RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 DYNLL1P63167 89 aaKnown RBP18.01■□□□□ 0.47
CSTF3-204ENST00000524556 CCNA1P78396 465 aa18.01■□□□□ 0.47
CSTF3-204ENST00000524556 MFSD14CQ5VZR4 134 aa18.01■□□□□ 0.47
CSTF3-204ENST00000524556 TATDN1Q6P1N9 297 aa18.01■□□□□ 0.47
CSTF3-204ENST00000524556 PIH1D3Q9NQM4 214 aaKnown RBP18.01■□□□□ 0.47
CSTF3-204ENST00000524556 FLRT1Q9NZU1 646 aa18.01■□□□□ 0.47
CSTF3-204ENST00000524556 TNNQ9UQP3 1299 aa18.01■□□□□ 0.47
CSTF3-204ENST00000524556 SLC15A5A6NIM6 579 aa18■□□□□ 0.47
CSTF3-204ENST00000524556 POTEB2H3BUK9 544 aa18■□□□□ 0.47
CSTF3-204ENST00000524556 PTPREP23469 700 aa18■□□□□ 0.47
CSTF3-204ENST00000524556 ZAP70P43403 619 aa18■□□□□ 0.47
CSTF3-204ENST00000524556 POLA2Q14181 598 aa18■□□□□ 0.47
CSTF3-204ENST00000524556 FAM109BQ6ICB4 259 aaPredicted RBP18■□□□□ 0.47
CSTF3-204ENST00000524556 CATSPERGQ6ZRH7 1159 aa18■□□□□ 0.47
CSTF3-204ENST00000524556 SENP6Q9GZR1 1112 aaPredicted RBP18■□□□□ 0.47
CSTF3-204ENST00000524556 NDUFB9Q9Y6M9 179 aa18■□□□□ 0.47
CSTF3-204ENST00000524556 CYP7A1P22680 504 aa17.99■□□□□ 0.47
CSTF3-204ENST00000524556 USP14P54578 494 aa17.99■□□□□ 0.47
CSTF3-204ENST00000524556 ZYXQ15942 572 aaKnown RBP17.99■□□□□ 0.47
CSTF3-204ENST00000524556 FEZ1Q99689 392 aa17.99■□□□□ 0.47
CSTF3-204ENST00000524556 DDX20Q9UHI6 824 aaKnown RBP17.99■□□□□ 0.47
CSTF3-204ENST00000524556 EYSQ5T1H1 3165 aa17.99■□□□□ 0.47
CSTF3-204ENST00000524556 HOXC6P09630 235 aa17.98■□□□□ 0.47
CSTF3-204ENST00000524556 ATP2B2Q01814 1243 aa17.98■□□□□ 0.47
CSTF3-204ENST00000524556 OS9Q13438 667 aaPredicted RBP17.98■□□□□ 0.47
CSTF3-204ENST00000524556 WDR78Q5VTH9 848 aa17.98■□□□□ 0.47
CSTF3-204ENST00000524556 LBX2Q6XYB7 198 aa17.98■□□□□ 0.47
CSTF3-204ENST00000524556 LPAR1Q92633 364 aa17.98■□□□□ 0.47
CSTF3-204ENST00000524556 LBHD1Q9BQE6 289 aaPredicted RBP17.98■□□□□ 0.47
CSTF3-204ENST00000524556 KIAA1683Q9H0B3 1180 aa17.98■□□□□ 0.47
CSTF3-204ENST00000524556 EHD4Q9H223 541 aa17.98■□□□□ 0.47
CSTF3-204ENST00000524556 SERPINB13Q9UIV8 391 aa17.98■□□□□ 0.47
CSTF3-204ENST00000524556 MSCO60682 206 aa17.97■□□□□ 0.47
CSTF3-204ENST00000524556 CNGA1P29973 690 aa17.97■□□□□ 0.47
CSTF3-204ENST00000524556 USP5P45974 858 aa17.97■□□□□ 0.47
CSTF3-204ENST00000524556 ATP8B2P98198 1209 aa17.97■□□□□ 0.47
CSTF3-204ENST00000524556 GRB14Q14449 540 aa17.97■□□□□ 0.47
CSTF3-204ENST00000524556 RAB3GAP1Q15042 981 aa17.97■□□□□ 0.47
CSTF3-204ENST00000524556 CERS3Q8IU89 383 aa17.97■□□□□ 0.47
CSTF3-204ENST00000524556 ACER1Q8TDN7 264 aa17.97■□□□□ 0.47
CSTF3-204ENST00000524556 SSH3Q8TE77 659 aa17.97■□□□□ 0.47
CSTF3-204ENST00000524556 FRAT1Q92837 279 aaPredicted RBP17.97■□□□□ 0.47
CSTF3-204ENST00000524556 CLUAP1Q96AJ1 413 aa17.97■□□□□ 0.47
CSTF3-204ENST00000524556 GUCD1Q96NT3 240 aa17.97■□□□□ 0.47
CSTF3-204ENST00000524556 BTBD7Q9P203 1132 aa17.97■□□□□ 0.47
CSTF3-204ENST00000524556 RLFQ13129 1914 aa17.96■□□□□ 0.47
CSTF3-204ENST00000524556 DNM1LO00429 736 aa17.96■□□□□ 0.47
CSTF3-204ENST00000524556 SURF6O75683 361 aaKnown RBP17.96■□□□□ 0.47
CSTF3-204ENST00000524556 BCAR3O75815 825 aa17.96■□□□□ 0.47
CSTF3-204ENST00000524556 IGHA2P01877 340 aa17.96■□□□□ 0.47
CSTF3-204ENST00000524556 VCAM1P19320 739 aa17.96■□□□□ 0.47
CSTF3-204ENST00000524556 ATN1P54259 1190 aaPredicted RBP17.96■□□□□ 0.47
CSTF3-204ENST00000524556 ABCB5Q2M3G0 1257 aa17.96■□□□□ 0.47
CSTF3-204ENST00000524556 CERKLQ49MI3 558 aaPredicted RBP17.96■□□□□ 0.47
CSTF3-204ENST00000524556 MIGA1Q8NAN2 632 aa17.96■□□□□ 0.47
CSTF3-204ENST00000524556 NPLOC4Q8TAT6 608 aa17.96■□□□□ 0.47
CSTF3-204ENST00000524556 COL25A1Q9BXS0 654 aaPredicted RBP17.96■□□□□ 0.47
CSTF3-204ENST00000524556 DBNLQ9UJU6 430 aaKnown RBP17.96■□□□□ 0.47
CSTF3-204ENST00000524556 IVNS1ABPQ9Y6Y0 642 aa17.96■□□□□ 0.47
CSTF3-204ENST00000524556 VCANP13611 3396 aa17.95■□□□□ 0.46
CSTF3-204ENST00000524556 IDH1O75874 414 aaKnown RBP17.95■□□□□ 0.46
CSTF3-204ENST00000524556 TTC6Q86TZ1 520 aa17.95■□□□□ 0.46
CSTF3-204ENST00000524556 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.95■□□□□ 0.46
CSTF3-204ENST00000524556 TRPV1Q8NER1 839 aa17.95■□□□□ 0.46
CSTF3-204ENST00000524556 LTBP2Q14767 1821 aa17.95■□□□□ 0.46
CSTF3-204ENST00000524556 PRUNE2Q8WUY3 3088 aa17.94■□□□□ 0.46
CSTF3-204ENST00000524556 SPDYE16A6NNV3 312 aaPredicted RBP17.94■□□□□ 0.46
CSTF3-204ENST00000524556 CYP2C19P33261 490 aa17.94■□□□□ 0.46
CSTF3-204ENST00000524556 RTP1P59025 263 aa17.94■□□□□ 0.46
CSTF3-204ENST00000524556 TMEM57Q8N5G2 664 aa17.94■□□□□ 0.46
CSTF3-204ENST00000524556 MAGEB6Q8N7X4 407 aa17.94■□□□□ 0.46
CSTF3-204ENST00000524556 CCDC8Q9H0W5 538 aaPredicted RBP17.94■□□□□ 0.46
CSTF3-204ENST00000524556 RPAP3Q9H6T3 665 aaPredicted RBP17.94■□□□□ 0.46
CSTF3-204ENST00000524556 CABP5Q9NP86 173 aa17.94■□□□□ 0.46
CSTF3-204ENST00000524556 TLR7Q9NYK1 1049 aaKnown RBP17.94■□□□□ 0.46
CSTF3-204ENST00000524556 PRKAG2Q9UGJ0 569 aa17.94■□□□□ 0.46
CSTF3-204ENST00000524556 NOP58Q9Y2X3 529 aaKnown RBP17.94■□□□□ 0.46
CSTF3-204ENST00000524556 CYBAP13498 195 aa17.93■□□□□ 0.46
CSTF3-204ENST00000524556 GUCY1A2P33402 732 aa17.93■□□□□ 0.46
CSTF3-204ENST00000524556 SHMT1P34896 483 aa17.93■□□□□ 0.46
CSTF3-204ENST00000524556 FAM161BQ96MY7 647 aa17.93■□□□□ 0.46
CSTF3-204ENST00000524556 PLCD1P51178 756 aa17.92■□□□□ 0.46
CSTF3-204ENST00000524556 GJC2Q5T442 439 aaPredicted RBP17.92■□□□□ 0.46
CSTF3-204ENST00000524556 TMED8Q6PL24 325 aaPredicted RBP17.92■□□□□ 0.46
CSTF3-204ENST00000524556 DPP9Q86TI2 863 aa17.92■□□□□ 0.46
CSTF3-204ENST00000524556 ARRDC4Q8NCT1 418 aa17.92■□□□□ 0.46
CSTF3-204ENST00000524556 EAF2Q96CJ1 260 aaPredicted RBP17.92■□□□□ 0.46
CSTF3-204ENST00000524556 ZNF236Q9UL36 1845 aa17.92■□□□□ 0.46
CSTF3-204ENST00000524556 STRNO43815 780 aa17.91■□□□□ 0.46
CSTF3-204ENST00000524556 MAP3K12Q12852 859 aa17.91■□□□□ 0.46
CSTF3-204ENST00000524556 ZNF697Q5TEC3 545 aa17.91■□□□□ 0.46
CSTF3-204ENST00000524556 OLFML2BQ68BL8 750 aa17.91■□□□□ 0.46
CSTF3-204ENST00000524556 MOV10L1Q9BXT6 1211 aaKnown RBP17.91■□□□□ 0.46
CSTF3-204ENST00000524556 ANTXR1Q9H6X2 564 aa17.91■□□□□ 0.46
CSTF3-204ENST00000524556 HOXC10Q9NYD6 342 aa17.91■□□□□ 0.46
CSTF3-204ENST00000524556 ATP11BQ9Y2G3 1177 aa17.91■□□□□ 0.46
CSTF3-204ENST00000524556 ZNFX1Q9P2E3 1918 aaKnown RBP17.9■□□□□ 0.46
CSTF3-204ENST00000524556 ADORA2AP29274 412 aa17.9■□□□□ 0.46
CSTF3-204ENST00000524556 COG2Q14746 738 aa17.9■□□□□ 0.46
CSTF3-204ENST00000524556 SEPT2Q15019 361 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms