RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 KAT14Q9H8E8 782 aa25.02■■□□□ 1.6
R3HCC1-208ENST00000522012 RRAGCQ9HB90 399 aa25.02■■□□□ 1.6
R3HCC1-208ENST00000522012 HPS5Q9UPZ3 1129 aa25.02■■□□□ 1.6
R3HCC1-208ENST00000522012 PLIN4Q96Q06 1357 aa25.02■■□□□ 1.6
R3HCC1-208ENST00000522012 RXRAP19793 462 aa25.02■■□□□ 1.6
R3HCC1-208ENST00000522012 SHROOM1Q2M3G4 852 aaPredicted RBP25.02■■□□□ 1.6
R3HCC1-208ENST00000522012 ZNF526Q8TF50 670 aaPredicted RBP25.02■■□□□ 1.6
R3HCC1-208ENST00000522012 INTS4Q96HW7 963 aaKnown RBP25.02■■□□□ 1.6
R3HCC1-208ENST00000522012 NCOA5Q9HCD5 579 aaKnown RBP25.02■■□□□ 1.6
R3HCC1-208ENST00000522012 CABP5Q9NP86 173 aa25.02■■□□□ 1.6
R3HCC1-208ENST00000522012 SIPA1L1O43166 1804 aa25.01■■□□□ 1.59
R3HCC1-208ENST00000522012 IGKV6D-41A0A0C4DH26 115 aa25.01■■□□□ 1.59
R3HCC1-208ENST00000522012 ADM5C9JUS6 153 aa25.01■■□□□ 1.59
R3HCC1-208ENST00000522012 METAP2P50579 478 aaKnown RBP eCLIP25.01■■□□□ 1.59
R3HCC1-208ENST00000522012 KRT26Q7Z3Y9 468 aa25.01■■□□□ 1.59
R3HCC1-208ENST00000522012 CCDC144CPQ8IYA2 1237 aa25.01■■□□□ 1.59
R3HCC1-208ENST00000522012 NUP133Q8WUM0 1156 aa25.01■■□□□ 1.59
R3HCC1-208ENST00000522012 MTMR4Q9NYA4 1195 aa25.01■■□□□ 1.59
R3HCC1-208ENST00000522012 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.01■■□□□ 1.59
R3HCC1-208ENST00000522012 GOLGA8AA7E2F4 631 aa25■■□□□ 1.59
R3HCC1-208ENST00000522012 GH2P01242 217 aa25■■□□□ 1.59
R3HCC1-208ENST00000522012 VEGFAP15692 232 aaPredicted RBP25■■□□□ 1.59
R3HCC1-208ENST00000522012 DCAF15Q66K64 600 aa25■■□□□ 1.59
R3HCC1-208ENST00000522012 TMEM179Q6ZVK1 233 aa25■■□□□ 1.59
R3HCC1-208ENST00000522012 CLEC11AQ9Y240 323 aa25■■□□□ 1.59
R3HCC1-208ENST00000522012 JAG1P78504 1218 aa24.99■■□□□ 1.59
R3HCC1-208ENST00000522012 SUPT20HL1Q3ZLR7 823 aa24.99■■□□□ 1.59
R3HCC1-208ENST00000522012 CLEC10AQ8IUN9 316 aa24.99■■□□□ 1.59
R3HCC1-208ENST00000522012 TMEM47Q9BQJ4 181 aa24.99■■□□□ 1.59
R3HCC1-208ENST00000522012 WDR90Q96KV7 1748 aa24.98■■□□□ 1.59
R3HCC1-208ENST00000522012 ATP2B2Q01814 1243 aa24.98■■□□□ 1.59
R3HCC1-208ENST00000522012 SEPT2Q15019 361 aa24.98■■□□□ 1.59
R3HCC1-208ENST00000522012 RAB3GAP1Q15042 981 aa24.98■■□□□ 1.59
R3HCC1-208ENST00000522012 PPP4R3BQ5MIZ7 849 aa24.98■■□□□ 1.59
R3HCC1-208ENST00000522012 DLK2Q6UY11 383 aa24.98■■□□□ 1.59
R3HCC1-208ENST00000522012 USP48Q86UV5 1035 aa24.98■■□□□ 1.59
R3HCC1-208ENST00000522012 CHMP4CQ96CF2 233 aa24.98■■□□□ 1.59
R3HCC1-208ENST00000522012 KANSL2Q9H9L4 492 aa24.98■■□□□ 1.59
R3HCC1-208ENST00000522012 CLIP2Q9UDT6 1046 aa24.98■■□□□ 1.59
R3HCC1-208ENST00000522012 DHX16O60231 1041 aaKnown RBP24.97■■□□□ 1.59
R3HCC1-208ENST00000522012 DTNBO60941 627 aa24.97■■□□□ 1.59
R3HCC1-208ENST00000522012 TTLL1O95922 423 aa24.97■■□□□ 1.59
R3HCC1-208ENST00000522012 TOP1P11387 765 aaKnown RBP24.97■■□□□ 1.59
R3HCC1-208ENST00000522012 NOVP48745 357 aa24.97■■□□□ 1.59
R3HCC1-208ENST00000522012 PNMA1Q8ND90 353 aa24.97■■□□□ 1.59
R3HCC1-208ENST00000522012 ZNF341Q9BYN7 854 aa24.97■■□□□ 1.59
R3HCC1-208ENST00000522012 SMC3Q9UQE7 1217 aa24.97■■□□□ 1.59
R3HCC1-208ENST00000522012 PHF20L1A8MW92 1017 aa24.96■■□□□ 1.59
R3HCC1-208ENST00000522012 DDAH1O94760 285 aa24.96■■□□□ 1.59
R3HCC1-208ENST00000522012 CALM1P0DP23 149 aa24.96■■□□□ 1.59
R3HCC1-208ENST00000522012 CALM2P0DP24 149 aa24.96■■□□□ 1.59
R3HCC1-208ENST00000522012 CALM3P0DP25 149 aa24.96■■□□□ 1.59
R3HCC1-208ENST00000522012 GUCY1A2P33402 732 aa24.96■■□□□ 1.59
R3HCC1-208ENST00000522012 CAP2P40123 477 aa24.96■■□□□ 1.59
R3HCC1-208ENST00000522012 RCAN1P53805 252 aa24.96■■□□□ 1.59
R3HCC1-208ENST00000522012 CWC22Q9HCG8 908 aaKnown RBP24.96■■□□□ 1.59
R3HCC1-208ENST00000522012 CPLX1O14810 134 aa24.96■■□□□ 1.59
R3HCC1-208ENST00000522012 TROAPQ12815 778 aa24.96■■□□□ 1.59
R3HCC1-208ENST00000522012 RTN1Q16799 776 aa24.96■■□□□ 1.59
R3HCC1-208ENST00000522012 FANCBQ8NB91 859 aa24.96■■□□□ 1.59
R3HCC1-208ENST00000522012 ZBTB21Q9ULJ3 1066 aa24.96■■□□□ 1.59
R3HCC1-208ENST00000522012 MTMR7Q9Y216 660 aa24.96■■□□□ 1.59
R3HCC1-208ENST00000522012 CDC27P30260 824 aa24.95■■□□□ 1.58
R3HCC1-208ENST00000522012 ADD1P35611 737 aaKnown RBP24.95■■□□□ 1.58
R3HCC1-208ENST00000522012 ICA1Q05084 483 aa24.95■■□□□ 1.58
R3HCC1-208ENST00000522012 SCN4AP35499 1836 aa24.95■■□□□ 1.58
R3HCC1-208ENST00000522012 POTEIP0CG38 1075 aa24.94■■□□□ 1.58
R3HCC1-208ENST00000522012 POTEJP0CG39 1038 aa24.94■■□□□ 1.58
R3HCC1-208ENST00000522012 EEF2P13639 858 aaKnown RBP24.94■■□□□ 1.58
R3HCC1-208ENST00000522012 CDC37L1Q7L3B6 337 aa24.94■■□□□ 1.58
R3HCC1-208ENST00000522012 LRRC47Q8N1G4 583 aaKnown RBP24.94■■□□□ 1.58
R3HCC1-208ENST00000522012 LLPHQ9BRT6 129 aaKnown RBP24.94■■□□□ 1.58
R3HCC1-208ENST00000522012 GLIS2Q9BZE0 524 aaPredicted RBP24.94■■□□□ 1.58
R3HCC1-208ENST00000522012 NMRK2Q9NPI5 230 aa24.94■■□□□ 1.58
R3HCC1-208ENST00000522012 NYAP2Q9P242 653 aa24.94■■□□□ 1.58
R3HCC1-208ENST00000522012 CTDNEP1O95476 244 aa24.93■■□□□ 1.58
R3HCC1-208ENST00000522012 PRKG1Q13976 671 aa24.93■■□□□ 1.58
R3HCC1-208ENST00000522012 FAM217BQ9NTX9 383 aaPredicted RBP24.93■■□□□ 1.58
R3HCC1-208ENST00000522012 FZD1Q9UP38 647 aa24.93■■□□□ 1.58
R3HCC1-208ENST00000522012 CCDC196A0A1B0GTZ2 297 aa24.92■■□□□ 1.58
R3HCC1-208ENST00000522012 JAK2O60674 1132 aa24.92■■□□□ 1.58
R3HCC1-208ENST00000522012 CTNND1O60716 968 aaKnown RBP24.92■■□□□ 1.58
R3HCC1-208ENST00000522012 GJB2P29033 226 aa24.92■■□□□ 1.58
R3HCC1-208ENST00000522012 CPLX2Q6PUV4 134 aaKnown RBP24.92■■□□□ 1.58
R3HCC1-208ENST00000522012 NSUN7Q8NE18 718 aaKnown RBP24.92■■□□□ 1.58
R3HCC1-208ENST00000522012 CTCFLQ8NI51 663 aaPredicted RBP24.92■■□□□ 1.58
R3HCC1-208ENST00000522012 CDCA5Q96FF9 252 aa24.92■■□□□ 1.58
R3HCC1-208ENST00000522012 NID2Q14112 1375 aa24.92■■□□□ 1.58
R3HCC1-208ENST00000522012 PPFIA3O75145 1194 aa24.91■■□□□ 1.58
R3HCC1-208ENST00000522012 ASNSP08243 561 aa24.91■■□□□ 1.58
R3HCC1-208ENST00000522012 HSPA6P17066 643 aa24.91■■□□□ 1.58
R3HCC1-208ENST00000522012 PPP2R5BQ15173 497 aa24.91■■□□□ 1.58
R3HCC1-208ENST00000522012 SIAH1Q8IUQ4 282 aa24.91■■□□□ 1.58
R3HCC1-208ENST00000522012 DDX11Q96FC9 970 aa24.91■■□□□ 1.58
R3HCC1-208ENST00000522012 WRNIP1Q96S55 665 aa24.91■■□□□ 1.58
R3HCC1-208ENST00000522012 ZNF112Q9UJU3 913 aa24.91■■□□□ 1.58
R3HCC1-208ENST00000522012 PTPDC1A2A3K4 754 aa24.91■■□□□ 1.58
R3HCC1-208ENST00000522012 INPP5BP32019 993 aa24.91■■□□□ 1.58
R3HCC1-208ENST00000522012 MAP1SQ66K74 1059 aaPredicted RBP24.91■■□□□ 1.58
R3HCC1-208ENST00000522012 RBM28Q9NW13 759 aaKnown RBP24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms