RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	CYLC1	P35663	651 aa	Predicted RBP	11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	CRKL	P46109	303 aa	Known RBP	11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	GABPA	Q06546	454 aa		11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	ZYX	Q15942	572 aa	Known RBP	11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	KLHL10	Q6JEL2	608 aa		11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	NDUFAF2	Q8N183	169 aa		11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	FSIP1	Q8NA03	581 aa		11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	INTS4	Q96HW7	963 aa	Known RBP	11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	NT5C3A	Q9H0P0	336 aa		11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	MAP3K15	Q6ZN16	1313 aa		11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	PCCA	P05165	728 aa	Predicted RBP	11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	SFSWAP	Q12872	951 aa	Known RBP	11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	URGCP	Q8TCY9	931 aa		11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	DDX23	Q9BUQ8	820 aa	Known RBP	11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	STMN4	Q9H169	189 aa	Predicted RBP	11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	POLK	Q9UBT6	870 aa		11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	CCPG1	Q9ULG6	757 aa		11.5	□□□□□ -0.57
TCF7-223	ENST00000522653	ICA1	Q05084	483 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	CLUL1	Q15846	466 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	ATL3	Q6DD88	541 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	GALNT17	Q6IS24	598 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	RUFY4	Q6ZNE9	571 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	MIGA1	Q8NAN2	632 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	IFT122	Q9HBG6	1241 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	NR2E3	Q9Y5X4	410 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	IFFO1	Q0D2I5	559 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	PLCB4	Q15147	1175 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	APPBP2	Q92624	585 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	ATP6V0A1	Q93050	837 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	FAM89A	Q96GI7	184 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	HOXC10	Q9NYD6	342 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	CTAGE15	A4D2H0	777 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	hCG_1984214	I3L0E3	225 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	USP17L8	P0C7I0	530 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	CTAGE8	P0CG41	777 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	MAP2K1	Q02750	393 aa	Predicted RBP	11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	BRAP	Q7Z569	592 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	CTAGE6	Q86UF2	777 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	CTAGE4	Q8IX94	777 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	SLFN12	Q8IYM2	578 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	DNM3	Q9UQ16	869 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	A2ML1	A8K2U0	1454 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	ARHGEF5	Q12774	1597 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	F13A1	P00488	732 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	CCND2	P30279	289 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	SPATA5	Q8NB90	893 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	HELB	Q8NG08	1087 aa	Predicted RBP	11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	MED10	Q9BTT4	135 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	EDEM3	Q9BZQ6	932 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	NUB1	Q9Y5A7	615 aa		11.49	□□□□□ -0.57
TCF7-223	ENST00000522653	DEXI	O95424	95 aa		11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	MMP10	P09238	476 aa		11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	ALAS1	P13196	640 aa		11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	BCAM	P50895	628 aa		11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	TCP10	Q12799	353 aa		11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	NONO	Q15233	471 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	MIS18BP1	Q6P0N0	1132 aa		11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	YAF2	Q8IY57	180 aa		11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	RNF169	Q8NCN4	708 aa		11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	ZNF804B	A4D1E1	1349 aa		11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	FAM135B	Q49AJ0	1406 aa		11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	DONSON	Q9NYP3	566 aa		11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	MLH3	Q9UHC1	1453 aa		11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	GIPC1	O14908	333 aa		11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	ANXA13	P27216	316 aa		11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	VPS72	Q15906	364 aa		11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	PPP1R2P3	Q6NXS1	205 aa		11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	FOXP4	Q8IVH2	680 aa	Predicted RBP	11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	PARK7	Q99497	189 aa	Known RBP	11.48	□□□□□ -0.57
TCF7-223	ENST00000522653		A0A1B0GUA9	196 aa		11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	EEF2	P13639	858 aa	Known RBP	11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	ALDH3A1	P30838	453 aa		11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	METTL13	Q8N6R0	699 aa		11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	LEO1	Q8WVC0	666 aa	Predicted RBP	11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	TEKT3	Q9BXF9	490 aa		11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	TMX1	Q9H3N1	280 aa		11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	ZSWIM4	Q9H7M6	989 aa		11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	TFIP11	Q9UBB9	837 aa	Known RBP	11.48	□□□□□ -0.57
TCF7-223	ENST00000522653	ZBBX	A8MT70	800 aa		11.47	□□□□□ -0.57
TCF7-223	ENST00000522653	CKAP4	Q07065	602 aa	Known RBP	11.47	□□□□□ -0.57
TCF7-223	ENST00000522653	HDX	Q7Z353	690 aa		11.47	□□□□□ -0.57
TCF7-223	ENST00000522653	FAM204A	Q9H8W3	233 aa		11.47	□□□□□ -0.57
TCF7-223	ENST00000522653	GMNN	O75496	209 aa		11.47	□□□□□ -0.57
TCF7-223	ENST00000522653	MAGI3	Q5TCQ9	1506 aa		11.47	□□□□□ -0.57
TCF7-223	ENST00000522653	OPA1	O60313	960 aa		11.47	□□□□□ -0.57
TCF7-223	ENST00000522653	CFB	P00751	764 aa		11.47	□□□□□ -0.57
TCF7-223	ENST00000522653	AMN	Q9BXJ7	453 aa		11.47	□□□□□ -0.57
TCF7-223	ENST00000522653	CCT2	P78371	535 aa	Known RBP	11.47	□□□□□ -0.57
TCF7-223	ENST00000522653	C6orf163	Q5TEZ5	329 aa		11.47	□□□□□ -0.57
TCF7-223	ENST00000522653	SYT10	Q6XYQ8	523 aa		11.47	□□□□□ -0.57
TCF7-223	ENST00000522653	IQUB	Q8NA54	791 aa		11.47	□□□□□ -0.57
TCF7-223	ENST00000522653	FAM81B	Q96LP2	452 aa		11.47	□□□□□ -0.57
TCF7-223	ENST00000522653	TESK2	Q96S53	571 aa		11.47	□□□□□ -0.57
TCF7-223	ENST00000522653	NCAPG	Q9BPX3	1015 aa		11.47	□□□□□ -0.57
TCF7-223	ENST00000522653	ANGEL1	Q9UNK9	670 aa	Known RBP	11.47	□□□□□ -0.57
TCF7-223	ENST00000522653	HSF2BP	O75031	334 aa		11.46	□□□□□ -0.57
TCF7-223	ENST00000522653	N4BP1	O75113	896 aa	Known RBP	11.46	□□□□□ -0.57
TCF7-223	ENST00000522653	CNNM4	Q6P4Q7	775 aa		11.46	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms