RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 PNMA3Q9UL41 463 aa14.95□□□□□ -0.02
VEGFA-225ENST00000523950 CASP8AP2Q9UKL3 1982 aa14.94□□□□□ -0.02
VEGFA-225ENST00000523950 TLR2O60603 784 aa14.94□□□□□ -0.02
VEGFA-225ENST00000523950 AKR1B1P15121 316 aa14.94□□□□□ -0.02
VEGFA-225ENST00000523950 GUCY1A2P33402 732 aa14.94□□□□□ -0.02
VEGFA-225ENST00000523950 NT5C2P49902 561 aa14.94□□□□□ -0.02
VEGFA-225ENST00000523950 MTMR2Q13614 643 aa14.94□□□□□ -0.02
VEGFA-225ENST00000523950 SEPT2Q15019 361 aa14.94□□□□□ -0.02
VEGFA-225ENST00000523950 SHROOM1Q2M3G4 852 aaPredicted RBP14.94□□□□□ -0.02
VEGFA-225ENST00000523950 USP17L2Q6R6M4 530 aa14.94□□□□□ -0.02
VEGFA-225ENST00000523950 FEZ1Q99689 392 aa14.94□□□□□ -0.02
VEGFA-225ENST00000523950 DSCC1Q9BVC3 393 aa14.94□□□□□ -0.02
VEGFA-225ENST00000523950 KIAA1683Q9H0B3 1180 aa14.94□□□□□ -0.02
VEGFA-225ENST00000523950 SH2D4AQ9H788 454 aa14.94□□□□□ -0.02
VEGFA-225ENST00000523950 SMIM22K7EJ46 135 aa14.93□□□□□ -0.02
VEGFA-225ENST00000523950 FKTNO75072 461 aa14.93□□□□□ -0.02
VEGFA-225ENST00000523950 FGAP02671 866 aa14.93□□□□□ -0.02
VEGFA-225ENST00000523950 PCP11498 1178 aaKnown RBP14.93□□□□□ -0.02
VEGFA-225ENST00000523950 RASA1P20936 1047 aa14.93□□□□□ -0.02
VEGFA-225ENST00000523950 CHMLP26374 656 aa14.93□□□□□ -0.02
VEGFA-225ENST00000523950 HMGCS2P54868 508 aa14.93□□□□□ -0.02
VEGFA-225ENST00000523950 ZNF444Q8N0Y2 327 aaPredicted RBP14.93□□□□□ -0.02
VEGFA-225ENST00000523950 KANSL2Q9H9L4 492 aa14.93□□□□□ -0.02
VEGFA-225ENST00000523950 ARHGEF10LQ9HCE6 1279 aa14.93□□□□□ -0.02
VEGFA-225ENST00000523950 PLIN4Q96Q06 1357 aa14.93□□□□□ -0.02
VEGFA-225ENST00000523950 OSBPP22059 807 aa14.92□□□□□ -0.02
VEGFA-225ENST00000523950 HOXA7P31268 230 aaPredicted RBP14.92□□□□□ -0.02
VEGFA-225ENST00000523950 ICA1Q05084 483 aa14.92□□□□□ -0.02
VEGFA-225ENST00000523950 PPP4R3BQ5MIZ7 849 aa14.92□□□□□ -0.02
VEGFA-225ENST00000523950 ZNF296Q8WUU4 475 aaPredicted RBP14.92□□□□□ -0.02
VEGFA-225ENST00000523950 ADGRA2Q96PE1 1338 aa14.92□□□□□ -0.02
VEGFA-225ENST00000523950 FGRP09769 529 aa14.91□□□□□ -0.02
VEGFA-225ENST00000523950 SP3Q02447 781 aa14.91□□□□□ -0.02
VEGFA-225ENST00000523950 ERO1AQ96HE7 468 aa14.91□□□□□ -0.02
VEGFA-225ENST00000523950 R3HDMLQ9H3Y0 253 aa14.91□□□□□ -0.02
VEGFA-225ENST00000523950 CTNNA3Q9UI47 895 aa14.91□□□□□ -0.02
VEGFA-225ENST00000523950 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.91□□□□□ -0.022e-6■□□□□ 9
VEGFA-225ENST00000523950 TMX2Q9Y320 296 aa14.91□□□□□ -0.02
VEGFA-225ENST00000523950 SGSM2O43147 1006 aa14.9□□□□□ -0.02
VEGFA-225ENST00000523950 ORC4O43929 436 aa14.9□□□□□ -0.02
VEGFA-225ENST00000523950 ARHGEF6Q15052 776 aa14.9□□□□□ -0.02
VEGFA-225ENST00000523950 TREML2Q5T2D2 321 aa14.9□□□□□ -0.02
VEGFA-225ENST00000523950 COL13A1Q5TAT6 717 aaPredicted RBP14.9□□□□□ -0.02
VEGFA-225ENST00000523950 C17orf99Q6UX52 265 aa14.9□□□□□ -0.02
VEGFA-225ENST00000523950 ACER1Q8TDN7 264 aa14.9□□□□□ -0.02
VEGFA-225ENST00000523950 GTF3C2Q8WUA4 911 aaPredicted RBP14.9□□□□□ -0.02
VEGFA-225ENST00000523950 LPAR1Q92633 364 aa14.9□□□□□ -0.02
VEGFA-225ENST00000523950 RNF41Q9H4P4 317 aaPredicted RBP14.9□□□□□ -0.02
VEGFA-225ENST00000523950 EMILIN3Q9NT22 766 aa14.9□□□□□ -0.02
VEGFA-225ENST00000523950 SYNPO2Q9UMS6 1093 aa14.9□□□□□ -0.02
VEGFA-225ENST00000523950 IGKV6D-41A0A0C4DH26 115 aa14.89□□□□□ -0.03
VEGFA-225ENST00000523950 ZNF213O14771 459 aa14.89□□□□□ -0.03
VEGFA-225ENST00000523950 TSPY3P0CV98 308 aa14.89□□□□□ -0.03
VEGFA-225ENST00000523950 TSPY8P0CW00 308 aa14.89□□□□□ -0.03
VEGFA-225ENST00000523950 GCLCP48506 637 aaPredicted RBP14.89□□□□□ -0.03
VEGFA-225ENST00000523950 CTU1Q7Z7A3 348 aaKnown RBP14.89□□□□□ -0.03
VEGFA-225ENST00000523950 STK11IPQ8N1F8 1099 aa14.89□□□□□ -0.03
VEGFA-225ENST00000523950 NEDD1Q8NHV4 660 aa14.89□□□□□ -0.03
VEGFA-225ENST00000523950 SMCR8Q8TEV9 937 aaPredicted RBP14.89□□□□□ -0.03
VEGFA-225ENST00000523950 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.89□□□□□ -0.03
VEGFA-225ENST00000523950 NYAP2Q9P242 653 aa14.89□□□□□ -0.03
VEGFA-225ENST00000523950 MYH4Q9Y623 1939 aa14.89□□□□□ -0.03
VEGFA-225ENST00000523950 A0A1W2PRG0 241 aa14.88□□□□□ -0.03
VEGFA-225ENST00000523950 USP17L15C9J2P7 530 aa14.88□□□□□ -0.03
VEGFA-225ENST00000523950 USP17L13C9JLJ4 530 aa14.88□□□□□ -0.03
VEGFA-225ENST00000523950 USP17L11C9JVI0 530 aa14.88□□□□□ -0.03
VEGFA-225ENST00000523950 USP17L18D6R9N7 530 aa14.88□□□□□ -0.03
VEGFA-225ENST00000523950 USP17L22D6RA61 530 aa14.88□□□□□ -0.03
VEGFA-225ENST00000523950 USP17L17D6RBQ6 530 aa14.88□□□□□ -0.03
VEGFA-225ENST00000523950 USP17L19D6RCP7 530 aa14.88□□□□□ -0.03
VEGFA-225ENST00000523950 USP17L20D6RJB6 530 aa14.88□□□□□ -0.03
VEGFA-225ENST00000523950 PRDM1O75626 825 aa14.88□□□□□ -0.03
VEGFA-225ENST00000523950 CYP2C8P10632 490 aa14.88□□□□□ -0.03
VEGFA-225ENST00000523950 BCRP11274 1271 aa14.88□□□□□ -0.03
VEGFA-225ENST00000523950 EEF2P13639 858 aaKnown RBP14.88□□□□□ -0.03
VEGFA-225ENST00000523950 VCAM1P19320 739 aa14.88□□□□□ -0.03
VEGFA-225ENST00000523950 IRX3P78415 501 aaPredicted RBP14.88□□□□□ -0.03
VEGFA-225ENST00000523950 CTDSPL2Q05D32 466 aa14.88□□□□□ -0.03
VEGFA-225ENST00000523950 USP17L24Q0WX57 530 aa14.88□□□□□ -0.03
VEGFA-225ENST00000523950 PKN2Q16513 984 aaKnown RBP14.88□□□□□ -0.03
VEGFA-225ENST00000523950 IMMTQ16891 758 aaKnown RBP14.88□□□□□ -0.03
VEGFA-225ENST00000523950 AKNAD1Q5T1N1 836 aa14.88□□□□□ -0.03
VEGFA-225ENST00000523950 CASC1Q6TDU7 716 aa14.88□□□□□ -0.03
VEGFA-225ENST00000523950 SIAH1Q8IUQ4 282 aa14.88□□□□□ -0.03
VEGFA-225ENST00000523950 STAG1Q8WVM7 1258 aa14.88□□□□□ -0.03
VEGFA-225ENST00000523950 ASCC2Q9H1I8 757 aaPredicted RBP14.88□□□□□ -0.03
VEGFA-225ENST00000523950 VCPKMTQ9H867 229 aa14.88□□□□□ -0.03
VEGFA-225ENST00000523950 TSPY2A6NKD2 308 aa14.87□□□□□ -0.03
VEGFA-225ENST00000523950 TFAP4Q01664 338 aa14.87□□□□□ -0.03
VEGFA-225ENST00000523950 DGKZQ13574 1117 aa14.87□□□□□ -0.03
VEGFA-225ENST00000523950 KIF22Q14807 665 aa14.87□□□□□ -0.03
VEGFA-225ENST00000523950 ZYXQ15942 572 aaKnown RBP14.87□□□□□ -0.03
VEGFA-225ENST00000523950 IL25Q9H293 177 aa14.87□□□□□ -0.03
VEGFA-225ENST00000523950 GOPCQ9HD26 462 aa14.87□□□□□ -0.03
VEGFA-225ENST00000523950 CPA4Q9UI42 421 aa14.87□□□□□ -0.03
VEGFA-225ENST00000523950 U3KPZ7 1027 aaPredicted RBP14.87□□□□□ -0.03
VEGFA-225ENST00000523950 WDR46O15213 610 aaKnown RBP14.86□□□□□ -0.03
VEGFA-225ENST00000523950 CDC45O75419 566 aa14.86□□□□□ -0.03
VEGFA-225ENST00000523950 TTLL1O95922 423 aa14.86□□□□□ -0.03
VEGFA-225ENST00000523950 GNRH1P01148 92 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms