RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 GNAT2P19087 354 aa21.37■■□□□ 1.01
CLK4-211ENST00000522556 SDSP20132 328 aa21.37■■□□□ 1.01
CLK4-211ENST00000522556 TTC22Q5TAA0 569 aa21.37■■□□□ 1.01
CLK4-211ENST00000522556 CABP5Q9NP86 173 aa21.37■■□□□ 1.01
CLK4-211ENST00000522556 TACC3Q9Y6A5 838 aa21.37■■□□□ 1.01
CLK4-211ENST00000522556 HTTP42858 3142 aa21.37■■□□□ 1.01
CLK4-211ENST00000522556 RASA1P20936 1047 aa21.36■■□□□ 1.01
CLK4-211ENST00000522556 SIAH1Q8IUQ4 282 aa21.36■■□□□ 1.01
CLK4-211ENST00000522556 AMOTL1Q8IY63 956 aa21.36■■□□□ 1.01
CLK4-211ENST00000522556 ERO1AQ96HE7 468 aa21.36■■□□□ 1.01
CLK4-211ENST00000522556 FEZ1Q99689 392 aa21.36■■□□□ 1.01
CLK4-211ENST00000522556 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.36■■□□□ 1.01
CLK4-211ENST00000522556 ASCC2Q9H1I8 757 aaPredicted RBP21.36■■□□□ 1.01
CLK4-211ENST00000522556 IL25Q9H293 177 aa21.36■■□□□ 1.01
CLK4-211ENST00000522556 HELLSQ9NRZ9 838 aa21.36■■□□□ 1.01
CLK4-211ENST00000522556 SLC45A1Q9Y2W3 748 aa21.36■■□□□ 1.01
CLK4-211ENST00000522556 PRDM1O75626 825 aa21.35■■□□□ 1.01
CLK4-211ENST00000522556 KIAA1755Q5JYT7 1200 aa21.35■■□□□ 1.01
CLK4-211ENST00000522556 LACTBP83111 547 aaPredicted RBP21.34■■□□□ 1.01
CLK4-211ENST00000522556 MCMDC2Q4G0Z9 681 aa21.34■■□□□ 1.01
CLK4-211ENST00000522556 POTEEQ6S8J3 1075 aa21.34■■□□□ 1.01
CLK4-211ENST00000522556 TMEM179Q6ZVK1 233 aa21.34■■□□□ 1.01
CLK4-211ENST00000522556 NAPBQ9H115 298 aa21.34■■□□□ 1.01
CLK4-211ENST00000522556 INCENPQ9NQS7 918 aa21.34■■□□□ 1.01
CLK4-211ENST00000522556 TMOD4Q9NZQ9 345 aa21.34■■□□□ 1.01
CLK4-211ENST00000522556 C19orf81C9J6K1 198 aa21.33■■□□□ 1.01
CLK4-211ENST00000522556 CTDSPL2Q05D32 466 aa21.33■■□□□ 1.01
CLK4-211ENST00000522556 PPARAQ07869 468 aa21.33■■□□□ 1.01
CLK4-211ENST00000522556 USP17L2Q6R6M4 530 aa21.33■■□□□ 1.01
CLK4-211ENST00000522556 ANKRD13CQ8N6S4 541 aa21.33■■□□□ 1.01
CLK4-211ENST00000522556 SMCR8Q8TEV9 937 aaPredicted RBP21.33■■□□□ 1.01
CLK4-211ENST00000522556 KIAA1683Q9H0B3 1180 aa21.33■■□□□ 1.01
CLK4-211ENST00000522556 EFCC1Q9HA90 598 aa21.33■■□□□ 1.01
CLK4-211ENST00000522556 HPS5Q9UPZ3 1129 aa21.33■■□□□ 1.01
CLK4-211ENST00000522556 CCDC171Q6TFL3 1326 aa21.32■■□□□ 1
CLK4-211ENST00000522556 RLFQ13129 1914 aa21.32■■□□□ 1
CLK4-211ENST00000522556 VCAM1P19320 739 aa21.32■■□□□ 1
CLK4-211ENST00000522556 ICA1Q05084 483 aa21.32■■□□□ 1
CLK4-211ENST00000522556 CWC27Q6UX04 472 aaKnown RBP21.32■■□□□ 1
CLK4-211ENST00000522556 TRIM47Q96LD4 638 aa21.32■■□□□ 1
CLK4-211ENST00000522556 C12orf42Q96LP6 360 aa21.32■■□□□ 1
CLK4-211ENST00000522556 NACAP1Q9BZK3 213 aa21.32■■□□□ 1
CLK4-211ENST00000522556 PARP14Q460N5 1801 aa21.32■■□□□ 1
CLK4-211ENST00000522556 MYH4Q9Y623 1939 aa21.31■■□□□ 1
CLK4-211ENST00000522556 FBXO46Q6PJ61 603 aaPredicted RBP21.31■■□□□ 1
CLK4-211ENST00000522556 CCDC17Q96LX7 622 aa21.31■■□□□ 1
CLK4-211ENST00000522556 P2RX7Q99572 595 aaKnown RBP21.31■■□□□ 1
CLK4-211ENST00000522556 LAMA4Q16363 1823 aa21.31■■□□□ 1
CLK4-211ENST00000522556 DOCK3Q8IZD9 2030 aa21.3■■□□□ 1
CLK4-211ENST00000522556 CCDC85CA6NKD9 419 aa21.3■■□□□ 1
CLK4-211ENST00000522556 HSPD1P10809 573 aaKnown RBP21.3■■□□□ 1
CLK4-211ENST00000522556 EEF2P13639 858 aaKnown RBP21.3■■□□□ 1
CLK4-211ENST00000522556 HOXA7P31268 230 aaPredicted RBP21.3■■□□□ 1
CLK4-211ENST00000522556 TXNRD2Q9NNW7 524 aa21.3■■□□□ 1
CLK4-211ENST00000522556 DIAPH3Q9NSV4 1193 aa21.3■■□□□ 1
CLK4-211ENST00000522556 PTPN22Q9Y2R2 807 aa21.3■■□□□ 1
CLK4-211ENST00000522556 FGAP02671 866 aa21.29■■□□□ 1
CLK4-211ENST00000522556 PSMC4P43686 418 aa21.29■■□□□ 1
CLK4-211ENST00000522556 IRX3P78415 501 aaPredicted RBP21.29■■□□□ 1
CLK4-211ENST00000522556 NKX2-3Q8TAU0 364 aa21.29■■□□□ 1
CLK4-211ENST00000522556 NBPF3Q9H094 633 aa21.29■■□□□ 1
CLK4-211ENST00000522556 MKNK2Q9HBH9 465 aa21.29■■□□□ 1
CLK4-211ENST00000522556 PNMA3Q9UL41 463 aa21.29■■□□□ 1
CLK4-211ENST00000522556 TAOK2Q9UL54 1235 aa21.29■■□□□ 1
CLK4-211ENST00000522556 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.29■■□□□ 1
CLK4-211ENST00000522556 PTCH2Q9Y6C5 1203 aa21.29■■□□□ 1
CLK4-211ENST00000522556 OSBPP22059 807 aa21.28■■□□□ 1
CLK4-211ENST00000522556 HERVK_113P62684 666 aa21.28■■□□□ 1
CLK4-211ENST00000522556 ATP2B2Q01814 1243 aa21.28■■□□□ 1
CLK4-211ENST00000522556 FAM47AQ5JRC9 791 aa21.28■■□□□ 1
CLK4-211ENST00000522556 SPICE1Q8N0Z3 855 aa21.28■■□□□ 1
CLK4-211ENST00000522556 RPAP3Q9H6T3 665 aaPredicted RBP21.28■■□□□ 1
CLK4-211ENST00000522556 A0A0G2JMZ2 1700 aa21.28■■□□□ 1
CLK4-211ENST00000522556 IGKV6D-41A0A0C4DH26 115 aa21.27■■□□□ 1
CLK4-211ENST00000522556 HAND2P61296 217 aa21.27■■□□□ 1
CLK4-211ENST00000522556 PABPC4Q13310 644 aaKnown RBP eCLIP21.27■■□□□ 1
CLK4-211ENST00000522556 ALX1Q15699 326 aa21.27■■□□□ 1
CLK4-211ENST00000522556 PKN2Q16513 984 aaKnown RBP21.27■■□□□ 1
CLK4-211ENST00000522556 CENPQQ7L2Z9 268 aaPredicted RBP21.27■■□□□ 1
CLK4-211ENST00000522556 TMX2Q9Y320 296 aa21.27■■□□□ 1
CLK4-211ENST00000522556 PLXNB2O15031 1838 aa21.27■□□□□ 0.99
CLK4-211ENST00000522556 USP14P54578 494 aa21.26■□□□□ 0.99
CLK4-211ENST00000522556 FAM110CQ1W6H9 321 aa21.26■□□□□ 0.99
CLK4-211ENST00000522556 TICAM2Q86XR7 235 aa21.26■□□□□ 0.99
CLK4-211ENST00000522556 GABRQQ9UN88 632 aa21.26■□□□□ 0.99
CLK4-211ENST00000522556 PLIN4Q96Q06 1357 aa21.25■□□□□ 0.99
CLK4-211ENST00000522556 CNMDO75829 334 aa21.25■□□□□ 0.99
CLK4-211ENST00000522556 FMNL1O95466 1100 aaPredicted RBP21.25■□□□□ 0.99
CLK4-211ENST00000522556 KIF22Q14807 665 aa21.25■□□□□ 0.99
CLK4-211ENST00000522556 CATSPERGQ6ZRH7 1159 aa21.25■□□□□ 0.99
CLK4-211ENST00000522556 TBC1D10CQ8IV04 446 aa21.25■□□□□ 0.99
CLK4-211ENST00000522556 CEP95Q96GE4 821 aa21.25■□□□□ 0.99
CLK4-211ENST00000522556 PAGR1Q9BTK6 254 aa21.25■□□□□ 0.99
CLK4-211ENST00000522556 VCPKMTQ9H867 229 aa21.25■□□□□ 0.99
CLK4-211ENST00000522556 KANSL2Q9H9L4 492 aa21.25■□□□□ 0.99
CLK4-211ENST00000522556 ARHGEF10LQ9HCE6 1279 aa21.25■□□□□ 0.99
CLK4-211ENST00000522556 RBPJLQ9UBG7 517 aa21.25■□□□□ 0.99
CLK4-211ENST00000522556 ANAPC4Q9UJX5 808 aa21.25■□□□□ 0.99
CLK4-211ENST00000522556 COL11A1P12107 1806 aaPredicted RBP21.25■□□□□ 0.99
CLK4-211ENST00000522556 SPDYE16A6NNV3 312 aaPredicted RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms