RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 SYT1P21579 422 aa7.85□□□□□ -1.15
PVT1-217ENST00000523190 NT5C2P49902 561 aa7.85□□□□□ -1.15
PVT1-217ENST00000523190 HMGN5P82970 282 aaKnown RBP7.85□□□□□ -1.15
PVT1-217ENST00000523190 NFKBIBQ15653 356 aa7.85□□□□□ -1.15
PVT1-217ENST00000523190 RTN1Q16799 776 aa7.85□□□□□ -1.15
PVT1-217ENST00000523190 KIF4BQ2VIQ3 1234 aa7.85□□□□□ -1.15
PVT1-217ENST00000523190 C9orf131Q5VYM1 1079 aa7.85□□□□□ -1.15
PVT1-217ENST00000523190 RCSD1Q6JBY9 416 aa7.85□□□□□ -1.15
PVT1-217ENST00000523190 CATIPQ7Z7H3 387 aa7.85□□□□□ -1.15
PVT1-217ENST00000523190 FAM184AQ8NB25 1140 aa7.85□□□□□ -1.15
PVT1-217ENST00000523190 NEDD1Q8NHV4 660 aa7.85□□□□□ -1.15
PVT1-217ENST00000523190 FAM151AQ8WW52 585 aa7.85□□□□□ -1.15
PVT1-217ENST00000523190 CHMP4CQ96CF2 233 aa7.85□□□□□ -1.15
PVT1-217ENST00000523190 TRIM34Q9BYJ4 488 aa7.85□□□□□ -1.15
PVT1-217ENST00000523190 FAM217BQ9NTX9 383 aaPredicted RBP7.85□□□□□ -1.15
PVT1-217ENST00000523190 TCP11L1Q9NUJ3 509 aa7.85□□□□□ -1.15
PVT1-217ENST00000523190 PI4KBQ9UBF8 816 aa7.85□□□□□ -1.15
PVT1-217ENST00000523190 SCAF8Q9UPN6 1271 aaKnown RBP7.85□□□□□ -1.15
PVT1-217ENST00000523190 PLIN4Q96Q06 1357 aa7.84□□□□□ -1.15
PVT1-217ENST00000523190 ASTN2O75129 1339 aaPredicted RBP7.84□□□□□ -1.15
PVT1-217ENST00000523190 WDR33Q9C0J8 1336 aaKnown RBP7.84□□□□□ -1.15
PVT1-217ENST00000523190 MYH8P13535 1937 aa7.84□□□□□ -1.15
PVT1-217ENST00000523190 IGKV6D-41A0A0C4DH26 115 aa7.84□□□□□ -1.15
PVT1-217ENST00000523190 MPHOSPH10O00566 681 aaKnown RBP7.84□□□□□ -1.15
PVT1-217ENST00000523190 STX6O43752 255 aa7.84□□□□□ -1.15
PVT1-217ENST00000523190 DDAH1O94760 285 aa7.84□□□□□ -1.15
PVT1-217ENST00000523190 DDNO94850 711 aaPredicted RBP7.84□□□□□ -1.15
PVT1-217ENST00000523190 ZSCAN22P10073 491 aaPredicted RBP7.84□□□□□ -1.15
PVT1-217ENST00000523190 FDPSP14324 419 aaKnown RBP7.84□□□□□ -1.15
PVT1-217ENST00000523190 MMP14P50281 582 aa7.84□□□□□ -1.15
PVT1-217ENST00000523190 RCAN1P53805 252 aa7.84□□□□□ -1.15
PVT1-217ENST00000523190 GPR162Q16538 588 aa7.84□□□□□ -1.15
PVT1-217ENST00000523190 SHROOM1Q2M3G4 852 aaPredicted RBP7.84□□□□□ -1.15
PVT1-217ENST00000523190 CCDC178Q5BJE1 867 aa7.84□□□□□ -1.15
PVT1-217ENST00000523190 LARP1BQ659C4 914 aaKnown RBP7.84□□□□□ -1.15
PVT1-217ENST00000523190 CPLX2Q6PUV4 134 aaKnown RBP7.84□□□□□ -1.15
PVT1-217ENST00000523190 CDC37L1Q7L3B6 337 aa7.84□□□□□ -1.15
PVT1-217ENST00000523190 DGKHQ86XP1 1220 aa7.84□□□□□ -1.15
PVT1-217ENST00000523190 CLEC10AQ8IUN9 316 aa7.84□□□□□ -1.15
PVT1-217ENST00000523190 CDAN1Q8IWY9 1227 aa7.84□□□□□ -1.15
PVT1-217ENST00000523190 GPC2Q8N158 579 aa7.84□□□□□ -1.15
PVT1-217ENST00000523190 TRPM4Q8TD43 1214 aa7.84□□□□□ -1.15
PVT1-217ENST00000523190 ANKS1AQ92625 1134 aa7.84□□□□□ -1.15
PVT1-217ENST00000523190 PHKBQ93100 1093 aa7.84□□□□□ -1.15
PVT1-217ENST00000523190 CEP95Q96GE4 821 aa7.84□□□□□ -1.15
PVT1-217ENST00000523190 CSRNP1Q96S65 589 aa7.84□□□□□ -1.15
PVT1-217ENST00000523190 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.84□□□□□ -1.15
PVT1-217ENST00000523190 TMEM39BQ9GZU3 492 aa7.84□□□□□ -1.15
PVT1-217ENST00000523190 KAT14Q9H8E8 782 aa7.84□□□□□ -1.15
PVT1-217ENST00000523190 GPRC5DQ9NZD1 345 aa7.84□□□□□ -1.15
PVT1-217ENST00000523190 ORC3Q9UBD5 711 aaPredicted RBP7.84□□□□□ -1.15
PVT1-217ENST00000523190 STX8Q9UNK0 236 aa7.84□□□□□ -1.15
PVT1-217ENST00000523190 MTMR6Q9Y217 621 aa7.84□□□□□ -1.15
PVT1-217ENST00000523190 H7C1D1 291 aa7.83□□□□□ -1.16
PVT1-217ENST00000523190 TULP1O00294 542 aaPredicted RBP7.83□□□□□ -1.16
PVT1-217ENST00000523190 CDKL5O76039 1030 aa7.83□□□□□ -1.16
PVT1-217ENST00000523190 GDF11O95390 407 aa7.83□□□□□ -1.16
PVT1-217ENST00000523190 PLEKHA8P1O95397 391 aa7.83□□□□□ -1.16
PVT1-217ENST00000523190 F13A1P00488 732 aa7.83□□□□□ -1.16
PVT1-217ENST00000523190 CALM1P0DP23 149 aa7.83□□□□□ -1.16
PVT1-217ENST00000523190 CALM2P0DP24 149 aa7.83□□□□□ -1.16
PVT1-217ENST00000523190 CALM3P0DP25 149 aa7.83□□□□□ -1.16
PVT1-217ENST00000523190 PDCP20941 246 aa7.83□□□□□ -1.16
PVT1-217ENST00000523190 EPS15P42566 896 aa7.83□□□□□ -1.16
PVT1-217ENST00000523190 TNNI2P48788 182 aa7.83□□□□□ -1.16
PVT1-217ENST00000523190 TROAPQ12815 778 aa7.83□□□□□ -1.16
PVT1-217ENST00000523190 NTRK3Q16288 839 aa7.83□□□□□ -1.16
PVT1-217ENST00000523190 CERKLQ49MI3 558 aaPredicted RBP7.83□□□□□ -1.16
PVT1-217ENST00000523190 FKBP1CQ5VVH2 108 aa7.83□□□□□ -1.16
PVT1-217ENST00000523190 RASGRP2Q7LDG7 609 aa7.83□□□□□ -1.16
PVT1-217ENST00000523190 FAM83AQ86UY5 434 aa7.83□□□□□ -1.16
PVT1-217ENST00000523190 METTL16Q86W50 562 aaKnown RBP7.83□□□□□ -1.16
PVT1-217ENST00000523190 FOXP4Q8IVH2 680 aaPredicted RBP7.83□□□□□ -1.16
PVT1-217ENST00000523190 CMTR1Q8N1G2 835 aaKnown RBP7.83□□□□□ -1.16
PVT1-217ENST00000523190 FANCBQ8NB91 859 aa7.83□□□□□ -1.16
PVT1-217ENST00000523190 PNMA1Q8ND90 353 aa7.83□□□□□ -1.16
PVT1-217ENST00000523190 CHAMP1Q96JM3 812 aa7.83□□□□□ -1.16
PVT1-217ENST00000523190 CCDC17Q96LX7 622 aa7.83□□□□□ -1.16
PVT1-217ENST00000523190 AIFM3Q96NN9 605 aa7.83□□□□□ -1.16
PVT1-217ENST00000523190 TMEM47Q9BQJ4 181 aa7.83□□□□□ -1.16
PVT1-217ENST00000523190 SLC26A6Q9BXS9 759 aa7.83□□□□□ -1.16
PVT1-217ENST00000523190 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.83□□□□□ -1.161e-8■□□□□ 9.5
PVT1-217ENST00000523190 HACL1Q9UJ83 578 aa7.83□□□□□ -1.16
PVT1-217ENST00000523190 MTMR7Q9Y216 660 aa7.83□□□□□ -1.16
PVT1-217ENST00000523190 GREB1LQ9C091 1923 aaPredicted RBP7.83□□□□□ -1.16
PVT1-217ENST00000523190 STK36Q9NRP7 1315 aa7.82□□□□□ -1.16
PVT1-217ENST00000523190 CCDC196A0A1B0GTZ2 297 aa7.82□□□□□ -1.16
PVT1-217ENST00000523190 UBE2Q2LH0YL09 131 aa7.82□□□□□ -1.16
PVT1-217ENST00000523190 H3BQV1 296 aa7.82□□□□□ -1.16
PVT1-217ENST00000523190 BAG4O95429 457 aaKnown RBP7.82□□□□□ -1.16
PVT1-217ENST00000523190 FMNL1O95466 1100 aaPredicted RBP7.82□□□□□ -1.16
PVT1-217ENST00000523190 TOP1P11387 765 aaKnown RBP7.82□□□□□ -1.16
PVT1-217ENST00000523190 IFNAR1P17181 557 aa7.82□□□□□ -1.16
PVT1-217ENST00000523190 NOVP48745 357 aa7.82□□□□□ -1.16
PVT1-217ENST00000523190 GUCY1B3Q02153 619 aa7.82□□□□□ -1.16
PVT1-217ENST00000523190 SSRP1Q08945 709 aaKnown RBP7.82□□□□□ -1.16
PVT1-217ENST00000523190 TNFAIP1Q13829 316 aa7.82□□□□□ -1.16
PVT1-217ENST00000523190 RASA3Q14644 834 aa7.82□□□□□ -1.16
PVT1-217ENST00000523190 RRP1BQ14684 758 aaKnown RBP7.82□□□□□ -1.16
PVT1-217ENST00000523190 GRM4Q14833 912 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms