RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 CALM1P0DP23 149 aa17.98■□□□□ 0.47
CTNNA1-236ENST00000522792 CALM2P0DP24 149 aa17.98■□□□□ 0.47
CTNNA1-236ENST00000522792 CALM3P0DP25 149 aa17.98■□□□□ 0.47
CTNNA1-236ENST00000522792 IFNAR1P17181 557 aa17.98■□□□□ 0.47
CTNNA1-236ENST00000522792 GMPSP49915 693 aaPredicted RBP17.98■□□□□ 0.47
CTNNA1-236ENST00000522792 SSRP1Q08945 709 aaKnown RBP17.98■□□□□ 0.47
CTNNA1-236ENST00000522792 FAM173BQ6P4H8 233 aa17.98■□□□□ 0.47
CTNNA1-236ENST00000522792 PNMA1Q8ND90 353 aa17.98■□□□□ 0.47
CTNNA1-236ENST00000522792 CEP95Q96GE4 821 aa17.98■□□□□ 0.47
CTNNA1-236ENST00000522792 C8orf76Q96K31 380 aa17.98■□□□□ 0.47
CTNNA1-236ENST00000522792 GDPD2Q9HCC8 539 aa17.98■□□□□ 0.47
CTNNA1-236ENST00000522792 PI4KBQ9UBF8 816 aa17.98■□□□□ 0.47
CTNNA1-236ENST00000522792 MTMR7Q9Y216 660 aa17.98■□□□□ 0.47
CTNNA1-236ENST00000522792 PLEKHA8P1O95397 391 aa17.98■□□□□ 0.47
CTNNA1-236ENST00000522792 FMNL1O95466 1100 aaPredicted RBP17.98■□□□□ 0.47
CTNNA1-236ENST00000522792 SPDYE2Q495Y8 402 aa17.98■□□□□ 0.47
CTNNA1-236ENST00000522792 RBM26Q5T8P6 1007 aaKnown RBP17.98■□□□□ 0.47
CTNNA1-236ENST00000522792 ANKS1AQ92625 1134 aa17.98■□□□□ 0.47
CTNNA1-236ENST00000522792 TMEM47Q9BQJ4 181 aa17.98■□□□□ 0.47
CTNNA1-236ENST00000522792 ALG1Q9BT22 464 aa17.98■□□□□ 0.47
CTNNA1-236ENST00000522792 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.98■□□□□ 0.47
CTNNA1-236ENST00000522792 CNPY2Q9Y2B0 182 aa17.98■□□□□ 0.47
CTNNA1-236ENST00000522792 ATP6V1DQ9Y5K8 247 aa17.98■□□□□ 0.47
CTNNA1-236ENST00000522792 PRPF40AO75400 957 aaKnown RBP17.97■□□□□ 0.47
CTNNA1-236ENST00000522792 NCLP19338 710 aaKnown RBP17.97■□□□□ 0.47
CTNNA1-236ENST00000522792 DNM1Q05193 864 aaKnown RBP17.97■□□□□ 0.47
CTNNA1-236ENST00000522792 RESTQ13127 1097 aa17.97■□□□□ 0.47
CTNNA1-236ENST00000522792 NBPF9Q3BBW0 867 aa17.97■□□□□ 0.47
CTNNA1-236ENST00000522792 NBPF11Q86T75 865 aa17.97■□□□□ 0.47
CTNNA1-236ENST00000522792 MTMR14Q8NCE2 650 aa17.97■□□□□ 0.47
CTNNA1-236ENST00000522792 CTCFLQ8NI51 663 aaPredicted RBP17.97■□□□□ 0.47
CTNNA1-236ENST00000522792 TRIM34Q9BYJ4 488 aa17.97■□□□□ 0.47
CTNNA1-236ENST00000522792 MPHOSPH10O00566 681 aaKnown RBP17.96■□□□□ 0.47
CTNNA1-236ENST00000522792 EGFRP00533 1210 aa17.96■□□□□ 0.47
CTNNA1-236ENST00000522792 RPS12P25398 132 aaKnown RBP17.96■□□□□ 0.47
CTNNA1-236ENST00000522792 CLEC10AQ8IUN9 316 aa17.96■□□□□ 0.47
CTNNA1-236ENST00000522792 RBM28Q9NW13 759 aaKnown RBP17.96■□□□□ 0.47
CTNNA1-236ENST00000522792 ATRNL1Q5VV63 1379 aa17.96■□□□□ 0.47
CTNNA1-236ENST00000522792 STK36Q9NRP7 1315 aa17.96■□□□□ 0.47
CTNNA1-236ENST00000522792 WNT10BO00744 389 aa17.96■□□□□ 0.47
CTNNA1-236ENST00000522792 TRAK2O60296 914 aa17.96■□□□□ 0.47
CTNNA1-236ENST00000522792 GUCY1A2P33402 732 aa17.96■□□□□ 0.47
CTNNA1-236ENST00000522792 MICALL2Q8IY33 904 aa17.96■□□□□ 0.47
CTNNA1-236ENST00000522792 TRIM22Q8IYM9 498 aa17.96■□□□□ 0.47
CTNNA1-236ENST00000522792 ZBED3Q96IU2 234 aaPredicted RBP17.96■□□□□ 0.47
CTNNA1-236ENST00000522792 CSRNP1Q96S65 589 aa17.96■□□□□ 0.47
CTNNA1-236ENST00000522792 LMBRD1Q9NUN5 540 aa17.96■□□□□ 0.47
CTNNA1-236ENST00000522792 CNTNAP1P78357 1384 aa17.95■□□□□ 0.46
CTNNA1-236ENST00000522792 PLIN4Q96Q06 1357 aa17.95■□□□□ 0.46
CTNNA1-236ENST00000522792 MYO1BO43795 1136 aa17.95■□□□□ 0.46
CTNNA1-236ENST00000522792 LMNB1P20700 586 aa17.95■□□□□ 0.46
CTNNA1-236ENST00000522792 ZNF280AP59817 542 aaPredicted RBP17.95■□□□□ 0.46
CTNNA1-236ENST00000522792 PPP2R5BQ15173 497 aa17.95■□□□□ 0.46
CTNNA1-236ENST00000522792 SHROOM1Q2M3G4 852 aaPredicted RBP17.94■□□□□ 0.46
CTNNA1-236ENST00000522792 TMTC3Q6ZXV5 915 aa17.94■□□□□ 0.46
CTNNA1-236ENST00000522792 RASGRP2Q7LDG7 609 aa17.94■□□□□ 0.46
CTNNA1-236ENST00000522792 FBXO18Q8NFZ0 1043 aa17.94■□□□□ 0.46
CTNNA1-236ENST00000522792 FAM151AQ8WW52 585 aa17.94■□□□□ 0.46
CTNNA1-236ENST00000522792 SCAF8Q9UPN6 1271 aaKnown RBP17.94■□□□□ 0.46
CTNNA1-236ENST00000522792 COL2A1P02458 1487 aaPredicted RBP17.94■□□□□ 0.46
CTNNA1-236ENST00000522792 hCG_1642624A0A1W2PR95 340 aa17.94■□□□□ 0.46
CTNNA1-236ENST00000522792 FIBPO43427 364 aa17.94■□□□□ 0.46
CTNNA1-236ENST00000522792 YBX3P16989 372 aaKnown RBP eCLIP17.94■□□□□ 0.465e-8■□□□□ 9.1
CTNNA1-236ENST00000522792 PTMSP20962 102 aa17.94■□□□□ 0.46
CTNNA1-236ENST00000522792 SAMD7Q7Z3H4 446 aa17.94■□□□□ 0.46
CTNNA1-236ENST00000522792 FOXP4Q8IVH2 680 aaPredicted RBP17.94■□□□□ 0.46
CTNNA1-236ENST00000522792 MTMR4Q9NYA4 1195 aa17.94■□□□□ 0.46
CTNNA1-236ENST00000522792 CNOT7Q9UIV1 285 aaKnown RBP17.94■□□□□ 0.46
CTNNA1-236ENST00000522792 IGKV6D-41A0A0C4DH26 115 aa17.93■□□□□ 0.46
CTNNA1-236ENST00000522792 TOP1P11387 765 aaKnown RBP17.93■□□□□ 0.46
CTNNA1-236ENST00000522792 FUT2Q10981 343 aa17.93■□□□□ 0.46
CTNNA1-236ENST00000522792 CERKLQ49MI3 558 aaPredicted RBP17.93■□□□□ 0.46
CTNNA1-236ENST00000522792 TBC1D10BQ4KMP7 808 aaPredicted RBP17.93■□□□□ 0.46
CTNNA1-236ENST00000522792 CDAN1Q8IWY9 1227 aa17.93■□□□□ 0.46
CTNNA1-236ENST00000522792 SRBD1Q8N5C6 995 aaKnown RBP17.93■□□□□ 0.46
CTNNA1-236ENST00000522792 TMEM39BQ9GZU3 492 aa17.93■□□□□ 0.46
CTNNA1-236ENST00000522792 KIF5BP33176 963 aa17.93■□□□□ 0.46
CTNNA1-236ENST00000522792 GRM4Q14833 912 aa17.93■□□□□ 0.46
CTNNA1-236ENST00000522792 LRRC47Q8N1G4 583 aaKnown RBP17.93■□□□□ 0.46
CTNNA1-236ENST00000522792 STAG2Q8N3U4 1231 aa17.93■□□□□ 0.46
CTNNA1-236ENST00000522792 DPF2Q92785 391 aa17.93■□□□□ 0.46
CTNNA1-236ENST00000522792 ZSCAN16Q9H4T2 348 aaPredicted RBP17.93■□□□□ 0.46
CTNNA1-236ENST00000522792 TCHHQ07283 1943 aa17.92■□□□□ 0.46
CTNNA1-236ENST00000522792 UTRNP46939 3433 aa17.92■□□□□ 0.46
CTNNA1-236ENST00000522792 CNTNAP5Q8WYK1 1306 aa17.92■□□□□ 0.46
CTNNA1-236ENST00000522792 GDF11O95390 407 aa17.92■□□□□ 0.46
CTNNA1-236ENST00000522792 DEXIO95424 95 aa17.92■□□□□ 0.46
CTNNA1-236ENST00000522792 NOVP48745 357 aa17.92■□□□□ 0.46
CTNNA1-236ENST00000522792 AKAP17AQ02040 695 aaKnown RBP17.92■□□□□ 0.46
CTNNA1-236ENST00000522792 KRT40Q6A162 431 aa17.92■□□□□ 0.46
CTNNA1-236ENST00000522792 TATDN1Q6P1N9 297 aa17.92■□□□□ 0.46
CTNNA1-236ENST00000522792 USP48Q86UV5 1035 aa17.92■□□□□ 0.46
CTNNA1-236ENST00000522792 PIBF1Q8WXW3 757 aa17.92■□□□□ 0.46
CTNNA1-236ENST00000522792 WASF1Q92558 559 aa17.92■□□□□ 0.46
CTNNA1-236ENST00000522792 RNF26Q9BY78 433 aaPredicted RBP17.92■□□□□ 0.46
CTNNA1-236ENST00000522792 V9GY48 417 aaPredicted RBP17.92■□□□□ 0.46
CTNNA1-236ENST00000522792 ATP2B2Q01814 1243 aa17.91■□□□□ 0.46
CTNNA1-236ENST00000522792 TRIM29Q14134 588 aa17.91■□□□□ 0.46
CTNNA1-236ENST00000522792 CCDC17Q96LX7 622 aa17.91■□□□□ 0.46
CTNNA1-236ENST00000522792 TFIP11Q9UBB9 837 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms