RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 USP17L2Q6R6M4 530 aa15.14■□□□□ 0.01
SMCO4-202ENST00000525141 SLC44A5Q8NCS7 719 aa15.14■□□□□ 0.01
SMCO4-202ENST00000525141 TMOD4Q9NZQ9 345 aa15.14■□□□□ 0.01
SMCO4-202ENST00000525141 TNPO2O14787 897 aaKnown RBP15.13■□□□□ 0.01
SMCO4-202ENST00000525141 ADCY3O60266 1144 aa15.13■□□□□ 0.01
SMCO4-202ENST00000525141 CENPBP07199 599 aaPredicted RBP15.13■□□□□ 0.01
SMCO4-202ENST00000525141 CCL5P13501 91 aa15.13■□□□□ 0.01
SMCO4-202ENST00000525141 ELNP15502 786 aa15.13■□□□□ 0.01
SMCO4-202ENST00000525141 HERVK_113P62684 666 aa15.13■□□□□ 0.01
SMCO4-202ENST00000525141 IRX6P78412 446 aaPredicted RBP15.13■□□□□ 0.01
SMCO4-202ENST00000525141 PABPC4Q13310 644 aaKnown RBP eCLIP15.13■□□□□ 0.01
SMCO4-202ENST00000525141 SEPT2Q15019 361 aa15.13■□□□□ 0.01
SMCO4-202ENST00000525141 OTUD7AQ8TE49 926 aaPredicted RBP15.13■□□□□ 0.01
SMCO4-202ENST00000525141 SHISA4Q96DD7 197 aa15.13■□□□□ 0.01
SMCO4-202ENST00000525141 C12orf42Q96LP6 360 aa15.13■□□□□ 0.01
SMCO4-202ENST00000525141 CNMDO75829 334 aa15.12■□□□□ 0.01
SMCO4-202ENST00000525141 RAB3GAP1Q15042 981 aa15.12■□□□□ 0.01
SMCO4-202ENST00000525141 KIAA1755Q5JYT7 1200 aa15.12■□□□□ 0.01
SMCO4-202ENST00000525141 C12orf60Q5U649 245 aa15.12■□□□□ 0.01
SMCO4-202ENST00000525141 CATSPERGQ6ZRH7 1159 aa15.12■□□□□ 0.01
SMCO4-202ENST00000525141 PXYLP1Q8TE99 480 aa15.12■□□□□ 0.01
SMCO4-202ENST00000525141 STRBPQ96SI9 672 aaKnown RBP15.12■□□□□ 0.01
SMCO4-202ENST00000525141 KIAA1683Q9H0B3 1180 aa15.12■□□□□ 0.01
SMCO4-202ENST00000525141 UNC93B1Q9H1C4 597 aa15.12■□□□□ 0.01
SMCO4-202ENST00000525141 ATP8A2Q9NTI2 1148 aa15.12■□□□□ 0.01
SMCO4-202ENST00000525141 DDX60LQ5H9U9 1706 aaKnown RBP15.12■□□□□ 0.01
SMCO4-202ENST00000525141 USP17L12C9JPN9 530 aa15.11■□□□□ 0.01
SMCO4-202ENST00000525141 USP17L21D6R901 530 aa15.11■□□□□ 0.01
SMCO4-202ENST00000525141 GJB1P08034 283 aa15.11■□□□□ 0.01
SMCO4-202ENST00000525141 ZYXQ15942 572 aaKnown RBP15.11■□□□□ 0.01
SMCO4-202ENST00000525141 PRPF38BQ5VTL8 546 aaKnown RBP15.11■□□□□ 0.01
SMCO4-202ENST00000525141 CTR9Q6PD62 1173 aa15.11■□□□□ 0.01
SMCO4-202ENST00000525141 UBE2Q1Q7Z7E8 422 aa15.11■□□□□ 0.01
SMCO4-202ENST00000525141 SMC5Q8IY18 1101 aa15.11■□□□□ 0.01
SMCO4-202ENST00000525141 SLAIN1Q8ND83 568 aa15.11■□□□□ 0.01
SMCO4-202ENST00000525141 OSBP2Q969R2 916 aa15.11■□□□□ 0.01
SMCO4-202ENST00000525141 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.11■□□□□ 0.01
SMCO4-202ENST00000525141 BAZ2AQ9UIF9 1905 aaKnown RBP15.11■□□□□ 0.01
SMCO4-202ENST00000525141 PLXNB2O15031 1838 aa15.1■□□□□ 0.01
SMCO4-202ENST00000525141 AKR1B1P15121 316 aa15.1■□□□□ 0.01
SMCO4-202ENST00000525141 GJA8P48165 433 aa15.1■□□□□ 0.01
SMCO4-202ENST00000525141 IRX3P78415 501 aaPredicted RBP15.1■□□□□ 0.01
SMCO4-202ENST00000525141 TRIM32Q13049 653 aa15.1■□□□□ 0.01
SMCO4-202ENST00000525141 KBTBD3Q8NAB2 608 aa15.1■□□□□ 0.01
SMCO4-202ENST00000525141 GPRC5AQ8NFJ5 357 aa15.1■□□□□ 0.01
SMCO4-202ENST00000525141 PI4K2BQ8TCG2 481 aa15.1■□□□□ 0.01
SMCO4-202ENST00000525141 COA7Q96BR5 231 aa15.1■□□□□ 0.01
SMCO4-202ENST00000525141 RNF208Q9H0X6 261 aa15.1■□□□□ 0.01
SMCO4-202ENST00000525141 PORCNQ9H237 461 aa15.1■□□□□ 0.01
SMCO4-202ENST00000525141 CABP5Q9NP86 173 aa15.1■□□□□ 0.01
SMCO4-202ENST00000525141 BIN2Q9UBW5 565 aaPredicted RBP15.1■□□□□ 0.01
SMCO4-202ENST00000525141 SLC4A4Q9Y6R1 1079 aa15.1■□□□□ 0.01
SMCO4-202ENST00000525141 GSG1L2A8MUP6 293 aa15.09■□□□□ 0.01
SMCO4-202ENST00000525141 USP17L15C9J2P7 530 aa15.09■□□□□ 0.01
SMCO4-202ENST00000525141 USP17L13C9JLJ4 530 aa15.09■□□□□ 0.01
SMCO4-202ENST00000525141 USP17L11C9JVI0 530 aa15.09■□□□□ 0.01
SMCO4-202ENST00000525141 USP17L18D6R9N7 530 aa15.09■□□□□ 0.01
SMCO4-202ENST00000525141 USP17L22D6RA61 530 aa15.09■□□□□ 0.01
SMCO4-202ENST00000525141 USP17L17D6RBQ6 530 aa15.09■□□□□ 0.01
SMCO4-202ENST00000525141 USP17L19D6RCP7 530 aa15.09■□□□□ 0.01
SMCO4-202ENST00000525141 USP17L20D6RJB6 530 aa15.09■□□□□ 0.01
SMCO4-202ENST00000525141 IGHDP01880 384 aa15.09■□□□□ 0.01
SMCO4-202ENST00000525141 INHAP05111 366 aa15.09■□□□□ 0.01
SMCO4-202ENST00000525141 CDK8P49336 464 aa15.09■□□□□ 0.01
SMCO4-202ENST00000525141 USP17L24Q0WX57 530 aa15.09■□□□□ 0.01
SMCO4-202ENST00000525141 USP6NLQ92738 828 aa15.09■□□□□ 0.01
SMCO4-202ENST00000525141 MYH7P12883 1935 aa15.08■□□□□ 0
SMCO4-202ENST00000525141 RNF113AO15541 343 aaKnown RBP15.08■□□□□ 0
SMCO4-202ENST00000525141 SGPL1O95470 568 aa15.08■□□□□ 0
SMCO4-202ENST00000525141 VCAM1P19320 739 aa15.08■□□□□ 0
SMCO4-202ENST00000525141 ERVK-9P63128 1117 aa15.08■□□□□ 0
SMCO4-202ENST00000525141 ERVK-24P63145 666 aa15.08■□□□□ 0
SMCO4-202ENST00000525141 ANKRD45Q5TZF3 282 aa15.08■□□□□ 0
SMCO4-202ENST00000525141 ZSCAN25Q6NSZ9 544 aa15.08■□□□□ 0
SMCO4-202ENST00000525141 CLEC10AQ8IUN9 316 aa15.08■□□□□ 0
SMCO4-202ENST00000525141 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.08■□□□□ 0
SMCO4-202ENST00000525141 BTBD7Q9P203 1132 aa15.08■□□□□ 0
SMCO4-202ENST00000525141 ZBTB47Q9UFB7 747 aaPredicted RBP15.08■□□□□ 0
SMCO4-202ENST00000525141 SALL3Q9BXA9 1300 aa15.08■□□□□ 0
SMCO4-202ENST00000525141 NAV1Q8NEY1 1877 aa15.08■□□□□ 0
SMCO4-202ENST00000525141 USP14P54578 494 aa15.07■□□□□ 0
SMCO4-202ENST00000525141 UBXN2AP68543 259 aa15.07■□□□□ 0
SMCO4-202ENST00000525141 C16orf86Q6ZW13 317 aa15.07■□□□□ 0
SMCO4-202ENST00000525141 SWAP70Q9UH65 585 aa15.07■□□□□ 0
SMCO4-202ENST00000525141 M0R2C6 588 aa15.06■□□□□ 0
SMCO4-202ENST00000525141 MPHOSPH10O00566 681 aaKnown RBP15.06■□□□□ 0
SMCO4-202ENST00000525141 CYP2B6P20813 491 aa15.06■□□□□ 0
SMCO4-202ENST00000525141 SBK1Q52WX2 424 aa15.06■□□□□ 0
SMCO4-202ENST00000525141 MORN1Q5T089 497 aa15.06■□□□□ 0
SMCO4-202ENST00000525141 LBX2Q6XYB7 198 aa15.06■□□□□ 0
SMCO4-202ENST00000525141 TMEM179Q6ZVK1 233 aa15.06■□□□□ 0
SMCO4-202ENST00000525141 U2AF1L4Q8WU68 220 aaKnown RBP15.06■□□□□ 0
SMCO4-202ENST00000525141 GPATCH3Q96I76 525 aa15.06■□□□□ 0
SMCO4-202ENST00000525141 SEC62Q99442 399 aaKnown RBP15.06■□□□□ 0
SMCO4-202ENST00000525141 FEZ1Q99689 392 aa15.06■□□□□ 0
SMCO4-202ENST00000525141 PAGR1Q9BTK6 254 aa15.06■□□□□ 0
SMCO4-202ENST00000525141 CRISPLD2Q9H0B8 497 aa15.06■□□□□ 0
SMCO4-202ENST00000525141 RPAP3Q9H6T3 665 aaPredicted RBP15.06■□□□□ 0
SMCO4-202ENST00000525141 PAK6Q9NQU5 681 aaPredicted RBP15.06■□□□□ 0
SMCO4-202ENST00000525141 TAOK2Q9UL54 1235 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms