RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 KIF1BPQ96EK5 621 aa25.29■■□□□ 1.64
PABPC1-218ENST00000521865 RIOK1Q9BRS2 568 aaKnown RBP25.29■■□□□ 1.64
PABPC1-218ENST00000521865 CRNKL1Q9BZJ0 848 aaKnown RBP25.29■■□□□ 1.64
PABPC1-218ENST00000521865 PORCNQ9H237 461 aa25.29■■□□□ 1.64
PABPC1-218ENST00000521865 GOLIM4O00461 696 aa25.28■■□□□ 1.64
PABPC1-218ENST00000521865 PLCD1P51178 756 aa25.28■■□□□ 1.64
PABPC1-218ENST00000521865 PLEKHH3Q7Z736 793 aa25.28■■□□□ 1.64
PABPC1-218ENST00000521865 TRMT44Q8IYL2 757 aaKnown RBP25.28■■□□□ 1.64
PABPC1-218ENST00000521865 C12orf42Q96LP6 360 aa25.28■■□□□ 1.64
PABPC1-218ENST00000521865 XRCC5P13010 732 aaKnown RBP25.27■■□□□ 1.64
PABPC1-218ENST00000521865 PDE6AP16499 860 aa25.27■■□□□ 1.64
PABPC1-218ENST00000521865 RGS2P41220 211 aa25.27■■□□□ 1.64
PABPC1-218ENST00000521865 WDR78Q5VTH9 848 aa25.27■■□□□ 1.64
PABPC1-218ENST00000521865 RPAP2Q8IXW5 612 aaPredicted RBP25.27■■□□□ 1.64
PABPC1-218ENST00000521865 NBPF3Q9H094 633 aa25.27■■□□□ 1.64
PABPC1-218ENST00000521865 MCM9Q9NXL9 1143 aa25.27■■□□□ 1.64
PABPC1-218ENST00000521865 FOCADQ5VW36 1801 aa25.27■■□□□ 1.64
PABPC1-218ENST00000521865 MYO5AQ9Y4I1 1855 aaKnown RBP25.26■■□□□ 1.63
PABPC1-218ENST00000521865 MPHOSPH10O00566 681 aaKnown RBP25.26■■□□□ 1.63
PABPC1-218ENST00000521865 SHMT1P34896 483 aa25.26■■□□□ 1.63
PABPC1-218ENST00000521865 CCNA1P78396 465 aa25.26■■□□□ 1.63
PABPC1-218ENST00000521865 ACER1Q8TDN7 264 aa25.26■■□□□ 1.63
PABPC1-218ENST00000521865 KIAA1683Q9H0B3 1180 aa25.26■■□□□ 1.63
PABPC1-218ENST00000521865 DDX19BQ9UMR2 479 aa25.26■■□□□ 1.63
PABPC1-218ENST00000521865 COG6Q9Y2V7 657 aa25.26■■□□□ 1.63
PABPC1-218ENST00000521865 RABGAP1Q9Y3P9 1069 aa25.26■■□□□ 1.63
PABPC1-218ENST00000521865 ZNF532Q9HCE3 1301 aa25.26■■□□□ 1.63
PABPC1-218ENST00000521865 TRIOBPQ9H2D6 2365 aa25.26■■□□□ 1.63
PABPC1-218ENST00000521865 CDK5RAP2Q96SN8 1893 aa25.26■■□□□ 1.63
PABPC1-218ENST00000521865 VCAM1P19320 739 aa25.25■■□□□ 1.63
PABPC1-218ENST00000521865 C7orf61Q8IZ16 206 aa25.25■■□□□ 1.63
PABPC1-218ENST00000521865 C11orf49Q9H6J7 331 aa25.25■■□□□ 1.63
PABPC1-218ENST00000521865 DOCK3Q8IZD9 2030 aa25.24■■□□□ 1.63
PABPC1-218ENST00000521865 GLRX3O76003 335 aaKnown RBP25.24■■□□□ 1.63
PABPC1-218ENST00000521865 MAP3K21Q5TCX8 1036 aa25.24■■□□□ 1.63
PABPC1-218ENST00000521865 CATSPERGQ6ZRH7 1159 aa25.24■■□□□ 1.63
PABPC1-218ENST00000521865 CACNB2Q08289 660 aaPredicted RBP25.23■■□□□ 1.63
PABPC1-218ENST00000521865 SEPT2Q15019 361 aa25.23■■□□□ 1.63
PABPC1-218ENST00000521865 CCL14Q16627 93 aa25.23■■□□□ 1.63
PABPC1-218ENST00000521865 MORN1Q5T089 497 aa25.23■■□□□ 1.63
PABPC1-218ENST00000521865 POTEEQ6S8J3 1075 aa25.23■■□□□ 1.63
PABPC1-218ENST00000521865 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.23■■□□□ 1.63
PABPC1-218ENST00000521865 SDR42E1Q8WUS8 393 aa25.23■■□□□ 1.63
PABPC1-218ENST00000521865 APBA2Q99767 749 aa25.23■■□□□ 1.63
PABPC1-218ENST00000521865 PRO3102Q9H379 93 aa25.23■■□□□ 1.63
PABPC1-218ENST00000521865 RPAP3Q9H6T3 665 aaPredicted RBP25.23■■□□□ 1.63
PABPC1-218ENST00000521865 STAP2Q9UGK3 403 aa25.23■■□□□ 1.63
PABPC1-218ENST00000521865 OGDHLQ9ULD0 1010 aa25.23■■□□□ 1.63
PABPC1-218ENST00000521865 USP6NLQ92738 828 aa25.22■■□□□ 1.63
PABPC1-218ENST00000521865 RAB11FIP3O75154 756 aa25.21■■□□□ 1.63
PABPC1-218ENST00000521865 CNMDO75829 334 aa25.21■■□□□ 1.63
PABPC1-218ENST00000521865 MAP2K5Q13163 448 aa25.21■■□□□ 1.63
PABPC1-218ENST00000521865 LCORLQ8N3X6 602 aa25.21■■□□□ 1.63
PABPC1-218ENST00000521865 EDC3Q96F86 508 aaKnown RBP25.21■■□□□ 1.63
PABPC1-218ENST00000521865 CHMP4BQ9H444 224 aaKnown RBP25.21■■□□□ 1.63
PABPC1-218ENST00000521865 ZBTB40Q9NUA8 1239 aa25.21■■□□□ 1.63
PABPC1-218ENST00000521865 ZMYND8Q9ULU4 1186 aaPredicted RBP25.21■■□□□ 1.63
PABPC1-218ENST00000521865 IVNS1ABPQ9Y6Y0 642 aa25.21■■□□□ 1.63
PABPC1-218ENST00000521865 MYH1P12882 1939 aa25.21■■□□□ 1.63
PABPC1-218ENST00000521865 GUCY1A2P33402 732 aa25.2■■□□□ 1.62
PABPC1-218ENST00000521865 GABPAQ06546 454 aa25.2■■□□□ 1.62
PABPC1-218ENST00000521865 SIRT2Q8IXJ6 389 aa25.2■■□□□ 1.62
PABPC1-218ENST00000521865 BOLA2Q9H3K6 86 aa25.2■■□□□ 1.62
PABPC1-218ENST00000521865 ARMT1Q9H993 441 aa25.2■■□□□ 1.62
PABPC1-218ENST00000521865 DCP1AQ9NPI6 582 aaPredicted RBP25.2■■□□□ 1.62
PABPC1-218ENST00000521865 A0A1W2PPC1 479 aa25.19■■□□□ 1.62
PABPC1-218ENST00000521865 TCRBV5S4A2TA0A5A2 114 aa25.19■■□□□ 1.62
PABPC1-218ENST00000521865 CCND3P30281 292 aaPredicted RBP25.19■■□□□ 1.62
PABPC1-218ENST00000521865 EVX2Q03828 476 aa25.19■■□□□ 1.62
PABPC1-218ENST00000521865 PAG1Q9NWQ8 432 aa25.19■■□□□ 1.62
PABPC1-218ENST00000521865 RANBP2P49792 3224 aaKnown RBP25.18■■□□□ 1.62
PABPC1-218ENST00000521865 SPDYE16A6NNV3 312 aaPredicted RBP25.18■■□□□ 1.62
PABPC1-218ENST00000521865 CYP2D6P10635 497 aa25.18■■□□□ 1.62
PABPC1-218ENST00000521865 MNX1P50219 401 aaPredicted RBP25.18■■□□□ 1.62
PABPC1-218ENST00000521865 MFSD14CQ5VZR4 134 aa25.18■■□□□ 1.62
PABPC1-218ENST00000521865 TANGO6Q9C0B7 1094 aa25.18■■□□□ 1.62
PABPC1-218ENST00000521865 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.18■■□□□ 1.62
PABPC1-218ENST00000521865 BTBD7Q9P203 1132 aa25.18■■□□□ 1.62
PABPC1-218ENST00000521865 PLXNB2O15031 1838 aa25.17■■□□□ 1.62
PABPC1-218ENST00000521865 SLC15A5A6NIM6 579 aa25.17■■□□□ 1.62
PABPC1-218ENST00000521865 MBD4O95243 580 aa25.17■■□□□ 1.62
PABPC1-218ENST00000521865 SYN1P17600 705 aa25.17■■□□□ 1.62
PABPC1-218ENST00000521865 PTPREP23469 700 aa25.17■■□□□ 1.62
PABPC1-218ENST00000521865 LBX2Q6XYB7 198 aa25.17■■□□□ 1.62
PABPC1-218ENST00000521865 SWAP70Q9UH65 585 aa25.17■■□□□ 1.62
PABPC1-218ENST00000521865 A0A1W2PRG0 241 aa25.16■■□□□ 1.62
PABPC1-218ENST00000521865 ATP2B2Q01814 1243 aa25.16■■□□□ 1.62
PABPC1-218ENST00000521865 TMEM179Q6ZVK1 233 aa25.16■■□□□ 1.62
PABPC1-218ENST00000521865 AMOTL1Q8IY63 956 aa25.16■■□□□ 1.62
PABPC1-218ENST00000521865 SLC44A5Q8NCS7 719 aa25.16■■□□□ 1.62
PABPC1-218ENST00000521865 DYNLL2Q96FJ2 89 aa25.16■■□□□ 1.62
PABPC1-218ENST00000521865 PRKAB2O43741 272 aa25.15■■□□□ 1.62
PABPC1-218ENST00000521865 ADD2P35612 726 aa25.15■■□□□ 1.62
PABPC1-218ENST00000521865 COG2Q14746 738 aa25.15■■□□□ 1.62
PABPC1-218ENST00000521865 SLFNL1Q499Z3 407 aa25.15■■□□□ 1.62
PABPC1-218ENST00000521865 LHX8Q68G74 356 aa25.15■■□□□ 1.62
PABPC1-218ENST00000521865 HOXC10Q9NYD6 342 aa25.15■■□□□ 1.62
PABPC1-218ENST00000521865 RCAN3Q9UKA8 241 aa25.15■■□□□ 1.62
PABPC1-218ENST00000521865 ATP5JP18859 108 aa25.14■■□□□ 1.62
PABPC1-218ENST00000521865 CNGA1P29973 690 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms