RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 PPP4R3BQ5MIZ7 849 aa15.33■□□□□ 0.04
CPNE3-205ENST00000522240 NOL8Q76FK4 1167 aaKnown RBP15.33■□□□□ 0.04
CPNE3-205ENST00000522240 PNMA8AQ86V59 439 aaPredicted RBP15.33■□□□□ 0.04
CPNE3-205ENST00000522240 ZNF274Q96GC6 653 aaPredicted RBP15.33■□□□□ 0.04
CPNE3-205ENST00000522240 DEFB129Q9H1M3 183 aa15.33■□□□□ 0.04
CPNE3-205ENST00000522240 TAF1DQ9H5J8 278 aaPredicted RBP15.33■□□□□ 0.04
CPNE3-205ENST00000522240 TPCN1Q9ULQ1 816 aa15.33■□□□□ 0.04
CPNE3-205ENST00000522240 CHRM1P11229 460 aaPredicted RBP15.32■□□□□ 0.04
CPNE3-205ENST00000522240 VEGFAP15692 232 aaPredicted RBP15.32■□□□□ 0.04
CPNE3-205ENST00000522240 APOBRQ0VD83 1088 aa15.32■□□□□ 0.04
CPNE3-205ENST00000522240 DGKHQ86XP1 1220 aa15.32■□□□□ 0.04
CPNE3-205ENST00000522240 ENAHQ8N8S7 591 aaPredicted RBP15.32■□□□□ 0.04
CPNE3-205ENST00000522240 ANKS1AQ92625 1134 aa15.32■□□□□ 0.04
CPNE3-205ENST00000522240 CHMP4CQ96CF2 233 aa15.32■□□□□ 0.04
CPNE3-205ENST00000522240 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.32■□□□□ 0.04
CPNE3-205ENST00000522240 IGKV6D-41A0A0C4DH26 115 aa15.31■□□□□ 0.04
CPNE3-205ENST00000522240 KLF18A0A0U1RQI7 1052 aa15.31■□□□□ 0.04
CPNE3-205ENST00000522240 CCDC69A6NI79 296 aa15.31■□□□□ 0.04
CPNE3-205ENST00000522240 POTECB2RU33 542 aa15.31■□□□□ 0.04
CPNE3-205ENST00000522240 LARGE1O95461 756 aa15.31■□□□□ 0.04
CPNE3-205ENST00000522240 AKR1B1P15121 316 aa15.31■□□□□ 0.04
CPNE3-205ENST00000522240 NOVP48745 357 aa15.31■□□□□ 0.04
CPNE3-205ENST00000522240 ME3Q16798 604 aa15.31■□□□□ 0.04
CPNE3-205ENST00000522240 CERKLQ49MI3 558 aaPredicted RBP15.31■□□□□ 0.04
CPNE3-205ENST00000522240 IFIT1BQ5T764 474 aaKnown RBP15.31■□□□□ 0.04
CPNE3-205ENST00000522240 APOA5Q6Q788 366 aa15.31■□□□□ 0.04
CPNE3-205ENST00000522240 DCPSQ96C86 337 aaKnown RBP15.31■□□□□ 0.04
CPNE3-205ENST00000522240 INTS4Q96HW7 963 aaKnown RBP15.31■□□□□ 0.04
CPNE3-205ENST00000522240 ZKSCAN3Q9BRR0 538 aa15.31■□□□□ 0.04
CPNE3-205ENST00000522240 GPHNQ9NQX3 736 aaPredicted RBP15.31■□□□□ 0.04
CPNE3-205ENST00000522240 SSC5DA1L4H1 1573 aa15.3■□□□□ 0.04
CPNE3-205ENST00000522240 FAM196BA6NMK8 535 aa15.3■□□□□ 0.04
CPNE3-205ENST00000522240 GOLGA8BA8MQT2 603 aa15.3■□□□□ 0.04
CPNE3-205ENST00000522240 PFKFB2O60825 505 aa15.3■□□□□ 0.04
CPNE3-205ENST00000522240 DCAF15Q66K64 600 aa15.3■□□□□ 0.04
CPNE3-205ENST00000522240 NFXL1Q6ZNB6 911 aa15.3■□□□□ 0.04
CPNE3-205ENST00000522240 TMEM179Q6ZVK1 233 aa15.3■□□□□ 0.04
CPNE3-205ENST00000522240 SULF1Q8IWU6 871 aa15.3■□□□□ 0.04
CPNE3-205ENST00000522240 CDAN1Q8IWY9 1227 aa15.3■□□□□ 0.04
CPNE3-205ENST00000522240 GTF3C6Q969F1 213 aa15.3■□□□□ 0.04
CPNE3-205ENST00000522240 ATAD5Q96QE3 1844 aa15.3■□□□□ 0.04
CPNE3-205ENST00000522240 PAPPA2Q9BXP8 1791 aa15.3■□□□□ 0.04
CPNE3-205ENST00000522240 IL17RBQ9NRM6 502 aa15.3■□□□□ 0.04
CPNE3-205ENST00000522240 GINM1Q9NU53 330 aa15.3■□□□□ 0.04
CPNE3-205ENST00000522240 BRPF3Q9ULD4 1205 aa15.3■□□□□ 0.04
CPNE3-205ENST00000522240 DOCK1Q14185 1865 aa15.29■□□□□ 0.04
CPNE3-205ENST00000522240 DDAH1O94760 285 aa15.29■□□□□ 0.04
CPNE3-205ENST00000522240 HSP90AA1P07900 732 aaKnown RBP15.29■□□□□ 0.04
CPNE3-205ENST00000522240 PDIA3P30101 505 aaKnown RBP15.29■□□□□ 0.04
CPNE3-205ENST00000522240 HTRA3P83110 453 aa15.29■□□□□ 0.04
CPNE3-205ENST00000522240 RCSD1Q6JBY9 416 aa15.29■□□□□ 0.04
CPNE3-205ENST00000522240 SYNE3Q6ZMZ3 975 aa15.29■□□□□ 0.04
CPNE3-205ENST00000522240 LARP6Q9BRS8 491 aaKnown RBP15.29■□□□□ 0.04
CPNE3-205ENST00000522240 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.29■□□□□ 0.04
CPNE3-205ENST00000522240 SLKQ9H2G2 1235 aaPredicted RBP15.29■□□□□ 0.04
CPNE3-205ENST00000522240 SLC12A7Q9Y666 1083 aa15.29■□□□□ 0.04
CPNE3-205ENST00000522240 ZBTB43O43298 467 aa15.28■□□□□ 0.04
CPNE3-205ENST00000522240 NMT2O60551 498 aa15.28■□□□□ 0.04
CPNE3-205ENST00000522240 CALM1P0DP23 149 aa15.28■□□□□ 0.04
CPNE3-205ENST00000522240 CALM2P0DP24 149 aa15.28■□□□□ 0.04
CPNE3-205ENST00000522240 CALM3P0DP25 149 aa15.28■□□□□ 0.04
CPNE3-205ENST00000522240 ST3GAL1Q11201 340 aa15.28■□□□□ 0.04
CPNE3-205ENST00000522240 ABCB5Q2M3G0 1257 aa15.28■□□□□ 0.04
CPNE3-205ENST00000522240 SUPT20HL1Q3ZLR7 823 aa15.28■□□□□ 0.04
CPNE3-205ENST00000522240 CATIPQ7Z7H3 387 aa15.28■□□□□ 0.04
CPNE3-205ENST00000522240 ZNF654Q8IZM8 581 aa15.28■□□□□ 0.04
CPNE3-205ENST00000522240 CEP95Q96GE4 821 aa15.28■□□□□ 0.04
CPNE3-205ENST00000522240 KAT14Q9H8E8 782 aa15.28■□□□□ 0.04
CPNE3-205ENST00000522240 SENP2Q9HC62 589 aa15.28■□□□□ 0.04
CPNE3-205ENST00000522240 MTMR4Q9NYA4 1195 aa15.28■□□□□ 0.04
CPNE3-205ENST00000522240 HPS5Q9UPZ3 1129 aa15.28■□□□□ 0.04
CPNE3-205ENST00000522240 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.28■□□□□ 0.04
CPNE3-205ENST00000522240 MPHOSPH10O00566 681 aaKnown RBP15.27■□□□□ 0.04
CPNE3-205ENST00000522240 SLURP2P0DP57 97 aa15.27■□□□□ 0.04
CPNE3-205ENST00000522240 TOP1P11387 765 aaKnown RBP15.27■□□□□ 0.04
CPNE3-205ENST00000522240 SLC4A3P48751 1232 aa15.27■□□□□ 0.04
CPNE3-205ENST00000522240 METAP2P50579 478 aaKnown RBP eCLIP15.27■□□□□ 0.04
CPNE3-205ENST00000522240 PPP2R5BQ15173 497 aa15.27■□□□□ 0.04
CPNE3-205ENST00000522240 NBPF12Q5TAG4 269 aaPredicted RBP15.27■□□□□ 0.04
CPNE3-205ENST00000522240 KRT26Q7Z3Y9 468 aa15.27■□□□□ 0.04
CPNE3-205ENST00000522240 CCDC83Q8IWF9 413 aa15.27■□□□□ 0.04
CPNE3-205ENST00000522240 MAP3K14Q99558 947 aa15.27■□□□□ 0.04
CPNE3-205ENST00000522240 ZNF341Q9BYN7 854 aa15.27■□□□□ 0.04
CPNE3-205ENST00000522240 CABP5Q9NP86 173 aa15.27■□□□□ 0.04
CPNE3-205ENST00000522240 SYNPO2Q9UMS6 1093 aa15.27■□□□□ 0.04
CPNE3-205ENST00000522240 SCAF8Q9UPN6 1271 aaKnown RBP15.27■□□□□ 0.04
CPNE3-205ENST00000522240 POLR2AP24928 1970 aaKnown RBP15.27■□□□□ 0.03
CPNE3-205ENST00000522240 MYH4Q9Y623 1939 aa15.27■□□□□ 0.03
CPNE3-205ENST00000522240 GOLGA8AA7E2F4 631 aa15.26■□□□□ 0.03
CPNE3-205ENST00000522240 DHX16O60231 1041 aaKnown RBP15.26■□□□□ 0.03
CPNE3-205ENST00000522240 GDF11O95390 407 aa15.26■□□□□ 0.03
CPNE3-205ENST00000522240 TTLL1O95922 423 aa15.26■□□□□ 0.03
CPNE3-205ENST00000522240 SCRN1Q12765 414 aa15.26■□□□□ 0.03
CPNE3-205ENST00000522240 STK3Q13188 491 aa15.26■□□□□ 0.03
CPNE3-205ENST00000522240 EAPPQ56P03 285 aaPredicted RBP15.26■□□□□ 0.03
CPNE3-205ENST00000522240 MICU3Q86XE3 530 aa15.26■□□□□ 0.03
CPNE3-205ENST00000522240 PNMA1Q8ND90 353 aa15.26■□□□□ 0.03
CPNE3-205ENST00000522240 LLPHQ9BRT6 129 aaKnown RBP15.26■□□□□ 0.03
CPNE3-205ENST00000522240 KANSL2Q9H9L4 492 aa15.26■□□□□ 0.03
CPNE3-205ENST00000522240 NYAP2Q9P242 653 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms