RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 CCDC114Q96M63 670 aa10.15□□□□□ -0.79
CSMD1-212ENST00000523387 LUC7LQ9NQ29 371 aaKnown RBP10.15□□□□□ -0.79
CSMD1-212ENST00000523387 TMEM2Q9UHN6 1383 aa10.15□□□□□ -0.79
CSMD1-212ENST00000523387 KCNA6P17658 529 aa10.14□□□□□ -0.79
CSMD1-212ENST00000523387 KRT2P35908 639 aa10.14□□□□□ -0.79
CSMD1-212ENST00000523387 COPB1P53618 953 aaKnown RBP10.14□□□□□ -0.79
CSMD1-212ENST00000523387 MORC3Q14149 939 aa10.14□□□□□ -0.79
CSMD1-212ENST00000523387 PI16Q6UXB8 463 aa10.14□□□□□ -0.79
CSMD1-212ENST00000523387 MB21D2Q8IYB1 491 aaPredicted RBP10.14□□□□□ -0.79
CSMD1-212ENST00000523387 RNF41Q9H4P4 317 aaPredicted RBP10.14□□□□□ -0.79
CSMD1-212ENST00000523387 HDAC6Q9UBN7 1215 aa10.14□□□□□ -0.79
CSMD1-212ENST00000523387 PCDHB6Q9Y5E3 794 aa10.14□□□□□ -0.79
CSMD1-212ENST00000523387 GPTP24298 496 aa10.14□□□□□ -0.79
CSMD1-212ENST00000523387 CDC27P30260 824 aa10.14□□□□□ -0.79
CSMD1-212ENST00000523387 CCDC121Q6ZUS5 278 aa10.14□□□□□ -0.79
CSMD1-212ENST00000523387 CATIPQ7Z7H3 387 aa10.14□□□□□ -0.79
CSMD1-212ENST00000523387 TAF4BQ92750 862 aa10.14□□□□□ -0.79
CSMD1-212ENST00000523387 SECISBP2LQ93073 1101 aaKnown RBP10.14□□□□□ -0.79
CSMD1-212ENST00000523387 SLC52A2Q9HAB3 445 aa10.14□□□□□ -0.79
CSMD1-212ENST00000523387 ABCF2Q9UG63 623 aa10.14□□□□□ -0.79
CSMD1-212ENST00000523387 MAP2K7O14733 419 aa10.14□□□□□ -0.79
CSMD1-212ENST00000523387 UBA7P41226 1012 aa10.14□□□□□ -0.79
CSMD1-212ENST00000523387 TBC1D8BQ0IIM8 1120 aa10.14□□□□□ -0.79
CSMD1-212ENST00000523387 NBPF14Q5TI25 921 aa10.14□□□□□ -0.79
CSMD1-212ENST00000523387 KCTD16Q68DU8 428 aa10.14□□□□□ -0.79
CSMD1-212ENST00000523387 C8orf74Q6P047 294 aa10.14□□□□□ -0.79
CSMD1-212ENST00000523387 PYM1Q9BRP8 204 aaKnown RBP10.14□□□□□ -0.79
CSMD1-212ENST00000523387 PTPREP23469 700 aa10.13□□□□□ -0.79
CSMD1-212ENST00000523387 CDC25AP30304 524 aa10.13□□□□□ -0.79
CSMD1-212ENST00000523387 HPDP32754 393 aaPredicted RBP10.13□□□□□ -0.79
CSMD1-212ENST00000523387 MCM7P33993 719 aa10.13□□□□□ -0.79
CSMD1-212ENST00000523387 TMTC2Q8N394 836 aa10.13□□□□□ -0.79
CSMD1-212ENST00000523387 SCLT1Q96NL6 688 aa10.13□□□□□ -0.79
CSMD1-212ENST00000523387 PLIN2Q99541 437 aa10.13□□□□□ -0.79
CSMD1-212ENST00000523387 VPS54Q9P1Q0 977 aa10.13□□□□□ -0.79
CSMD1-212ENST00000523387 LRRIQ3A6PVS8 624 aaPredicted RBP10.13□□□□□ -0.79
CSMD1-212ENST00000523387 MBD4O95243 580 aa10.13□□□□□ -0.79
CSMD1-212ENST00000523387 NDUFA10O95299 355 aa10.13□□□□□ -0.79
CSMD1-212ENST00000523387 CALRP27797 417 aaKnown RBP10.13□□□□□ -0.79
CSMD1-212ENST00000523387 EPS15P42566 896 aa10.13□□□□□ -0.79
CSMD1-212ENST00000523387 MRPS25P82663 173 aaKnown RBP10.13□□□□□ -0.79
CSMD1-212ENST00000523387 C2orf54Q08AI8 447 aa10.13□□□□□ -0.79
CSMD1-212ENST00000523387 MSANTD4Q8NCY6 345 aa10.13□□□□□ -0.79
CSMD1-212ENST00000523387 SYMPKQ92797 1274 aaKnown RBP10.13□□□□□ -0.79
CSMD1-212ENST00000523387 SELENOOQ9BVL4 669 aa10.13□□□□□ -0.79
CSMD1-212ENST00000523387 A0A1B0GTH6 734 aa10.13□□□□□ -0.79
CSMD1-212ENST00000523387 GOLGA8KD6RF30 607 aa10.13□□□□□ -0.79
CSMD1-212ENST00000523387 SH2B2O14492 632 aaPredicted RBP10.13□□□□□ -0.79
CSMD1-212ENST00000523387 ARHGAP25P42331 645 aa10.13□□□□□ -0.79
CSMD1-212ENST00000523387 FXR1P51114 621 aaKnown RBP eCLIP10.13□□□□□ -0.79
CSMD1-212ENST00000523387 USP14P54578 494 aa10.13□□□□□ -0.79
CSMD1-212ENST00000523387 NR1I3Q14994 352 aa10.13□□□□□ -0.79
CSMD1-212ENST00000523387 EPSTI1Q96J88 318 aa10.13□□□□□ -0.79
CSMD1-212ENST00000523387 SLC4A4Q9Y6R1 1079 aa10.13□□□□□ -0.79
CSMD1-212ENST00000523387 PLEKHG2Q9H7P9 1386 aa10.12□□□□□ -0.79
CSMD1-212ENST00000523387 ANKRD18BA2A2Z9 1011 aa10.12□□□□□ -0.79
CSMD1-212ENST00000523387 KRT31Q15323 416 aa10.12□□□□□ -0.79
CSMD1-212ENST00000523387 CCDC178Q5BJE1 867 aa10.12□□□□□ -0.79
CSMD1-212ENST00000523387 FOXP4Q8IVH2 680 aaPredicted RBP10.12□□□□□ -0.79
CSMD1-212ENST00000523387 BANK1Q8NDB2 785 aa10.12□□□□□ -0.79
CSMD1-212ENST00000523387 COG1Q8WTW3 980 aa10.12□□□□□ -0.79
CSMD1-212ENST00000523387 EEF2KMTQ96G04 330 aa10.12□□□□□ -0.79
CSMD1-212ENST00000523387 GSDMAQ96QA5 445 aa10.12□□□□□ -0.79
CSMD1-212ENST00000523387 ABHD10Q9NUJ1 306 aa10.12□□□□□ -0.79
CSMD1-212ENST00000523387 SETD1BQ9UPS6 1966 aaKnown RBP10.12□□□□□ -0.79
CSMD1-212ENST00000523387 ZNF532Q9HCE3 1301 aa10.12□□□□□ -0.79
CSMD1-212ENST00000523387 RASGRP2Q7LDG7 609 aa10.12□□□□□ -0.79
CSMD1-212ENST00000523387 IQCA1Q86XH1 822 aa10.12□□□□□ -0.79
CSMD1-212ENST00000523387 ANKLE2Q86XL3 938 aa10.12□□□□□ -0.79
CSMD1-212ENST00000523387 MAGEB6Q8N7X4 407 aa10.12□□□□□ -0.79
CSMD1-212ENST00000523387 JPH2Q9BR39 696 aaPredicted RBP10.12□□□□□ -0.79
CSMD1-212ENST00000523387 MMRN2Q9H8L6 949 aa10.12□□□□□ -0.79
CSMD1-212ENST00000523387 INTS13Q9NVM9 706 aa10.12□□□□□ -0.79
CSMD1-212ENST00000523387 HPS5Q9UPZ3 1129 aa10.12□□□□□ -0.79
CSMD1-212ENST00000523387 HPSEQ9Y251 543 aa10.12□□□□□ -0.79
CSMD1-212ENST00000523387 SALL1Q9NSC2 1324 aa10.12□□□□□ -0.79
CSMD1-212ENST00000523387 MMP1P03956 469 aa10.12□□□□□ -0.79
CSMD1-212ENST00000523387 CCDC172P0C7W6 258 aa10.12□□□□□ -0.79
CSMD1-212ENST00000523387 GBP2P32456 591 aaPredicted RBP10.12□□□□□ -0.79
CSMD1-212ENST00000523387 NOP2P46087 812 aaKnown RBP10.12□□□□□ -0.79
CSMD1-212ENST00000523387 FBXW10Q5XX13 1052 aa10.12□□□□□ -0.79
CSMD1-212ENST00000523387 GPR108Q9NPR9 543 aa10.12□□□□□ -0.79
CSMD1-212ENST00000523387 COL15A1P39059 1388 aa10.12□□□□□ -0.79
CSMD1-212ENST00000523387 EZRP15311 586 aaKnown RBP10.11□□□□□ -0.79
CSMD1-212ENST00000523387 TTC38Q5R3I4 469 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 FAM114A1Q8IWE2 563 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 HELBQ8NG08 1087 aaPredicted RBP10.11□□□□□ -0.79
CSMD1-212ENST00000523387 FAM89AQ96GI7 184 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 CDK5RAP3Q96JB5 506 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 CABS1Q96KC9 395 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 AGXT2Q9BYV1 514 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 RAB21Q9UL25 225 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 V9GY48 417 aaPredicted RBP10.11□□□□□ -0.79
CSMD1-212ENST00000523387 A6NNZ2 444 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 PDCLQ13371 301 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 TUBB8Q3ZCM7 444 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 CYB5R4Q7L1T6 521 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 FERMT2Q96AC1 680 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 KAT14Q9H8E8 782 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 ARMT1Q9H993 441 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms