RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 BCAMP50895 628 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 ERCC6LQ2NKX8 1250 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 MNS1Q8NEH6 495 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 UBXN4Q92575 508 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 TRERF1Q96PN7 1200 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 PANX2Q96RD6 677 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 CTAGE1Q96RT6 745 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 PHF20Q9BVI0 1012 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 BRIP1Q9BX63 1249 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 RAI14Q9P0K7 980 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.47□□□□□ -0.89
CHD7-202ENST00000524602 V9GYY5 206 aaPredicted RBP9.47□□□□□ -0.89
CHD7-202ENST00000524602 TNKSO95271 1327 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 CACNA1SQ13698 1873 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 MAGEB6P1A0A0J9YX57 407 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 A0A1B0GTH6 734 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 VWA3AA6NCI4 1184 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 FOXN1O15353 648 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 FGRP09769 529 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 SLFN14P0C7P3 912 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 CYP7A1P22680 504 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 NR1I3Q14994 352 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 TC2NQ8N9U0 490 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 CSRNP2Q9H175 543 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 SCN7AQ01118 1682 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 ATP8B1O43520 1251 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 DDAH1O94760 285 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 CAMTA2O94983 1202 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 NTSR2O95665 410 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 PRR29P0C7W0 189 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 FMR1Q06787 632 aaKnown RBP eCLIP9.47□□□□□ -0.89
CHD7-202ENST00000524602 CHRNDQ07001 517 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 NR5A1Q13285 461 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 SH3RF1Q7Z6J0 888 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 CATIPQ7Z7H3 387 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 NUP133Q8WUM0 1156 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 NGLY1Q96IV0 654 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 GSDMAQ96QA5 445 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 ZSCAN10Q96SZ4 725 aaPredicted RBP9.47□□□□□ -0.89
CHD7-202ENST00000524602 ZKSCAN3Q9BRR0 538 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 CABP5Q9NP86 173 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 SEC31BQ9NQW1 1179 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 PARP3Q9Y6F1 533 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 GRIN1Q05586 938 aa9.46□□□□□ -0.89
CHD7-202ENST00000524602 SPECC1Q5M775 1068 aa9.46□□□□□ -0.89
CHD7-202ENST00000524602 SPATA1Q5VX52 437 aa9.46□□□□□ -0.89
CHD7-202ENST00000524602 LAMB1P07942 1786 aa9.46□□□□□ -0.89
CHD7-202ENST00000524602 ZNF831Q5JPB2 1677 aa9.46□□□□□ -0.9
CHD7-202ENST00000524602 COL5A3P25940 1745 aaPredicted RBP9.46□□□□□ -0.9
CHD7-202ENST00000524602 TADA3O75528 432 aa9.46□□□□□ -0.9
CHD7-202ENST00000524602 CASQ1P31415 396 aa9.46□□□□□ -0.9
CHD7-202ENST00000524602 NT5C2P49902 561 aa9.46□□□□□ -0.9
CHD7-202ENST00000524602 UBE4AQ14139 1066 aa9.46□□□□□ -0.9
CHD7-202ENST00000524602 ARHGAP29Q52LW3 1261 aa9.46□□□□□ -0.9
CHD7-202ENST00000524602 IQCA1Q86XH1 822 aa9.46□□□□□ -0.9
CHD7-202ENST00000524602 FUT2Q10981 343 aa9.46□□□□□ -0.9
CHD7-202ENST00000524602 PKN1Q16512 942 aa9.46□□□□□ -0.9
CHD7-202ENST00000524602 MIGA1Q8NAN2 632 aa9.46□□□□□ -0.9
CHD7-202ENST00000524602 OXER1Q8TDS5 423 aa9.46□□□□□ -0.9
CHD7-202ENST00000524602 ZNF446Q9NWS9 450 aa9.46□□□□□ -0.9
CHD7-202ENST00000524602 ZNF652Q9Y2D9 606 aa9.46□□□□□ -0.9
CHD7-202ENST00000524602 URI1O94763 535 aaPredicted RBP9.45□□□□□ -0.9
CHD7-202ENST00000524602 TRAPPC10P48553 1259 aa9.45□□□□□ -0.9
CHD7-202ENST00000524602 CLCN6P51797 869 aa9.45□□□□□ -0.9
CHD7-202ENST00000524602 MAP3K9P80192 1104 aa9.45□□□□□ -0.9
CHD7-202ENST00000524602 IFIT1BQ5T764 474 aaKnown RBP9.45□□□□□ -0.9
CHD7-202ENST00000524602 TAF3Q5VWG9 929 aa9.45□□□□□ -0.9
CHD7-202ENST00000524602 ENAHQ8N8S7 591 aaPredicted RBP9.45□□□□□ -0.9
CHD7-202ENST00000524602 IPO4Q8TEX9 1081 aaKnown RBP9.45□□□□□ -0.9
CHD7-202ENST00000524602 ZBTB9Q96C00 473 aa9.45□□□□□ -0.9
CHD7-202ENST00000524602 RIOK1Q9BRS2 568 aaKnown RBP9.45□□□□□ -0.9
CHD7-202ENST00000524602 PDS5AQ29RF7 1337 aaKnown RBP9.45□□□□□ -0.9
CHD7-202ENST00000524602 SYNRGQ9UMZ2 1314 aa9.45□□□□□ -0.9
CHD7-202ENST00000524602 AKR1B15C9JRZ8 316 aaPredicted RBP9.45□□□□□ -0.9
CHD7-202ENST00000524602 RGL2O15211 777 aa9.45□□□□□ -0.9
CHD7-202ENST00000524602 TERF2Q15554 542 aa9.45□□□□□ -0.9
CHD7-202ENST00000524602 PDILTQ8N807 584 aa9.45□□□□□ -0.9
CHD7-202ENST00000524602 CCDC51Q96ER9 411 aa9.45□□□□□ -0.9
CHD7-202ENST00000524602 MAST2Q6P0Q8 1798 aa9.45□□□□□ -0.9
CHD7-202ENST00000524602 CASZ1Q86V15 1759 aa9.45□□□□□ -0.9
CHD7-202ENST00000524602 ITIH6Q6UXX5 1313 aa9.44□□□□□ -0.9
CHD7-202ENST00000524602 CUL4BQ13620 913 aa9.44□□□□□ -0.9
CHD7-202ENST00000524602 TUBB2AQ13885 445 aa9.44□□□□□ -0.9
CHD7-202ENST00000524602 VPS72Q15906 364 aa9.44□□□□□ -0.9
CHD7-202ENST00000524602 CDKAL1Q5VV42 579 aa9.44□□□□□ -0.9
CHD7-202ENST00000524602 TMCO3Q6UWJ1 677 aa9.44□□□□□ -0.9
CHD7-202ENST00000524602 PAGE5Q96GU1 130 aa9.44□□□□□ -0.9
CHD7-202ENST00000524602 TUBB2BQ9BVA1 445 aa9.44□□□□□ -0.9
CHD7-202ENST00000524602 MINDY4BA8MYZ0 360 aa9.44□□□□□ -0.9
CHD7-202ENST00000524602 CCDC175P0C221 793 aa9.44□□□□□ -0.9
CHD7-202ENST00000524602 TUBB4BP68371 445 aa9.44□□□□□ -0.9
CHD7-202ENST00000524602 DPYDQ12882 1025 aa9.44□□□□□ -0.9
CHD7-202ENST00000524602 FILIP1LQ4L180 1135 aa9.44□□□□□ -0.9
CHD7-202ENST00000524602 CAVIN4Q5BKX8 364 aa9.44□□□□□ -0.9
CHD7-202ENST00000524602 CLEC4GQ6UXB4 293 aa9.44□□□□□ -0.9
CHD7-202ENST00000524602 CCDC82Q8N4S0 544 aa9.44□□□□□ -0.9
CHD7-202ENST00000524602 GPR161Q8N6U8 529 aaKnown RBP9.44□□□□□ -0.9
CHD7-202ENST00000524602 TNFRSF25Q93038 417 aa9.44□□□□□ -0.9
CHD7-202ENST00000524602 NIP7Q9Y221 180 aaKnown RBP eCLIP9.44□□□□□ -0.9
CHD7-202ENST00000524602 MRFAP1Q9Y605 127 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms