RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 TSGA10IPQ3SY00 556 aa15.46■□□□□ 0.06
SYNPO-205ENST00000522122 LINC00301Q8NCQ3 95 aa15.46■□□□□ 0.06
SYNPO-205ENST00000522122 FBXO18Q8NFZ0 1043 aa15.46■□□□□ 0.06
SYNPO-205ENST00000522122 NAP1L4Q99733 375 aaKnown RBP15.46■□□□□ 0.06
SYNPO-205ENST00000522122 TSPOAP1O95153 1857 aa15.45■□□□□ 0.06
SYNPO-205ENST00000522122 PRAMEF22A3QJZ6 481 aa15.45■□□□□ 0.06
SYNPO-205ENST00000522122 PPP6R2O75170 966 aa15.45■□□□□ 0.06
SYNPO-205ENST00000522122 TEX11Q8IYF3 940 aa15.45■□□□□ 0.06
SYNPO-205ENST00000522122 TRMT44Q8IYL2 757 aaKnown RBP15.45■□□□□ 0.06
SYNPO-205ENST00000522122 TAB2Q9NYJ8 693 aa15.45■□□□□ 0.06
SYNPO-205ENST00000522122 RAPGEF1Q13905 1077 aa15.45■□□□□ 0.06
SYNPO-205ENST00000522122 HOMER2Q9NSB8 354 aa15.45■□□□□ 0.06
SYNPO-205ENST00000522122 MAST3O60307 1309 aa15.45■□□□□ 0.06
SYNPO-205ENST00000522122 M0R2C6 588 aa15.45■□□□□ 0.06
SYNPO-205ENST00000522122 BTG4Q9NY30 223 aa15.45■□□□□ 0.06
SYNPO-205ENST00000522122 SERTAD1Q9UHV2 236 aa15.45■□□□□ 0.06
SYNPO-205ENST00000522122 KIF4AO95239 1232 aa15.44■□□□□ 0.06
SYNPO-205ENST00000522122 JAKMIP2Q96AA8 810 aa15.44■□□□□ 0.06
SYNPO-205ENST00000522122 BPIFA3Q9BQP9 254 aa15.44■□□□□ 0.06
SYNPO-205ENST00000522122 IL25Q9H293 177 aa15.44■□□□□ 0.06
SYNPO-205ENST00000522122 TLDC2A0PJX2 215 aa15.44■□□□□ 0.06
SYNPO-205ENST00000522122 ADD1P35611 737 aaKnown RBP15.44■□□□□ 0.06
SYNPO-205ENST00000522122 PTPN12Q05209 780 aaKnown RBP15.44■□□□□ 0.06
SYNPO-205ENST00000522122 MROH5Q6ZUA9 1318 aa15.44■□□□□ 0.06
SYNPO-205ENST00000522122 ATP8B1O43520 1251 aa15.44■□□□□ 0.06
SYNPO-205ENST00000522122 SLC39A14Q15043 492 aa15.44■□□□□ 0.06
SYNPO-205ENST00000522122 BRD3Q15059 726 aa15.44■□□□□ 0.06
SYNPO-205ENST00000522122 GRIPAP1Q4V328 841 aa15.44■□□□□ 0.06
SYNPO-205ENST00000522122 CCDC121Q6ZUS5 278 aa15.44■□□□□ 0.06
SYNPO-205ENST00000522122 ANKS4BQ8N8V4 417 aa15.44■□□□□ 0.06
SYNPO-205ENST00000522122 STAMQ92783 540 aa15.44■□□□□ 0.06
SYNPO-205ENST00000522122 TRIML1Q8N9V2 468 aa15.44■□□□□ 0.06
SYNPO-205ENST00000522122 RGS22Q8NE09 1264 aa15.44■□□□□ 0.06
SYNPO-205ENST00000522122 GOLPH3LQ9H4A5 285 aa15.44■□□□□ 0.06
SYNPO-205ENST00000522122 TXKP42681 527 aa15.43■□□□□ 0.06
SYNPO-205ENST00000522122 DCAF17Q5H9S7 520 aaPredicted RBP15.43■□□□□ 0.06
SYNPO-205ENST00000522122 CPLX4Q7Z7G2 160 aa15.43■□□□□ 0.06
SYNPO-205ENST00000522122 FMNL3Q8IVF7 1028 aa15.43■□□□□ 0.06
SYNPO-205ENST00000522122 OGFOD1Q8N543 542 aa15.43■□□□□ 0.06
SYNPO-205ENST00000522122 SLFNL1Q499Z3 407 aa15.43■□□□□ 0.06
SYNPO-205ENST00000522122 VWA3BQ502W6 1294 aa15.43■□□□□ 0.06
SYNPO-205ENST00000522122 C10orf67Q8IYJ2 551 aa15.43■□□□□ 0.06
SYNPO-205ENST00000522122 GPATCH11Q8N954 259 aa15.43■□□□□ 0.06
SYNPO-205ENST00000522122 VPS54Q9P1Q0 977 aa15.43■□□□□ 0.06
SYNPO-205ENST00000522122 MED23Q9ULK4 1368 aa15.43■□□□□ 0.06
SYNPO-205ENST00000522122 MTRF1LQ9UGC7 380 aaKnown RBP15.43■□□□□ 0.06
SYNPO-205ENST00000522122 TECPR2O15040 1411 aa15.43■□□□□ 0.06
SYNPO-205ENST00000522122 CCNT1O60563 726 aaKnown RBP15.43■□□□□ 0.06
SYNPO-205ENST00000522122 FGAP02671 866 aa15.43■□□□□ 0.06
SYNPO-205ENST00000522122 CCDC144BQ3MJ40 725 aa15.43■□□□□ 0.06
SYNPO-205ENST00000522122 C8orf74Q6P047 294 aa15.43■□□□□ 0.06
SYNPO-205ENST00000522122 NOSTRINQ8IVI9 506 aa15.43■□□□□ 0.06
SYNPO-205ENST00000522122 ANKRD7Q92527 254 aa15.43■□□□□ 0.06
SYNPO-205ENST00000522122 CCDC51Q96ER9 411 aa15.43■□□□□ 0.06
SYNPO-205ENST00000522122 SAP30BPQ9UHR5 308 aaKnown RBP15.43■□□□□ 0.06
SYNPO-205ENST00000522122 NONOQ15233 471 aaKnown RBP eCLIP15.42■□□□□ 0.06
SYNPO-205ENST00000522122 ZNF654Q8IZM8 581 aa15.42■□□□□ 0.06
SYNPO-205ENST00000522122 SLF1Q9BQI6 1058 aa15.42■□□□□ 0.06
SYNPO-205ENST00000522122 DDX41Q9UJV9 622 aaKnown RBP15.42■□□□□ 0.06
SYNPO-205ENST00000522122 hCG_1642624A0A1W2PR95 340 aa15.42■□□□□ 0.06
SYNPO-205ENST00000522122 TMEM110-MUSTN1A8MSY1 372 aa15.42■□□□□ 0.06
SYNPO-205ENST00000522122 ARHGEF25Q86VW2 580 aa15.42■□□□□ 0.06
SYNPO-205ENST00000522122 AFAP1L1Q8TED9 768 aa15.42■□□□□ 0.06
SYNPO-205ENST00000522122 ADKP55263 362 aaKnown RBP15.42■□□□□ 0.06
SYNPO-205ENST00000522122 KIF23Q02241 960 aaPredicted RBP15.42■□□□□ 0.06
SYNPO-205ENST00000522122 DHX40Q8IX18 779 aaKnown RBP15.42■□□□□ 0.06
SYNPO-205ENST00000522122 SECISBP2LQ93073 1101 aaKnown RBP15.42■□□□□ 0.06
SYNPO-205ENST00000522122 SELENOSQ9BQE4 189 aa15.42■□□□□ 0.06
SYNPO-205ENST00000522122 AATFQ9NY61 560 aaKnown RBP eCLIP15.42■□□□□ 0.06
SYNPO-205ENST00000522122 HDAC9Q9UKV0 1011 aa15.42■□□□□ 0.06
SYNPO-205ENST00000522122 WWC3Q9ULE0 1092 aa15.42■□□□□ 0.06
SYNPO-205ENST00000522122 CETN3O15182 167 aa15.42■□□□□ 0.06
SYNPO-205ENST00000522122 MAGEA1P43355 309 aa15.42■□□□□ 0.06
SYNPO-205ENST00000522122 KRT25Q7Z3Z0 450 aa15.42■□□□□ 0.06
SYNPO-205ENST00000522122 FBF1Q8TES7 1133 aa15.42■□□□□ 0.06
SYNPO-205ENST00000522122 PAIP2Q9BPZ3 127 aaKnown RBP15.42■□□□□ 0.06
SYNPO-205ENST00000522122 AGLP35573 1532 aa15.42■□□□□ 0.06
SYNPO-205ENST00000522122 ATP2A1O14983 1001 aa15.41■□□□□ 0.06
SYNPO-205ENST00000522122 CCDC26Q8TAB7 109 aa15.41■□□□□ 0.06
SYNPO-205ENST00000522122 NELFBQ8WX92 580 aa15.41■□□□□ 0.06
SYNPO-205ENST00000522122 IMPG2Q9BZV3 1241 aa15.41■□□□□ 0.06
SYNPO-205ENST00000522122 GPCPD1Q9NPB8 672 aa15.41■□□□□ 0.06
SYNPO-205ENST00000522122 LRWD1Q9UFC0 647 aa15.41■□□□□ 0.06
SYNPO-205ENST00000522122 ERVV-2B6SEH9 535 aa15.41■□□□□ 0.06
SYNPO-205ENST00000522122 LRRC24Q50LG9 513 aa15.41■□□□□ 0.06
SYNPO-205ENST00000522122 STX10O60499 249 aa15.41■□□□□ 0.06
SYNPO-205ENST00000522122 SYNCQ9H7C4 482 aa15.41■□□□□ 0.06
SYNPO-205ENST00000522122 FANCLQ9NW38 375 aa15.41■□□□□ 0.06
SYNPO-205ENST00000522122 GTF2A1P52655 376 aaPredicted RBP15.41■□□□□ 0.06
SYNPO-205ENST00000522122 WDR66Q8TBY9 1149 aa15.41■□□□□ 0.06
SYNPO-205ENST00000522122 OSBPL5Q9H0X9 879 aaPredicted RBP15.41■□□□□ 0.06
SYNPO-205ENST00000522122 RASSF4Q9H2L5 321 aa15.41■□□□□ 0.06
SYNPO-205ENST00000522122 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.41■□□□□ 0.06
SYNPO-205ENST00000522122 ATP6V0A2Q9Y487 856 aa15.41■□□□□ 0.06
SYNPO-205ENST00000522122 EPB41P11171 864 aaKnown RBP15.4■□□□□ 0.06
SYNPO-205ENST00000522122 SLC9C1Q4G0N8 1177 aa15.4■□□□□ 0.06
SYNPO-205ENST00000522122 FBXO38Q6PIJ6 1188 aa15.4■□□□□ 0.06
SYNPO-205ENST00000522122 TTLL7Q6ZT98 887 aa15.4■□□□□ 0.06
SYNPO-205ENST00000522122 CCDC84Q86UT8 332 aaPredicted RBP15.4■□□□□ 0.06
SYNPO-205ENST00000522122 KCNB2Q92953 911 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms