RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 OTUD7AQ8TE49 926 aaPredicted RBP14.92□□□□□ -0.02
VEGFA-223ENST00000523125 PXYLP1Q8TE99 480 aa14.92□□□□□ -0.02
VEGFA-223ENST00000523125 COA7Q96BR5 231 aa14.92□□□□□ -0.02
VEGFA-223ENST00000523125 SHISA4Q96DD7 197 aa14.92□□□□□ -0.02
VEGFA-223ENST00000523125 YTHDC1Q96MU7 727 aaKnown RBP14.92□□□□□ -0.02
VEGFA-223ENST00000523125 CABP5Q9NP86 173 aa14.92□□□□□ -0.02
VEGFA-223ENST00000523125 GJD2Q9UKL4 321 aa14.92□□□□□ -0.02
VEGFA-223ENST00000523125 GREB1LQ9C091 1923 aaPredicted RBP14.92□□□□□ -0.02
VEGFA-223ENST00000523125 A0A1W2PRG0 241 aa14.91□□□□□ -0.02
VEGFA-223ENST00000523125 USP17L12C9JPN9 530 aa14.91□□□□□ -0.02
VEGFA-223ENST00000523125 USP17L21D6R901 530 aa14.91□□□□□ -0.02
VEGFA-223ENST00000523125 CCL5P13501 91 aa14.91□□□□□ -0.02
VEGFA-223ENST00000523125 PRPF38BQ5VTL8 546 aaKnown RBP14.91□□□□□ -0.02
VEGFA-223ENST00000523125 GPATCH3Q96I76 525 aa14.91□□□□□ -0.02
VEGFA-223ENST00000523125 STRBPQ96SI9 672 aaKnown RBP14.91□□□□□ -0.02
VEGFA-223ENST00000523125 FEZ1Q99689 392 aa14.91□□□□□ -0.02
VEGFA-223ENST00000523125 TAOK2Q9UL54 1235 aa14.91□□□□□ -0.02
VEGFA-223ENST00000523125 SLC4A4Q9Y6R1 1079 aa14.91□□□□□ -0.02
VEGFA-223ENST00000523125 VCAM1P19320 739 aa14.9□□□□□ -0.02
VEGFA-223ENST00000523125 USP14P54578 494 aa14.9□□□□□ -0.02
VEGFA-223ENST00000523125 Q3C1V9 767 aa14.9□□□□□ -0.02
VEGFA-223ENST00000523125 CTR9Q6PD62 1173 aa14.9□□□□□ -0.02
VEGFA-223ENST00000523125 SIAH1Q8IUQ4 282 aa14.9□□□□□ -0.02
VEGFA-223ENST00000523125 GPRC5AQ8NFJ5 357 aa14.9□□□□□ -0.02
VEGFA-223ENST00000523125 PI4K2BQ8TCG2 481 aa14.9□□□□□ -0.02
VEGFA-223ENST00000523125 OSBP2Q969R2 916 aa14.9□□□□□ -0.02
VEGFA-223ENST00000523125 BIN2Q9UBW5 565 aaPredicted RBP14.9□□□□□ -0.02
VEGFA-223ENST00000523125 SWAP70Q9UH65 585 aa14.9□□□□□ -0.02
VEGFA-223ENST00000523125 TTC41PQ6P2S7 1318 aa14.9□□□□□ -0.02
VEGFA-223ENST00000523125 SALL3Q9BXA9 1300 aa14.9□□□□□ -0.02
VEGFA-223ENST00000523125 A0A0G2JMZ2 1700 aa14.89□□□□□ -0.03
VEGFA-223ENST00000523125 USP17L15C9J2P7 530 aa14.89□□□□□ -0.03
VEGFA-223ENST00000523125 USP17L13C9JLJ4 530 aa14.89□□□□□ -0.03
VEGFA-223ENST00000523125 USP17L11C9JVI0 530 aa14.89□□□□□ -0.03
VEGFA-223ENST00000523125 USP17L18D6R9N7 530 aa14.89□□□□□ -0.03
VEGFA-223ENST00000523125 USP17L22D6RA61 530 aa14.89□□□□□ -0.03
VEGFA-223ENST00000523125 USP17L17D6RBQ6 530 aa14.89□□□□□ -0.03
VEGFA-223ENST00000523125 USP17L19D6RCP7 530 aa14.89□□□□□ -0.03
VEGFA-223ENST00000523125 USP17L20D6RJB6 530 aa14.89□□□□□ -0.03
VEGFA-223ENST00000523125 MPHOSPH10O00566 681 aaKnown RBP14.89□□□□□ -0.03
VEGFA-223ENST00000523125 RNF113AO15541 343 aaKnown RBP14.89□□□□□ -0.03
VEGFA-223ENST00000523125 INHAP05111 366 aa14.89□□□□□ -0.03
VEGFA-223ENST00000523125 GJB1P08034 283 aa14.89□□□□□ -0.03
VEGFA-223ENST00000523125 GJA8P48165 433 aa14.89□□□□□ -0.03
VEGFA-223ENST00000523125 CDK8P49336 464 aa14.89□□□□□ -0.03
VEGFA-223ENST00000523125 ERVK-9P63128 1117 aa14.89□□□□□ -0.03
VEGFA-223ENST00000523125 ERVK-24P63145 666 aa14.89□□□□□ -0.03
VEGFA-223ENST00000523125 UBXN2AP68543 259 aa14.89□□□□□ -0.03
VEGFA-223ENST00000523125 USP17L24Q0WX57 530 aa14.89□□□□□ -0.03
VEGFA-223ENST00000523125 CATSPERGQ6ZRH7 1159 aa14.89□□□□□ -0.03
VEGFA-223ENST00000523125 C16orf86Q6ZW13 317 aa14.89□□□□□ -0.03
VEGFA-223ENST00000523125 RNF208Q9H0X6 261 aa14.89□□□□□ -0.03
VEGFA-223ENST00000523125 UNC93B1Q9H1C4 597 aa14.89□□□□□ -0.03
VEGFA-223ENST00000523125 COL11A1P12107 1806 aaPredicted RBP14.89□□□□□ -0.03
VEGFA-223ENST00000523125 GSG1L2A8MUP6 293 aa14.88□□□□□ -0.03
VEGFA-223ENST00000523125 CNMDO75829 334 aa14.88□□□□□ -0.03
VEGFA-223ENST00000523125 AKR1B1P15121 316 aa14.88□□□□□ -0.03
VEGFA-223ENST00000523125 KIAA1755Q5JYT7 1200 aa14.88□□□□□ -0.03
VEGFA-223ENST00000523125 TMEM179Q6ZVK1 233 aa14.88□□□□□ -0.03
VEGFA-223ENST00000523125 CLEC10AQ8IUN9 316 aa14.88□□□□□ -0.03
VEGFA-223ENST00000523125 APPBP2Q92624 585 aa14.88□□□□□ -0.03
VEGFA-223ENST00000523125 PORCNQ9H237 461 aa14.88□□□□□ -0.03
VEGFA-223ENST00000523125 ZNFX1Q9P2E3 1918 aaKnown RBP14.88□□□□□ -0.03
VEGFA-223ENST00000523125 MYH4Q9Y623 1939 aa14.88□□□□□ -0.03
VEGFA-223ENST00000523125 LBX2Q6XYB7 198 aa14.87□□□□□ -0.03
VEGFA-223ENST00000523125 UBE2Q1Q7Z7E8 422 aa14.87□□□□□ -0.03
VEGFA-223ENST00000523125 GTF3C2Q8WUA4 911 aaPredicted RBP14.87□□□□□ -0.03
VEGFA-223ENST00000523125 CCDC17Q96LX7 622 aa14.87□□□□□ -0.03
VEGFA-223ENST00000523125 PAGR1Q9BTK6 254 aa14.87□□□□□ -0.03
VEGFA-223ENST00000523125 RPAP3Q9H6T3 665 aaPredicted RBP14.87□□□□□ -0.03
VEGFA-223ENST00000523125 RABGAP1Q9Y3P9 1069 aa14.87□□□□□ -0.03
VEGFA-223ENST00000523125 SPDYE16A6NNV3 312 aaPredicted RBP14.86□□□□□ -0.03
VEGFA-223ENST00000523125 M0R2C6 588 aa14.86□□□□□ -0.03
VEGFA-223ENST00000523125 GLRX3O76003 335 aaKnown RBP14.86□□□□□ -0.03
VEGFA-223ENST00000523125 ZFYP08048 801 aaPredicted RBP14.86□□□□□ -0.03
VEGFA-223ENST00000523125 MX1P20591 662 aa14.86□□□□□ -0.03
VEGFA-223ENST00000523125 MAPK4P31152 587 aa14.86□□□□□ -0.03
VEGFA-223ENST00000523125 HDAC1Q13547 482 aaPredicted RBP14.86□□□□□ -0.03
VEGFA-223ENST00000523125 SBK1Q52WX2 424 aa14.86□□□□□ -0.03
VEGFA-223ENST00000523125 GIMAP6Q6P9H5 292 aa14.86□□□□□ -0.03
VEGFA-223ENST00000523125 NKX2-3Q8TAU0 364 aa14.86□□□□□ -0.03
VEGFA-223ENST00000523125 U2AF1L4Q8WU68 220 aaKnown RBP14.86□□□□□ -0.03
VEGFA-223ENST00000523125 USP6NLQ92738 828 aa14.86□□□□□ -0.03
VEGFA-223ENST00000523125 DDRGK1Q96HY6 314 aa14.86□□□□□ -0.03
VEGFA-223ENST00000523125 PAK6Q9NQU5 681 aaPredicted RBP14.86□□□□□ -0.03
VEGFA-223ENST00000523125 BTBD7Q9P203 1132 aa14.86□□□□□ -0.03
VEGFA-223ENST00000523125 ERC2O15083 957 aa14.85□□□□□ -0.03
VEGFA-223ENST00000523125 GPAA1O43292 621 aa14.85□□□□□ -0.03
VEGFA-223ENST00000523125 SGPL1O95470 568 aa14.85□□□□□ -0.03
VEGFA-223ENST00000523125 TRIM32Q13049 653 aa14.85□□□□□ -0.03
VEGFA-223ENST00000523125 MORN1Q5T089 497 aa14.85□□□□□ -0.03
VEGFA-223ENST00000523125 ANKRD45Q5TZF3 282 aa14.85□□□□□ -0.03
VEGFA-223ENST00000523125 GPR142Q7Z601 462 aa14.85□□□□□ -0.03
VEGFA-223ENST00000523125 AMOTL1Q8IY63 956 aa14.85□□□□□ -0.03
VEGFA-223ENST00000523125 SEC62Q99442 399 aaKnown RBP14.85□□□□□ -0.03
VEGFA-223ENST00000523125 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.85□□□□□ -0.03
VEGFA-223ENST00000523125 EPB41L4AQ9HCS5 686 aaPredicted RBP14.85□□□□□ -0.03
VEGFA-223ENST00000523125 ARPP21Q9UBL0 812 aaPredicted RBP14.85□□□□□ -0.03
VEGFA-223ENST00000523125 TMX2Q9Y320 296 aa14.85□□□□□ -0.03
VEGFA-223ENST00000523125 ALPK3Q96L96 1907 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms