RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 BLZF1Q9H2G9 400 aa14.73□□□□□ -0.05
PCDHGB1-201ENST00000523390 MINPP1Q9UNW1 487 aa14.73□□□□□ -0.05
PCDHGB1-201ENST00000523390 CARMIL3Q8ND23 1372 aa14.72□□□□□ -0.05
PCDHGB1-201ENST00000523390 FANCCQ00597 558 aa14.72□□□□□ -0.05
PCDHGB1-201ENST00000523390 RAD51AP2Q09MP3 1159 aa14.72□□□□□ -0.05
PCDHGB1-201ENST00000523390 SCARF1Q14162 830 aa14.72□□□□□ -0.05
PCDHGB1-201ENST00000523390 NSMFQ6X4W1 530 aa14.72□□□□□ -0.05
PCDHGB1-201ENST00000523390 TCHPQ9BT92 498 aa14.72□□□□□ -0.05
PCDHGB1-201ENST00000523390 NLRP12P59046 1061 aa14.72□□□□□ -0.05
PCDHGB1-201ENST00000523390 TAF3Q5VWG9 929 aa14.72□□□□□ -0.05
PCDHGB1-201ENST00000523390 DYMQ7RTS9 669 aa14.72□□□□□ -0.05
PCDHGB1-201ENST00000523390 C17orf53Q8N3J3 647 aaPredicted RBP14.72□□□□□ -0.05
PCDHGB1-201ENST00000523390 AIFM3Q96NN9 605 aa14.72□□□□□ -0.05
PCDHGB1-201ENST00000523390 PUF60Q9UHX1 559 aaKnown RBP14.72□□□□□ -0.05
PCDHGB1-201ENST00000523390 CEMIPQ8WUJ3 1361 aa14.72□□□□□ -0.05
PCDHGB1-201ENST00000523390 MROH1Q8NDA8 1641 aa14.72□□□□□ -0.05
PCDHGB1-201ENST00000523390 PRDX5P30044 214 aa14.72□□□□□ -0.05
PCDHGB1-201ENST00000523390 CCDC65Q8IXS2 484 aa14.72□□□□□ -0.05
PCDHGB1-201ENST00000523390 PAF1Q8N7H5 531 aa14.72□□□□□ -0.05
PCDHGB1-201ENST00000523390 DYNLL2Q96FJ2 89 aa14.72□□□□□ -0.05
PCDHGB1-201ENST00000523390 MPHOSPH6Q99547 160 aaKnown RBP14.72□□□□□ -0.05
PCDHGB1-201ENST00000523390 PRPF4BQ13523 1007 aaKnown RBP14.71□□□□□ -0.05
PCDHGB1-201ENST00000523390 CALCRLQ16602 461 aa14.71□□□□□ -0.05
PCDHGB1-201ENST00000523390 RABL6Q3YEC7 729 aaPredicted RBP14.71□□□□□ -0.05
PCDHGB1-201ENST00000523390 CERKLQ49MI3 558 aaPredicted RBP14.71□□□□□ -0.05
PCDHGB1-201ENST00000523390 NCAPH2Q6IBW4 605 aa14.71□□□□□ -0.05
PCDHGB1-201ENST00000523390 FNBP4Q8N3X1 1017 aaPredicted RBP14.71□□□□□ -0.05
PCDHGB1-201ENST00000523390 MLKLQ8NB16 471 aa14.71□□□□□ -0.05
PCDHGB1-201ENST00000523390 NAP1L4Q99733 375 aaKnown RBP14.71□□□□□ -0.05
PCDHGB1-201ENST00000523390 CRACR2AQ9BSW2 395 aa14.71□□□□□ -0.05
PCDHGB1-201ENST00000523390 CD163L1Q9NR16 1453 aa14.71□□□□□ -0.05
PCDHGB1-201ENST00000523390 SPDYE4A6NLX3 237 aa14.71□□□□□ -0.05
PCDHGB1-201ENST00000523390 ERCC3P19447 782 aa14.71□□□□□ -0.05
PCDHGB1-201ENST00000523390 MARCH10Q8NA82 808 aaPredicted RBP14.71□□□□□ -0.05
PCDHGB1-201ENST00000523390 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.71□□□□□ -0.05
PCDHGB1-201ENST00000523390 TSC1Q92574 1164 aa14.71□□□□□ -0.05
PCDHGB1-201ENST00000523390 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.71□□□□□ -0.05
PCDHGB1-201ENST00000523390 ZNF75DP51815 510 aa14.71□□□□□ -0.05
PCDHGB1-201ENST00000523390 GLT8D2Q9H1C3 349 aa14.71□□□□□ -0.05
PCDHGB1-201ENST00000523390 LZTFL1Q9NQ48 299 aa14.71□□□□□ -0.05
PCDHGB1-201ENST00000523390 KIAA1468Q9P260 1216 aa14.71□□□□□ -0.05
PCDHGB1-201ENST00000523390 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.71□□□□□ -0.05
PCDHGB1-201ENST00000523390 LUC7L2Q9Y383 392 aaKnown RBP14.71□□□□□ -0.05
PCDHGB1-201ENST00000523390 V9GYY5 206 aaPredicted RBP14.71□□□□□ -0.05
PCDHGB1-201ENST00000523390 OVOS2A0A0G2JMS6 1433 aa14.71□□□□□ -0.06
PCDHGB1-201ENST00000523390 CLRN2A0PK11 232 aa14.71□□□□□ -0.06
PCDHGB1-201ENST00000523390 SH2B2O14492 632 aaPredicted RBP14.71□□□□□ -0.06
PCDHGB1-201ENST00000523390 CCDC175P0C221 793 aa14.71□□□□□ -0.06
PCDHGB1-201ENST00000523390 ATG9AQ7Z3C6 839 aa14.71□□□□□ -0.06
PCDHGB1-201ENST00000523390 KIFC2Q96AC6 838 aa14.71□□□□□ -0.06
PCDHGB1-201ENST00000523390 PRIMPOLQ96LW4 560 aa14.71□□□□□ -0.06
PCDHGB1-201ENST00000523390 GBP3Q9H0R5 595 aa14.71□□□□□ -0.06
PCDHGB1-201ENST00000523390 INCENPQ9NQS7 918 aa14.71□□□□□ -0.06
PCDHGB1-201ENST00000523390 SYNRGQ9UMZ2 1314 aa14.7□□□□□ -0.06
PCDHGB1-201ENST00000523390 DDAH1O94760 285 aa14.7□□□□□ -0.06
PCDHGB1-201ENST00000523390 ZNF827Q17R98 1081 aa14.7□□□□□ -0.06
PCDHGB1-201ENST00000523390 PAXBP1Q9Y5B6 917 aa14.7□□□□□ -0.06
PCDHGB1-201ENST00000523390 SOS2Q07890 1332 aaPredicted RBP14.7□□□□□ -0.06
PCDHGB1-201ENST00000523390 DDX39AO00148 427 aaKnown RBP14.7□□□□□ -0.06
PCDHGB1-201ENST00000523390 ICA1Q05084 483 aa14.7□□□□□ -0.06
PCDHGB1-201ENST00000523390 CABP7Q86V35 215 aa14.7□□□□□ -0.06
PCDHGB1-201ENST00000523390 DYNC1I1O14576 645 aa14.7□□□□□ -0.06
PCDHGB1-201ENST00000523390 CHGBP05060 677 aa14.7□□□□□ -0.06
PCDHGB1-201ENST00000523390 PCP11498 1178 aaKnown RBP14.7□□□□□ -0.06
PCDHGB1-201ENST00000523390 MYCLP12524 364 aaPredicted RBP14.7□□□□□ -0.06
PCDHGB1-201ENST00000523390 CETN2P41208 172 aa14.7□□□□□ -0.06
PCDHGB1-201ENST00000523390 TBC1D8BQ0IIM8 1120 aa14.7□□□□□ -0.06
PCDHGB1-201ENST00000523390 GJD4Q96KN9 370 aaPredicted RBP14.7□□□□□ -0.06
PCDHGB1-201ENST00000523390 CCDC42Q96M95 316 aa14.7□□□□□ -0.06
PCDHGB1-201ENST00000523390 ZNF408Q9H9D4 720 aa14.7□□□□□ -0.06
PCDHGB1-201ENST00000523390 USP32Q8NFA0 1604 aa14.7□□□□□ -0.06
PCDHGB1-201ENST00000523390 NDUFA8P51970 172 aa14.7□□□□□ -0.06
PCDHGB1-201ENST00000523390 PDIA6Q15084 440 aa14.7□□□□□ -0.06
PCDHGB1-201ENST00000523390 CSGALNACT2Q8N6G5 542 aa14.7□□□□□ -0.06
PCDHGB1-201ENST00000523390 IGSF22Q8N9C0 903 aa14.69□□□□□ -0.06
PCDHGB1-201ENST00000523390 NEK11Q8NG66 645 aa14.69□□□□□ -0.06
PCDHGB1-201ENST00000523390 HAUS3Q68CZ6 603 aa14.69□□□□□ -0.06
PCDHGB1-201ENST00000523390 RASGRP4Q8TDF6 673 aa14.69□□□□□ -0.06
PCDHGB1-201ENST00000523390 CMA1P23946 247 aa14.69□□□□□ -0.06
PCDHGB1-201ENST00000523390 HERC4Q5GLZ8 1057 aaPredicted RBP14.69□□□□□ -0.06
PCDHGB1-201ENST00000523390 DCAF17Q5H9S7 520 aaPredicted RBP14.69□□□□□ -0.06
PCDHGB1-201ENST00000523390 GJB4Q9NTQ9 266 aa14.69□□□□□ -0.06
PCDHGB1-201ENST00000523390 TBC1D7Q9P0N9 293 aa14.69□□□□□ -0.06
PCDHGB1-201ENST00000523390 MAP2P11137 1827 aaKnown RBP14.69□□□□□ -0.06
PCDHGB1-201ENST00000523390 PAK1Q13153 545 aa14.68□□□□□ -0.06
PCDHGB1-201ENST00000523390 NR5A1Q13285 461 aa14.68□□□□□ -0.06
PCDHGB1-201ENST00000523390 PPP1R9BQ96SB3 815 aa14.68□□□□□ -0.06
PCDHGB1-201ENST00000523390 PTGDRQ13258 359 aa14.68□□□□□ -0.06
PCDHGB1-201ENST00000523390 TOB2Q14106 344 aaPredicted RBP14.68□□□□□ -0.06
PCDHGB1-201ENST00000523390 TMC4Q7Z404 712 aa14.68□□□□□ -0.06
PCDHGB1-201ENST00000523390 NOC4LQ9BVI4 516 aaKnown RBP14.68□□□□□ -0.06
PCDHGB1-201ENST00000523390 RNF26Q9BY78 433 aaPredicted RBP14.68□□□□□ -0.06
PCDHGB1-201ENST00000523390 TMOD4Q9NZQ9 345 aa14.68□□□□□ -0.06
PCDHGB1-201ENST00000523390 SLFN13Q68D06 897 aa14.68□□□□□ -0.06
PCDHGB1-201ENST00000523390 TBC1D10CQ8IV04 446 aa14.68□□□□□ -0.06
PCDHGB1-201ENST00000523390 GTPBP4Q9BZE4 634 aaKnown RBP14.68□□□□□ -0.06
PCDHGB1-201ENST00000523390 GUCA1BQ9UMX6 200 aa14.68□□□□□ -0.06
PCDHGB1-201ENST00000523390 CPDO75976 1380 aa14.68□□□□□ -0.06
PCDHGB1-201ENST00000523390 RAD17O75943 681 aa14.68□□□□□ -0.06
PCDHGB1-201ENST00000523390 CNNM4Q6P4Q7 775 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms