ 0.93
TSKU-202ENST00000525167 DDX60LQ5H9U9 1706 aaKnown RBP20.86■□□□□ 0.93
TSKU-202ENST00000525167 GLRX3O76003 335 aaKnown RBP20.85■□□□□ 0.93
TSKU-202ENST00000525167 HNRNPUQ00839 825 aaKnown RBP eCLIP20.85■□□□□ 0.93
TSKU-202ENST00000525167 TTF1Q15361 905 aaPredicted RBP20.85■□□□□ 0.93
TSKU-202ENST00000525167 Q3C1V9 767 aa20.85■□□□□ 0.93
TSKU-202ENST00000525167 CERKLQ49MI3 558 aaPredicted RBP20.85■□□□□ 0.93
TSKU-202ENST00000525167 LBX2Q6XYB7 198 aa20.85■□□□□ 0.93
TSKU-202ENST00000525167 C7orf61Q8IZ16 206 aa20.85■□□□□ 0.93
TSKU-202ENST00000525167 GDF15Q99988 308 aa20.85■□□□□ 0.93
TSKU-202ENST00000525167 PEX10O60683 326 aa20.84■□□□□ 0.93
TSKU-202ENST00000525167 CACNB2Q08289 660 aaPredicted RBP20.84■□□□□ 0.93
TSKU-202ENST00000525167 ABCB5Q2M3G0 1257 aa20.84■□□□□ 0.93
TSKU-202ENST00000525167 AACSQ86V21 672 aa20.84■□□□□ 0.93
TSKU-202ENST00000525167 ANTXR1Q9H6X2 564 aa20.84■□□□□ 0.93
TSKU-202ENST00000525167 CABP5Q9NP86 173 aa20.84■□□□□ 0.93
TSKU-202ENST00000525167 MAP2K5Q13163 448 aa20.83■□□□□ 0.93
TSKU-202ENST00000525167 RAB3GAP1Q15042 981 aa20.83■□□□□ 0.93
TSKU-202ENST00000525167 POTEEQ6S8J3 1075 aa20.83■□□□□ 0.93
TSKU-202ENST00000525167 CATSPERGQ6ZRH7 1159 aa20.83■□□□□ 0.93
TSKU-202ENST00000525167 RIOK1Q9BRS2 568 aaKnown RBP20.83■□□□□ 0.93
TSKU-202ENST00000525167 CWC22Q9HCG8 908 aaKnown RBP20.83■□□□□ 0.93
TSKU-202ENST00000525167 EXOC6BQ9Y2D4 811 aa20.83■□□□□ 0.93
TSKU-202ENST00000525167 VCAM1P19320 739 aa20.82■□□□□ 0.92
TSKU-202ENST00000525167 GPR153Q6NV75 609 aa20.82■□□□□ 0.92
TSKU-202ENST00000525167 NDUFB9Q9Y6M9 179 aa20.82■□□□□ 0.92
TSKU-202ENST00000525167 LAMA3Q16787 3333 aa20.81■□□□□ 0.92
TSKU-202ENST00000525167 MAGEB6P1A0A0J9YX57 407 aa20.81■□□□□ 0.92
TSKU-202ENST00000525167 SLC15A5A6NIM6 579 aa20.81■□□□□ 0.92
TSKU-202ENST00000525167 CNMDO75829 334 aa20.81■□□□□ 0.92
TSKU-202ENST00000525167 COL6A1P12109 1028 aa20.81■□□□□ 0.92
TSKU-202ENST00000525167 SHMT1P34896 483 aa20.81■□□□□ 0.92
TSKU-202ENST00000525167 ZYXQ15942 572 aaKnown RBP20.81■□□□□ 0.92
TSKU-202ENST00000525167 LHX8Q68G74 356 aa20.81■□□□□ 0.92
TSKU-202ENST00000525167 PFASO15067 1338 aa20.8■□□□□ 0.92
TSKU-202ENST00000525167 MS4A1P11836 297 aa20.8■□□□□ 0.92
TSKU-202ENST00000525167 PLCD1P51178 756 aa20.8■□□□□ 0.92
TSKU-202ENST00000525167 GABPAQ06546 454 aa20.8■□□□□ 0.92
TSKU-202ENST00000525167 CCL14Q16627 93 aa20.8■□□□□ 0.92
TSKU-202ENST00000525167 RHPN1Q8TCX5 695 aa20.8■□□□□ 0.92
TSKU-202ENST00000525167 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.8■□□□□ 0.92
TSKU-202ENST00000525167 EDC3Q96F86 508 aaKnown RBP20.8■□□□□ 0.92
TSKU-202ENST00000525167 CRNKL1Q9BZJ0 848 aaKnown RBP20.8■□□□□ 0.92
TSKU-202ENST00000525167 ZMYND8Q9ULU4 1186 aaPredicted RBP20.8■□□□□ 0.92
TSKU-202ENST00000525167 SOX1O00570 391 aaPredicted RBP20.79■□□□□ 0.92
TSKU-202ENST00000525167 POLR3DP05423 398 aaPredicted RBP20.79■□□□□ 0.92
TSKU-202ENST00000525167 HOXC6P09630 235 aa20.79■□□□□ 0.92
TSKU-202ENST00000525167 PTPREP23469 700 aa20.79■□□□□ 0.92
TSKU-202ENST00000525167 CCND3P30281 292 aaPredicted RBP20.79■□□□□ 0.92
TSKU-202ENST00000525167 SLC9C2Q5TAH2 1124 aa20.79■□□□□ 0.92
TSKU-202ENST00000525167 MFSD14CQ5VZR4 134 aa20.79■□□□□ 0.92
TSKU-202ENST00000525167 CLASRPQ8N2M8 674 aaKnown RBP20.79■□□□□ 0.92
TSKU-202ENST00000525167 ACER1Q8TDN7 264 aa20.79■□□□□ 0.92
TSKU-202ENST00000525167 IVNS1ABPQ9Y6Y0 642 aa20.79■□□□□ 0.92
TSKU-202ENST00000525167 NAV1Q8NEY1 1877 aa20.79■□□□□ 0.92
TSKU-202ENST00000525167 MSCO60682 206 aa20.78■□□□□ 0.92
TSKU-202ENST00000525167 PDE6AP16499 860 aa20.78■□□□□ 0.92
TSKU-202ENST00000525167 GRB14Q14449 540 aa20.78■□□□□ 0.92
TSKU-202ENST00000525167 KIF1BPQ96EK5 621 aa20.78■□□□□ 0.92
TSKU-202ENST00000525167 RPAP3Q9H6T3 665 aaPredicted RBP20.78■□□□□ 0.92
TSKU-202ENST00000525167 SPDYE16A6NNV3 312 aaPredicted RBP20.77■□□□□ 0.92
TSKU-202ENST00000525167 GUCY1A2P33402 732 aa20.77■□□□□ 0.92
TSKU-202ENST00000525167 MAGEA10P43363 369 aaPredicted RBP20.77■□□□□ 0.92
TSKU-202ENST00000525167 LRIT3Q3SXY7 679 aa20.77■□□□□ 0.92
TSKU-202ENST00000525167 RPAP2Q8IXW5 612 aaPredicted RBP20.77■□□□□ 0.92
TSKU-202ENST00000525167 LRCH3Q96II8 777 aa20.77■□□□□ 0.92
TSKU-202ENST00000525167 IL1RAPL2Q9NP60 686 aa20.77■□□□□ 0.92
TSKU-202ENST00000525167 MCM9Q9NXL9 1143 aa20.77■□□□□ 0.92
TSKU-202ENST00000525167 ZBED9Q6R2W3 1325 aa20.77■□□□□ 0.91
TSKU-202ENST00000525167 SEPT2Q15019 361 aa20.76■□□□□ 0.91
TSKU-202ENST00000525167 TDHQ8IZJ6 230 aa20.76■□□□□ 0.91
TSKU-202ENST00000525167 PANK1Q8TE04 598 aa20.76■□□□□ 0.91
TSKU-202ENST00000525167 HOXC10Q9NYD6 342 aa20.76■□□□□ 0.91
TSKU-202ENST00000525167 BTBD7Q9P203 1132 aa20.76■□□□□ 0.91
TSKU-202ENST00000525167 SWAP70Q9UH65 585 aa20.76■□□□□ 0.91
TSKU-202ENST00000525167 HMMRO75330 724 aa20.75■□□□□ 0.91
TSKU-202ENST00000525167 SYN1P17600 705 aa20.75■□□□□ 0.91
TSKU-202ENST00000525167 COG2Q14746 738 aa20.75■□□□□ 0.91
TSKU-202ENST00000525167 WDR78Q5VTH9 848 aa20.75■□□□□ 0.91
TSKU-202ENST00000525167 ZNF236Q9UL36 1845 aa20.75■□□□□ 0.91
TSKU-202ENST00000525167 ZNF532Q9HCE3 1301 aa20.75■□□□□ 0.91
TSKU-202ENST00000525167 FRMPD3Q5JV73 1810 aa20.74■□□□□ 0.91
TSKU-202ENST00000525167 TCRBV5S4A2TA0A5A2 114 aa20.74■□□□□ 0.91
TSKU-202ENST00000525167 STRNO43815 780 aa20.74■□□□□ 0.91
TSKU-202ENST00000525167 IFIT2P09913 472 aaKnown RBP20.74■□□□□ 0.91
TSKU-202ENST00000525167 ATP2B2Q01814 1243 aa20.74■□□□□ 0.91
TSKU-202ENST00000525167 TMEM179Q6ZVK1 233 aa20.74■□□□□ 0.91
TSKU-202ENST00000525167 MB21D1Q8N884 522 aa20.74■□□□□ 0.91
TSKU-202ENST00000525167 DCP1AQ9NPI6 582 aaPredicted RBP20.74■□□□□ 0.91
TSKU-202ENST00000525167 FLRT1Q9NZU1 646 aa20.74■□□□□ 0.91
TSKU-202ENST00000525167 DDX20Q9UHI6 824 aaKnown RBP20.74■□□□□ 0.91
TSKU-202ENST00000525167 GOLIM4O00461 696 aa20.73■□□□□ 0.91
TSKU-202ENST00000525167 RAB11FIP3O75154 756 aa20.73■□□□□ 0.91
TSKU-202ENST00000525167 IGHA2P01877 340 aa20.73■□□□□ 0.91
TSKU-202ENST00000525167 LRRC26Q2I0M4 334 aa20.73■□□□□ 0.91
TSKU-202ENST00000525167 SHCBP1Q8NEM2 672 aa20.73■□□□□ 0.91
TSKU-202ENST00000525167 LPAR1Q92633 364 aa20.73■□□□□ 0.91
TSKU-202ENST00000525167 UBE2OQ9C0C9 1292 aaKnown RBP20.73■□□□□ 0.91
TSKU-202ENST00000525167 DDX19BQ9UMR2 479 aa20.73■□□□□ 0.91
TSKU-202ENST00000525167 A0A1W2PRG0 241 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms